EWM21370.1, cds9303 (CDS) Nannochloropsis gaditana

Overview
NameEWM21370.1
Unique Namecds9303
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037252.1:416999..417097 +
Alignment locationKK037252.1:417336..418578 +
Alignment locationKK037252.1:418726..418838 +

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Properties
Property NameValue
Protein idEWM21370.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100630g1.4287.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037252.1supercontigKK037252.1:416999..417097 +
KK037252.1supercontigKK037252.1:417336..418578 +
KK037252.1supercontigKK037252.1:418726..418838 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
[Close]
BLAST of EWM21370.1 vs. NCBI_GenBank
Match: gi|585101569|gb|EWM21370.1| (hypothetical protein Naga_100630g1 [Nannochloropsis gaditana])

HSP 1 Score: 973.385 bits (2515), Expect = 0.000e+0
Identity = 484/484 (100.00%), Postives = 484/484 (100.00%), Query Frame = 0 
Query:    1 MATLTSPLEGLLKGRLQPYQKREKEEESCYAMTEPSTEGEEEDEEREGFAYDETPSCGMFSPPFPPEDMPPTATSPWFLDDSREEQPTSRHYPSGPTPGGFAPTQGAQDFDMPSGPSSPSSVAFSLPPPCPSAPHNALPFQQAYYYHQCQAPQSQATLEARYLQRLRQRRGEAQRGGGRRGVSVVVLPTSSCKPFSHAKHLQPPGKGRISWKKEGKGNRTSSFPPHRELWEPHGRREGAWWREEANVQSEACLGPSVDFMEGGQGAEDIDISEQGDWDMMEEEDEVEEDVEEEVEAEEGDEEDLESLMASEGGEVQAWQGALYEKEEAGGRSASYPSRPSSATTSVPPSSSLPPLPRSRRRLSRTRGAAWPPYLLPSLPQPLALKGGTWGAAITCCDCWARARMGTWGRRGTGQWVGRWRSSASATSSTTSRTRVGSTGRCTSSSSFGTTRTWSPSWTLSTPALSPPLTTSILSSNALTRIYTN 484
            MATLTSPLEGLLKGRLQPYQKREKEEESCYAMTEPSTEGEEEDEEREGFAYDETPSCGMFSPPFPPEDMPPTATSPWFLDDSREEQPTSRHYPSGPTPGGFAPTQGAQDFDMPSGPSSPSSVAFSLPPPCPSAPHNALPFQQAYYYHQCQAPQSQATLEARYLQRLRQRRGEAQRGGGRRGVSVVVLPTSSCKPFSHAKHLQPPGKGRISWKKEGKGNRTSSFPPHRELWEPHGRREGAWWREEANVQSEACLGPSVDFMEGGQGAEDIDISEQGDWDMMEEEDEVEEDVEEEVEAEEGDEEDLESLMASEGGEVQAWQGALYEKEEAGGRSASYPSRPSSATTSVPPSSSLPPLPRSRRRLSRTRGAAWPPYLLPSLPQPLALKGGTWGAAITCCDCWARARMGTWGRRGTGQWVGRWRSSASATSSTTSRTRVGSTGRCTSSSSFGTTRTWSPSWTLSTPALSPPLTTSILSSNALTRIYTN
Sbjct:    1 MATLTSPLEGLLKGRLQPYQKREKEEESCYAMTEPSTEGEEEDEEREGFAYDETPSCGMFSPPFPPEDMPPTATSPWFLDDSREEQPTSRHYPSGPTPGGFAPTQGAQDFDMPSGPSSPSSVAFSLPPPCPSAPHNALPFQQAYYYHQCQAPQSQATLEARYLQRLRQRRGEAQRGGGRRGVSVVVLPTSSCKPFSHAKHLQPPGKGRISWKKEGKGNRTSSFPPHRELWEPHGRREGAWWREEANVQSEACLGPSVDFMEGGQGAEDIDISEQGDWDMMEEEDEVEEDVEEEVEAEEGDEEDLESLMASEGGEVQAWQGALYEKEEAGGRSASYPSRPSSATTSVPPSSSLPPLPRSRRRLSRTRGAAWPPYLLPSLPQPLALKGGTWGAAITCCDCWARARMGTWGRRGTGQWVGRWRSSASATSSTTSRTRVGSTGRCTSSSSFGTTRTWSPSWTLSTPALSPPLTTSILSSNALTRIYTN 484
[Close]
BLAST of EWM21370.1 vs. NCBI_GenBank
Match: gi|553184984|ref|XP_005854183.1| (hypothetical protein NGA_0239400 [Nannochloropsis gaditana CCMP526] >gi|422294876|gb|EKU22176.1| hypothetical protein NGA_0239400 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 241.891 bits (616), Expect = 7.406e-74
Identity = 153/166 (92.17%), Postives = 154/166 (92.77%), Query Frame = 0 
Query:    1 MATLTSPLEGLLKGRLQPYQKREKEEESCYAMTEPSTEGEEEDEEREGFAYDETPSCGMFSPPFPPEDMPPTATSPWFLDDSREEQPTSRHYPSGPTPGGFAPTQGAQDFDMPSGPSSPSSVAFSLPPPCPSAPHNALPFQQAYYYHQCQAPQSQATLEARYLQRL 166
            MATLTSPLEGLLKGRLQPYQKREKE ESCYAMTEPSTEGEEED+EREGFAYDETPSCGMFSPP PPEDMPPTATSPWFLDD REEQP SRHYPSGPTPGGFAPTQGAQ F MPSGPSSPSSVAFSLPPPCPS PHNALP QQAYYYHQCQAPQSQATLEAR    L
Sbjct:    1 MATLTSPLEGLLKGRLQPYQKREKEAESCYAMTEPSTEGEEEDDEREGFAYDETPSCGMFSPPSPPEDMPPTATSPWFLDDPREEQPPSRHYPSGPTPGGFAPTQGAQGFGMPSGPSSPSSVAFSLPPPCPSGPHNALPSQQAYYYHQCQAPQSQATLEARTYGNL 166
The following BLAST results are available for this feature:
BLAST of EWM21370.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 2
Match NameE-valueIdentityDescription
gi|585101569|gb|EWM21370.1|0.000e+0100.00hypothetical protein Naga_100630g1 [Nannochloropsi... [more]
gi|553184984|ref|XP_005854183.1|7.406e-7492.17hypothetical protein NGA_0239400 [Nannochloropsis ... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9333rna9333Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications