rna933, rna933 (mRNA) Nannochloropsis gaditana

Overview
Namerna933
Unique Namerna933
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length949
Alignment locationCM002456.1:760667..761966 -

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Properties
Property NameValue
Productzinc finger protein
Orig transcript idgnl|cribi|Naga_100022g47.856.mrna
Orig protein idgnl|cribi|Naga_100022g47.856
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002456.1supercontigCM002456.1:760667..761966 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100022g47gene896Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna933rna933-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM29757.1cds933Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna933 ID=rna933|Name=rna933|organism=Nannochloropsis gaditana|type=mRNA|length=949bp
TGCCCGCTCTCCCGCTCATCACGCCTCGAACGCCACGCTGCTCGAGGCTG
TATTACTCGTTCAGTGCTGGAGACATGGCGAGTGGTCGGCTGGCATTGTC
CTCATCGCTTCAGGCTGCCCGCGCCTCGGGAAGCAGCGCCGAGAGGGCGA
CAGCCTGAGGGAGGGCGAGGGGACAGCGCCGCGCCCTAGCGGATAGAGAC
ATCATGACCTTTGGTGGGATGCTTTATCTGTCTCTGACCCGGGCTACTAC
ATCAACAGACATTGTAAGAAAGTAGCATGTTTGCCGCCCGCCGCATTGTT
GCGCATTCCTCGGCGCTCCGGCCTGCATTTACTCATGCCACCGGACGAGC
GCAGGCTCCTACCCGAGTCGTGAGGCGGACATTGGCTGGCCATGGGAGCG
CTCCCCCTGCCACGGGCTGGGAAGGCGAGGTGCGGAAGGTGCTAAAGGAA
GATTGGCAAGTAGTCTGCGGCATTATGGGGTTCTACACGACGCTTTATCT
CGTCTCTAAGCTGTTTTCTGGGGGCAAAAAAGCGGCTCCTGATACTGTGG
CTGCGTCCTCCAGCGCGACCAGCGCGAGCAGTGAGGTCATTTCCATGGCC
GACGACAAGTTCTCTGAGTACGTGGGTAACTCTGAAAACATGCTCAAATG
GGAGCAGAGTTTGAATGATCCGAAAGCTTATGAGTAGAGGGTATGGAGCA
AACGGGAGGAAGTCAGATCCTCTTGCAAGGACAAAGCTGCCGAGAGGGAC
GGGGGATAGCGTCCACCTTTTATTTGTATAGGACACTGGTGCAACCATTC
GAAATTGGGGCTGGAACGGAAAGTGAAGTGACGTTTGGTGAGGGTGGTGG
ACCACCACGTTGGTGGCAAGGAGAATAGAAGGAAGAAAAAGGGGATCGCG
CGTACCTCAATACAACAAGCAAGGACCATCGAAATGCTAGTCGACGTCA
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protein sequence of rna933

>rna933-protein ID=rna933-protein|Name=rna933|organism=Nannochloropsis gaditana|type=polypeptide|length=322bp
MHQRGNKRQRGQGVPRLRAPNNSAGRSPGGATAILEANQSYASDESGNGE
YIEESMVTASAPYTMSNEGRSTRDANYVDLTQERDEPEEEGREEEVEEEV
QVLGVRPGPRRSGRASDSMLRGLFPPPPIRHRSAGMTMRGRGLGGLVAAR
DAAVAFPPELAPLFSHANNLIRLILSQRHGGPTIHRGATEAQISRLPVHF
VPRQARSKKRKASDISTAREKCGATCAAGADVNGILCQTGPGGAAARVGL
GSEAHARDRPAGRETEEEEEGGTCTICLEKYKGGEKLCTLPCAHVYHFKC
CKKWLRTNSVCCICRASIDSTS
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mRNA from alignment at CM002456.1:760667..761966-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna933 ID=rna933|Name=rna933|organism=Nannochloropsis gaditana|type=mRNA|length=1300bp|location=Sequence derived from alignment at CM002456.1:760667..761966- (Nannochloropsis gaditana)
CATGCTCACCCTTTGGTCCCCTCCACTCCATGCGAAACAGGTGGACGCAG
CCTTCTTATGAATGCATCAGCGAGGGAACAAGCGACAACGCGGCCAGGGT
GTTCCGCGCCTTCGTGCTCCCAACAACAGCGCGGGCAGGTCTCCCGGTGG
GGCAACGGCTATTTTGGAAGCTAATCAGAGCTACGCTTCCGATGAAAGTG
GGAATGGAGAGTACATCGAAGAATCCATGGTCACCGCGTCCGCACCTTAC
ACGATGTCGAACGAAGGACGAAGCACTCGAGACGCAAATTACGTCGATCT
GACTCAGGAGAGAGATGAGCCGGAGGAAGAGGGGAGAGAGGAAGAGGTCG
AGGAGGAGGTGCAGGTCCTGGGGGTCAGACCGGGACCACGGCGATCTGGA
CGTGCCTCTGACTCTATGTTGCGCGGTCTCTTTCCGCCCCCCCCGATCCG
GCACCGCTCGGCGGGGATGACAATGAGGGGGCGCGGGCTTGGGGGCCTGG
TGGCTGCTCGCGACGCCGCCGTGGCTTTCCCCCCGGAGCTCGCACCCCTG
TTCTCCCATGCCAATAACCTTATACGCCTCATCTTATCGCAGCGCCACGG
TGGGCCGACGATCCACCGCGGTGCCACGGAAGCCCAGATTTCGCGGCTCC
CTGTTCACTTCGTGCCCCGCCAAGCAAGGAGCAAGAAGCGCAAAGCGTCG
GATATTTCGACTGCTCGGGAAAAATGTGGAGCGACTTGCGCAGCCGGAGC
TGATGTCAATGGTATCCTGTGTCAAACGGGGCCGGGAGGTGCTGCCGCGC
GCGTGGGGCTCGGATCGGAAGCGCATGCCCGTGACAGGCCAGCGGGCCGG
GAGACAGAGGAGGAAGAGGAAGGAGGAACATGCACCATATGCTTGGAGAA
ATATAAGGGTGGAGAAAAGCTTTGTACATTGCCCTGTGCACACGTATATC
ATTTTAAGGTACGTGGTAACGCCGTCGGAGAGTCGGAAATTTTTATTGCA
TAGGGCTCACACTTTTTTTTCACATTGCTTCCCCCTTCCATGTTAGTGCT
GCAAGAAGTGGCTTAGAACCAATAGCGTTTGTTGCATTTGTCGCGCATCG
ATCGACAGTACCTCCTGATCGACGATCGCTCCTCGCATGTGTACACTTAG
GTTCATGCCCTGCGAAGGGCCCTCAGAAGGAGGATTCCATTAAAATGCTT
GTCCGTAAATTAAAGATGTGGAAAGACAACAGGCTCTAGTGTAAAGTCAC
CCTTTAGATGCATGAAAGAAATGAGGTACAGCGCGGATTGTTAGGGTAGG
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Coding sequence (CDS) from alignment at CM002456.1:760667..761966-

>rna933 ID=rna933|Name=rna933|organism=Nannochloropsis gaditana|type=CDS|length=1938bp|location=Sequence derived from alignment at CM002456.1:760667..761966- (Nannochloropsis gaditana)
TGCTGCAAGAAGTGGCTTAGAACCAATAGCGTTTGTTGCATTTGTCGCGC
ATCGATCGACAGTACCTCCTGAATGCATCAGCGAGGGAACAAGCGACAAC
GCGGCCAGGGTGTTCCGCGCCTTCGTGCTCCCAACAACAGCGCGGGCAGG
TCTCCCGGTGGGGCAACGGCTATTTTGGAAGCTAATCAGAGCTACGCTTC
CGATGAAAGTGGGAATGGAGAGTACATCGAAGAATCCATGGTCACCGCGT
CCGCACCTTACACGATGTCGAACGAAGGACGAAGCACTCGAGACGCAAAT
TACGTCGATCTGACTCAGGAGAGAGATGAGCCGGAGGAAGAGGGGAGAGA
GGAAGAGGTCGAGGAGGAGGTGCAGGTCCTGGGGGTCAGACCGGGACCAC
GGCGATCTGGACGTGCCTCTGACTCTATGTTGCGCGGTCTCTTTCCGCCC
CCCCCGATCCGGCACCGCTCGGCGGGGATGACAATGAGGGGGCGCGGGCT
TGGGGGCCTGGTGGCTGCTCGCGACGCCGCCGTGGCTTTCCCCCCGGAGC
TCGCACCCCTGTTCTCCCATGCCAATAACCTTATACGCCTCATCTTATCG
CAGCGCCACGGTGGGCCGACGATCCACCGCGGTGCCACGGAAGCCCAGAT
TTCGCGGCTCCCTGTTCACTTCGTGCCCCGCCAAGCAAGGAGCAAGAAGC
GCAAAGCGTCGGATATTTCGACTGCTCGGGAAAAATGTGGAGCGACTTGC
GCAGCCGGAGCTGATGTCAATGGTATCCTGTGTCAAACGGGGCCGGGAGG
TGCTGCCGCGCGCGTGGGGCTCGGATCGGAAGCGCATGCCCGTGACAGGC
CAGCGGGCCGGGAGACAGAGGAGGAAGAGGAAGGAGGAACATGCACCATA
TGCTTGGAGAAATATAAGGGTGGAGAAAAGCTTTGTACATTGCCCTGTGC
ACACGTATATCATTTTAAGTGCTGCAAGAAGTGGCTTAGAACCAATAGCG
TTTGTTGCATTTGTCGCGCATCGATCGACAGTACCTCCTGAATGCATCAG
CGAGGGAACAAGCGACAACGCGGCCAGGGTGTTCCGCGCCTTCGTGCTCC
CAACAACAGCGCGGGCAGGTCTCCCGGTGGGGCAACGGCTATTTTGGAAG
CTAATCAGAGCTACGCTTCCGATGAAAGTGGGAATGGAGAGTACATCGAA
GAATCCATGGTCACCGCGTCCGCACCTTACACGATGTCGAACGAAGGACG
AAGCACTCGAGACGCAAATTACGTCGATCTGACTCAGGAGAGAGATGAGC
CGGAGGAAGAGGGGAGAGAGGAAGAGGTCGAGGAGGAGGTGCAGGTCCTG
GGGGTCAGACCGGGACCACGGCGATCTGGACGTGCCTCTGACTCTATGTT
GCGCGGTCTCTTTCCGCCCCCCCCGATCCGGCACCGCTCGGCGGGGATGA
CAATGAGGGGGCGCGGGCTTGGGGGCCTGGTGGCTGCTCGCGACGCCGCC
GTGGCTTTCCCCCCGGAGCTCGCACCCCTGTTCTCCCATGCCAATAACCT
TATACGCCTCATCTTATCGCAGCGCCACGGTGGGCCGACGATCCACCGCG
GTGCCACGGAAGCCCAGATTTCGCGGCTCCCTGTTCACTTCGTGCCCCGC
CAAGCAAGGAGCAAGAAGCGCAAAGCGTCGGATATTTCGACTGCTCGGGA
AAAATGTGGAGCGACTTGCGCAGCCGGAGCTGATGTCAATGGTATCCTGT
GTCAAACGGGGCCGGGAGGTGCTGCCGCGCGCGTGGGGCTCGGATCGGAA
GCGCATGCCCGTGACAGGCCAGCGGGCCGGGAGACAGAGGAGGAAGAGGA
AGGAGGAACATGCACCATATGCTTGGAGAAATATAAGGGTGGAGAAAAGC
TTTGTACATTGCCCTGTGCACACGTATATCATTTTAAG
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Synonyms
Publications