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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100630g1.4287.mrna |
| Orig protein id | gnl|cribi|Naga_100630g1.4287 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037252.1 | supercontig | KK037252.1:416922..419491 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna9333 ID=rna9333|Name=rna9333|organism=Nannochloropsis gaditana|type=mRNA|length=255bp
ATGTGCAAGCAGAACAATAACACGATCGACCCTGCGGGGCCTAAATTAAT
ATATGAAGCACGCTACTGCGCGCTAGGTCTCTTCGAGAAGGAGAAGAGCT
ACAGAGCTGATGACTTCCACGTGTTTTTTTCGGTTCTGTATTGCCTTCCT
GGGGGGCTTACGGCGAGGCGCGGAACGAGGGCGGGACGTGCCTCTTTCAT
TGTGAGCGAAGTTTTCCACTTTGCTGTCATATGCGACAAGCAAGTATTGC
CATGA back to topprotein sequence of rna9333 >rna9333-protein ID=rna9333-protein|Name=rna9333|organism=Nannochloropsis gaditana|type=polypeptide|length=484bp
MATLTSPLEGLLKGRLQPYQKREKEEESCYAMTEPSTEGEEEDEEREGFA
YDETPSCGMFSPPFPPEDMPPTATSPWFLDDSREEQPTSRHYPSGPTPGG
FAPTQGAQDFDMPSGPSSPSSVAFSLPPPCPSAPHNALPFQQAYYYHQCQ
APQSQATLEARYLQRLRQRRGEAQRGGGRRGVSVVVLPTSSCKPFSHAKH
LQPPGKGRISWKKEGKGNRTSSFPPHRELWEPHGRREGAWWREEANVQSE
ACLGPSVDFMEGGQGAEDIDISEQGDWDMMEEEDEVEEDVEEEVEAEEGD
EEDLESLMASEGGEVQAWQGALYEKEEAGGRSASYPSRPSSATTSVPPSS
SLPPLPRSRRRLSRTRGAAWPPYLLPSLPQPLALKGGTWGAAITCCDCWA
RARMGTWGRRGTGQWVGRWRSSASATSSTTSRTRVGSTGRCTSSSSFGTT
RTWSPSWTLSTPALSPPLTTSILSSNALTRIYTN back to topmRNA from alignment at KK037252.1:416922..419491+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna9333 ID=rna9333|Name=rna9333|organism=Nannochloropsis gaditana|type=mRNA|length=2570bp|location=Sequence derived from alignment at KK037252.1:416922..419491+ (Nannochloropsis gaditana)
CATTCAAACCTCTCACCACGCTTACATTTACTCTCACCATAATTCGTGCC
ACCAGGCAGTGTCGTGGCATTCGGCACATGGCCACGCTCACTTCGCCTCT
GGAGGGGCTTCTGAAAGGGCGCCTCCAGCCTTATCAGAAacgcgagaagg
aggaagaaagttGTTACGCAATGACGGTACGTCGCGAGAGGGGATGAATC
CTGAAGTGAGGCCATTTAAGATTTGTTTGAAGTTGCCGGCATGGCCTTGT
GGTGGGGAATTAGGGGCTGCGGTAATTGCGACGGCTGAACCctggcgaag
ggggaaatcCTACCGTAGACAAACACTGGCATTTCAACCATGTGATGTGT
CTTTTCGTCCCAAGAAACGCAAAATTGACATCAATTAACATTGTTTCGTC
CTTTCCACCTGCAGGAACCCTCcacggaaggggaggaggaagacgaggag
agggaaggatttGCCTACGACGAGACACCTAGCTGTGGCatgttttcccc
tcctttcccccccgaaGATATGCCGCCCACGGCCACTTCGCCCTGGTTTC
TCGACGATTCACGAGAAGAGCAGCCAACTTCGCGGCATTACCCTTCGGGT
CCCACCCCAGGCGGCTTCGCCCCTACGCAGGGTGCTCAAGACTTTGACAT
GCCGtccggcccctcttccccttcctccgtcgccttttcgctccctccgc
cttgtccttccgccccccacAACGCGTTACCTTTCCAGCAAGCGTACTAC
TACCACCAATGCCAAGCCCCCCAGAGCCAAGCGACTTTGGAGGCACGTTA
CTTACAGCGGTTGCGAcagcggagaggggaggcgcagcgagggggaggaa
gaaggggagtgAGTGTGGTGGTCTTGCCCACTTCCTCGTGCAAACCTTTT
TCGCACGCCAAGCACCTGCAACCGCCTGGGAAAGGTCGAATttcctggaa
gaaggaggggaaagggaaccgcacctcctctttccctccgcacAGGGAAC
TATGGGAACCTcatggacggagggagggagcctggtggagggaggaggct
aaCGTCCAGAGCGAGGCGTGCCTGGGCCCTTCTGTGGACttcatggaggg
aggacaaggggcggaggacatcGACATAAGCGAGCAGGGGGACTGGGAta
tgatggaagaggaagacgaggtggaggaggacgtggaggaggaggtggag
gcagaggaaggggacgaagaggactTGGAGTCATTGATGGcgtccgaggg
aggggaggttcaGGCGTGGCAGGGAGCATTatatgagaaggaagaagcgg
gaggccGGTCCgcctcctacccctcccgcccgtcctcggCCACgacctct
gtccctccctcctcctccctcccgcccctaCCACGGTCCAGACGGCGCCT
CTCCCGTACCCGAGGCGCAGCGTGgcccccctacctccttccctccctcc
cccaacccctGGCTTTGAAGGGTGGCACGTGGGGAGCCGCTATCACATGC
TGCGACTGTTGGGCTCGGGCTCGTAtggggacgtgggggaggcgtgggAC
GGGGCAATGGGTCGGAAGGTGGCGATCAAGCGCATCCGCAACGTCTTCGA
CAACATCACGGACGCGCGTCGGATCTACCGGGAGGTGTACATCCTCAAGC
AGCttcggtagggagggagggagggcgggaaagtgGGGAGTTCCTGGCTT
CTTCTCAGGGGGGCTGGCTTGTCATGCCCACGACCGTggcccatcccccc
tcccctcctccctccctcccttcctcccttcctccctccctccctccctc
ccaggcacCACCCGAACAtggtctccctcctggaCATTGTCCACCCCggc
cctttctccgcctttaACGACCTCTATCTTGTCTTCGAATGCCTTGACAC
GGATCTATACAAATTGATCCTGTCGCCCCAGCAACTCTCGGACGAGCACA
TTCAAGCCTTTGTCTACCAGCTGCTTTTGTCCCTCAAGTATCTGCAGTCT
GCCCACGTCATTCATCGGtacgcccccccgccctccctccttccctccct
ttccacccatcctccctccaacccttCCCCCGCATCTCTTATCGCTCACC
TGACCTATTCTcttttacctccctccctccctccctcccgccggcccTCA
GGGACTTGAAACCGGCCAACATCCTCCTCAACGAAGACTGCTCCCTCAAG
CTCTGTGACTTTGGCCTCGCCCGTGTGGTTAACCACCACTGTGTCCGTGC
TGCCCCGGCGCCGGGTTGTCGGCAGCAATCGCCGTCGCCGGAAGACACCG
AGGACGACGctcaagcctcctccccgaccttGGACGGACGTGGCTACCAA
GCTCCCTCGCCttgtgccctcccttcttccctctctcgccctcgATTGGT
GCGTCGGCAGATGTCTGAATGCGCTTTGAACGAGGAAGTAGTGGCGGCTG
CCGGGATGggtgccccgccctccgtcccgccctctgTCCCGCCCTTGGTC
AAGTCCTtgggcccccctcctcgcctgaCACGGCAACTTACCAAACACGT
GGTGACCCGGTGGTACCGgt back to topCoding sequence (CDS) from alignment at KK037252.1:416922..419491+ >rna9333 ID=rna9333|Name=rna9333|organism=Nannochloropsis gaditana|type=CDS|length=4365bp|location=Sequence derived from alignment at KK037252.1:416922..419491+ (Nannochloropsis gaditana)
ATGGCCACGCTCACTTCGCCTCTGGAGGGGCTTCTGAAAGGGCGCCTCCA
GCCTTATCAGAAacgcgagaaggaggaagaaagttGTTACGCAATGACGG
AACCCTCcacggaaggggaggaggaagacgaggagagggaaggatttGCC
TACGACGAGACACCTAGCTGTGGCatgttttcccctcctttcccccccga
aGATATGCCGCCCACGGCCACTTCGCCCTGGTTTCTCGACGATTCACGAG
AAGAGCAGCCAACTTCGCGGCATTACCCTTCGGGTCCCACCCCAGGCGGC
TTCGCCCCTACGCAGGGTGCTCAAGACTTTGACATGCCGtccggcccctc
ttccccttcctccgtcgccttttcgctccctccgccttgtccttccgccc
cccacAACGCGTTACCTTTCCAGCAAGCGTACTACTACCACCAATGCCAA
GCCCCCCAGAGCCAAGCGACTTTGGAGGCACGTTACTTACAGCGGTTGCG
AcagcggagaggggaggcgcagcgagggggaggaagaaggggagtgAGTG
TGGTGGTCTTGCCCACTTCCTCGTGCAAACCTTTTTCGCACGCCAAGCAC
CTGCAACCGCCTGGGAAAGGTCGAATttcctggaagaaggaggggaaagg
gaaccgcacctcctctttccctccgcacAGGGAACTATGGGAACCTcatg
gacggagggagggagcctggtggagggaggaggctaaCGTCCAGAGCGAG
GCGTGCCTGGGCCCTTCTGTGGACttcatggagggaggacaaggggcgga
ggacatcGACATAAGCGAGCAGGGGGACTGGGAtatgatggaagaggaag
acgaggtggaggaggacgtggaggaggaggtggaggcagaggaaggggac
gaagaggactTGGAGTCATTGATGGcgtccgagggaggggaggttcaGGC
GTGGCAGGGAGCATTatatgagaaggaagaagcgggaggccGGTCCgcct
cctacccctcccgcccgtcctcggCCACgacctctgtccctccctcctcc
tccctcccgcccctaCCACGGTCCAGACGGCGCCTCTCCCGTACCCGAGG
CGCAGCGTGgcccccctacctccttccctccctcccccaacccctGGCTT
TGAAGGGTGGCACGTGGGGAGCCGCTATCACATGCTGCGACTGTTGGGCT
CGGGCTCGTAtggggacgtgggggaggcgtgggACGGGGCAATGGGTCGG
AAGGTGGCGATCAAGCGCATCCGCAACGTCTTCGACAACATCACGGACGC
GCGTCGGATCTACCGGGAGGTGTACATCCTCAAGCAGCttcggcacCACC
CGAACAtggtctccctcctggaCATTGTCCACCCCggccctttctccgcc
tttaACGACCTCTATCTTGTCTTCGAATGCCTTGACACGGATCTATACAA
ATTGAATGGCCACGCTCACTTCGCCTCTGGAGGGGCTTCTGAAAGGGCGC
CTCCAGCCTTATCAGAAacgcgagaaggaggaagaaagttGTTACGCAAT
GACGGAACCCTCcacggaaggggaggaggaagacgaggagagggaaggat
ttGCCTACGACGAGACACCTAGCTGTGGCatgttttcccctcctttcccc
cccgaaGATATGCCGCCCACGGCCACTTCGCCCTGGTTTCTCGACGATTC
ACGAGAAGAGCAGCCAACTTCGCGGCATTACCCTTCGGGTCCCACCCCAG
GCGGCTTCGCCCCTACGCAGGGTGCTCAAGACTTTGACATGCCGtccggc
ccctcttccccttcctccgtcgccttttcgctccctccgccttgtccttc
cgccccccacAACGCGTTACCTTTCCAGCAAGCGTACTACTACCACCAAT
GCCAAGCCCCCCAGAGCCAAGCGACTTTGGAGGCACGTTACTTACAGCGG
TTGCGAcagcggagaggggaggcgcagcgagggggaggaagaaggggagt
gAGTGTGGTGGTCTTGCCCACTTCCTCGTGCAAACCTTTTTCGCACGCCA
AGCACCTGCAACCGCCTGGGAAAGGTCGAATttcctggaagaaggagggg
aaagggaaccgcacctcctctttccctccgcacAGGGAACTATGGGAACC
TcatggacggagggagggagcctggtggagggaggaggctaaCGTCCAGA
GCGAGGCGTGCCTGGGCCCTTCTGTGGACttcatggagggaggacaaggg
gcggaggacatcGACATAAGCGAGCAGGGGGACTGGGAtatgatggaaga
ggaagacgaggtggaggaggacgtggaggaggaggtggaggcagaggaag
gggacgaagaggactTGGAGTCATTGATGGcgtccgagggaggggaggtt
caGGCGTGGCAGGGAGCATTatatgagaaggaagaagcgggaggccGGTC
CgcctcctacccctcccgcccgtcctcggCCACgacctctgtccctccct
cctcctccctcccgcccctaCCACGGTCCAGACGGCGCCTCTCCCGTACC
CGAGGCGCAGCGTGgcccccctacctccttccctccctcccccaacccct
GGCTTTGAAGGGTGGCACGTGGGGAGCCGCTATCACATGCTGCGACTGTT
GGGCTCGGGCTCGTAtggggacgtgggggaggcgtgggACGGGGCAATGG
GTCGGAAGGTGGCGATCAAGCGCATCCGCAACGTCTTCGACAACATCACG
GACGCGCGTCGGATCTACCGGGAGGTGTACATCCTCAAGCAGCttcggca
cCACCCGAACAtggtctccctcctggaCATTGTCCACCCCggccctttct
ccgcctttaACGACCTCTATCTTGTCTTCGAATGCCTTGACACGGATCTA
TACAAATTGAATGGCCACGCTCACTTCGCCTCTGGAGGGGCTTCTGAAAG
GGCGCCTCCAGCCTTATCAGAAacgcgagaaggaggaagaaagttGTTAC
GCAATGACGGAACCCTCcacggaaggggaggaggaagacgaggagaggga
aggatttGCCTACGACGAGACACCTAGCTGTGGCatgttttcccctcctt
tcccccccgaaGATATGCCGCCCACGGCCACTTCGCCCTGGTTTCTCGAC
GATTCACGAGAAGAGCAGCCAACTTCGCGGCATTACCCTTCGGGTCCCAC
CCCAGGCGGCTTCGCCCCTACGCAGGGTGCTCAAGACTTTGACATGCCGt
ccggcccctcttccccttcctccgtcgccttttcgctccctccgccttgt
ccttccgccccccacAACGCGTTACCTTTCCAGCAAGCGTACTACTACCA
CCAATGCCAAGCCCCCCAGAGCCAAGCGACTTTGGAGGCACGTTACTTAC
AGCGGTTGCGAcagcggagaggggaggcgcagcgagggggaggaagaagg
ggagtgAGTGTGGTGGTCTTGCCCACTTCCTCGTGCAAACCTTTTTCGCA
CGCCAAGCACCTGCAACCGCCTGGGAAAGGTCGAATttcctggaagaagg
aggggaaagggaaccgcacctcctctttccctccgcacAGGGAACTATGG
GAACCTcatggacggagggagggagcctggtggagggaggaggctaaCGT
CCAGAGCGAGGCGTGCCTGGGCCCTTCTGTGGACttcatggagggaggac
aaggggcggaggacatcGACATAAGCGAGCAGGGGGACTGGGAtatgatg
gaagaggaagacgaggtggaggaggacgtggaggaggaggtggaggcaga
ggaaggggacgaagaggactTGGAGTCATTGATGGcgtccgagggagggg
aggttcaGGCGTGGCAGGGAGCATTatatgagaaggaagaagcgggaggc
cGGTCCgcctcctacccctcccgcccgtcctcggCCACgacctctgtccc
tccctcctcctccctcccgcccctaCCACGGTCCAGACGGCGCCTCTCCC
GTACCCGAGGCGCAGCGTGgcccccctacctccttccctccctcccccaa
cccctGGCTTTGAAGGGTGGCACGTGGGGAGCCGCTATCACATGCTGCGA
CTGTTGGGCTCGGGCTCGTAtggggacgtgggggaggcgtgggACGGGGC
AATGGGTCGGAAGGTGGCGATCAAGCGCATCCGCAACGTCTTCGACAACA
TCACGGACGCGCGTCGGATCTACCGGGAGGTGTACATCCTCAAGCAGCtt
cggcacCACCCGAACAtggtctccctcctggaCATTGTCCACCCCggccc
tttctccgcctttaACGACCTCTATCTTGTCTTCGAATGCCTTGACACGG
ATCTATACAAATTGA back to top
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