rna9326, rna9326 (mRNA) Nannochloropsis gaditana

Overview
Namerna9326
Unique Namerna9326
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1678
Alignment locationKK037252.1:394413..395235 +

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100424g1.4522.mrna
Orig protein idgnl|cribi|Naga_100424g1.4522
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037252.1supercontigKK037252.1:394413..395235 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100424g1gene9042Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna9326rna9326-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM21380.1cds9296Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna9326 ID=rna9326|Name=rna9326|organism=Nannochloropsis gaditana|type=mRNA|length=1678bp
AGTAGCCCAGGGTTAGGTCTTTTTTGTTTCCCTCCTTTCTCAAAATCTCT
TTCCCATAGCACAGCTAGGACTGACCAGAGCGTGGTATTCATGCTGCGTC
CCGTGACTTTACAAGGCGACACGTCCATCGACGGACAGGTACGTTGCCAG
TGGTGCTAAATACCATCATCCCGACCTCCTCCCTCCCCTCTCTTCGTAGC
TACAGAATAAATTGTGTTTTTTGGATGCGGTGCTGACTCGACACTGTTAC
GCGCATGCAAACGGTACAGATTTGTGATCTGTGCGTCCATGACGATCTTG
TTGCCGTAGCTTCGTCCCGTTTAGAGGGCAAGACGTGGAACGGTGCTCTT
ACCCTCTACCTCGCCACGCCGTCCTCCACAACCACCGCCGACACTCCCCC
TTCTCCCCCCCCCCTGACTCTCACTCGCATGCACGTACAAAGCACGACGT
ACGGTATTCCAGCTCTGGCCTGGTGCGGTGCTACTCAGGCGGCATGCAAC
GGGTCGAGTCCTCATGAACCTCATCTCTTAGCGGCTGGCCAGGACAATGG
GGACGTCGTGGTGTACAAGGTGGGACGCAAAGGGGGGGAAAACCTTCACA
GTTCAGACATAGAGGTGGAGGAAACAGTCACGCTCGTTCCCCTCACCACC
TTGACTGACCATGACGACATCGTCTCCGCGGTGGCGGCCGGGCGCGAGGA
GGGAGGGGATGGAAAGCTTGCGACGGGCGGCTGGGACTGCCTCGTCAAGG
TCTGGAGGGTCGGAATGGACATCGTGCAGCCCATGTCGAGCTGGCAGGCG
CACCGTGACCACGTCACGGACTTGGCCTGGCGAGGGCGGGAGGGAGGGCG
GGAGGGAGGGGGAGGTGGAAGGGAATTGGCCTCGGCGGGAAGGGACCGAA
GCGTGAAGTTGTGGGATACCCGCATGGAGGGAGAATCCTTGCGTTTGGTC
GATGCCCACCCTCAAATTCCCCTGGCTTTGGCGTGGGGGGGTAATGCGTC
CTCCCTCCCTTCCTCTTCCTCCCCCCCGACCACCCTACCCCCGGGACCCT
CCCCGCCACCGGGTCTGGAGGGGGTGGCCGAGGGCCCGTTGGAGAAGTTG
ACTTTGATTTCGAATTTGAATTTGAAATGGGGAGCAGGGGAAGGGGAGTG
GGCGCTCTGCGTCGGGTTCGACGACGGGTCTGTGGAGGTTTTGGATCTAC
GGCTGCTACCCCGGGAAGCGAAGTGCAGAGGCCGGGGAGGAAGAAGACGA
GGCGTGGAAAGAAGCAACGAGGCTTCGATCCTACCGTCGCAGAGGTATAG
AATGCATCAGACTAGGACGAACGCCTTGGCACCGGCATCGTGTGGACCGG
GAGCGAGCTCTGAGTTCCTGTTGGCCTCGGGGGGGGACGACGGGGTGGTG
ACGGGGATGCGCGTAAAAGCTGGACAGGAAGGAGAGAATCAGAAATTAGC
AAGTCCACCGTCATGTGGAAGGCATGCGGACTATGTGCGTGCCTTGAGCT
GGCTTGATCTGAGTGGAAAGGGGGGTGGACACGAGAAAGTTCATCCACCG
TGCATACCGTCGCAAGTACTTCTGAGTGGCGGTTGGGACGGCCATGTCCG
TGCGTGGACGTGGGTGGATGAATAAAGGAAGAGGAAAAAGGGGAATTTAA
AGCGAAGAACGAAATGTCCTGGCTGGGT
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protein sequence of rna9326

>rna9326-protein ID=rna9326-protein|Name=rna9326|organism=Nannochloropsis gaditana|type=polypeptide|length=158bp
MPSWRLDFNDPSLQHIYATSHSSVLTPRLCSSWPARLILPPSSTRSPSAP
LPNLFTPSQILNFSVPNGFLGRPAVLAALLLITVVLGAFSCPFQEGSTPN
IPCQAASLPVAAAAVTPAVTKAKCHLRLNSSSPCKRATPRTLRTCGRCWR
DKRSNCRR
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mRNA from alignment at KK037252.1:394413..395235+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna9326 ID=rna9326|Name=rna9326|organism=Nannochloropsis gaditana|type=mRNA|length=823bp|location=Sequence derived from alignment at KK037252.1:394413..395235+ (Nannochloropsis gaditana)
ATGGTATTTAGCACCACTGGCAACGTACCTGTCCGTCGATGGACGTGTCG
CCTTGTAAAGTCACGGGACGCAGCATGAATACCACGCTCTGGTCAGTCCT
AGCTGTGCTATGGGAAAGAGATtttgagaaaggagggaaacaaAAAAGAC
CTAACCCTGGGCTACTGTGAGAGCCGGCTGCTGAgatctccccctttctt
gcAACTCACGATCTCCCCAACACACAAACTTAGTACAGCCATCCTGGCGC
CTGGATTTCAACGACCCCTCCTTGCAGCACATTTACGCCACTTCGCATTC
CTCCGTCCTAACACCACGTCTTTGTTCCTCCTGGCCTGCCcgtctcatcc
tccctccctcctccactcgctCGCCTTCCGCCCCACTGCCAAACCTCTTC
ACCCCTTCACAAATCCTCAACTTTTCTGTTCCCAACGGTTTCTTGGGACG
TCCAGCAGTCTTAGCAGCACTCTTGCTAATTACAGTGGTCCTTGGCGCCT
TCTCCTGTCCATTTCAGGAGGGCTCAACCCCAAACATACCTTGTCAAGCC
GCCTCTTTGCCAgtagcagcggcagcagtgACACCAGCTGTAACAAAAGC
GAAATGCCATTTACGTCTGAACTCGTCCAGTCCATGCAAACGGGCAACGC
CGCGGACTTTGCGGACATGCGGGAGGTGTTGGAGGGACAAGAGATCAAAT
TGCAGGCGTTGAACCCTCTCATTCGGAAGCTGCGGACCGAATTGGCCTAT
GCCATCCACGAGCTTCACGAAGGGGCTACAGAGGTCTCGGCGTCCCTGGT
AGACGAGGCTCTTGTCAAGGTgc
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Coding sequence (CDS) from alignment at KK037252.1:394413..395235+

>rna9326 ID=rna9326|Name=rna9326|organism=Nannochloropsis gaditana|type=CDS|length=954bp|location=Sequence derived from alignment at KK037252.1:394413..395235+ (Nannochloropsis gaditana)
ATGCCATCCTGGCGCCTGGATTTCAACGACCCCTCCTTGCAGCACATTTA
CGCCACTTCGCATTCCTCCGTCCTAACACCACGTCTTTGTTCCTCCTGGC
CTGCCcgtctcatcctccctccctcctccactcgctCGCCTTCCGCCCCA
CTGCCAAACCTCTTCACCCCTTCACAAATCCTCAACTTTTCTGTTCCCAA
CGGTTTCTTGGGACGTCCAGCAGTCTTAGCAGCACTCTTGCTAATTACAG
TGGTCCTTGGCGCCTTCTCCTGTCCATTTCAGGAGGGCTCAACCCCAAAC
ATACCTTGTCAAGCCGCCTCTTTGCCAgtagcagcggcagcagtgACACC
AGCTGTAACAAAAGCGAAATGCCATTTACGTCTGAACTCGTCCAGTCCAT
GCAAACGGGCAACGCCGCGGACTTTGCGGACATGCGGGAGGTGTTGGAGG
GACAAGAGATCAAATTGCAGGCGTTGAATGCCATCCTGGCGCCTGGATTT
CAACGACCCCTCCTTGCAGCACATTTACGCCACTTCGCATTCCTCCGTCC
TAACACCACGTCTTTGTTCCTCCTGGCCTGCCcgtctcatcctccctccc
tcctccactcgctCGCCTTCCGCCCCACTGCCAAACCTCTTCACCCCTTC
ACAAATCCTCAACTTTTCTGTTCCCAACGGTTTCTTGGGACGTCCAGCAG
TCTTAGCAGCACTCTTGCTAATTACAGTGGTCCTTGGCGCCTTCTCCTGT
CCATTTCAGGAGGGCTCAACCCCAAACATACCTTGTCAAGCCGCCTCTTT
GCCAgtagcagcggcagcagtgACACCAGCTGTAACAAAAGCGAAATGCC
ATTTACGTCTGAACTCGTCCAGTCCATGCAAACGGGCAACGCCGCGGACT
TTGCGGACATGCGGGAGGTGTTGGAGGGACAAGAGATCAAATTGCAGGCG
TTGA
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Synonyms
Publications