EWM21380.1, cds9296 (CDS) Nannochloropsis gaditana

Overview
NameEWM21380.1
Unique Namecds9296
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037252.1:394413..394415 +
Alignment locationKK037252.1:394651..395124 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM21380.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100424g1.4522.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037252.1supercontigKK037252.1:394413..394415 +
KK037252.1supercontigKK037252.1:394651..395124 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
[Close]
BLAST of EWM21380.1 vs. NCBI_GenBank
Match: gi|585101594|gb|EWM21380.1| (hypothetical protein Naga_100424g1 [Nannochloropsis gaditana])

HSP 1 Score: 313.538 bits (802), Expect = 4.491e-108
Identity = 158/158 (100.00%), Postives = 158/158 (100.00%), Query Frame = 0 
Query:    1 MPSWRLDFNDPSLQHIYATSHSSVLTPRLCSSWPARLILPPSSTRSPSAPLPNLFTPSQILNFSVPNGFLGRPAVLAALLLITVVLGAFSCPFQEGSTPNIPCQAASLPVAAAAVTPAVTKAKCHLRLNSSSPCKRATPRTLRTCGRCWRDKRSNCRR 158
            MPSWRLDFNDPSLQHIYATSHSSVLTPRLCSSWPARLILPPSSTRSPSAPLPNLFTPSQILNFSVPNGFLGRPAVLAALLLITVVLGAFSCPFQEGSTPNIPCQAASLPVAAAAVTPAVTKAKCHLRLNSSSPCKRATPRTLRTCGRCWRDKRSNCRR
Sbjct:    1 MPSWRLDFNDPSLQHIYATSHSSVLTPRLCSSWPARLILPPSSTRSPSAPLPNLFTPSQILNFSVPNGFLGRPAVLAALLLITVVLGAFSCPFQEGSTPNIPCQAASLPVAAAAVTPAVTKAKCHLRLNSSSPCKRATPRTLRTCGRCWRDKRSNCRR 158
The following BLAST results are available for this feature:
BLAST of EWM21380.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585101594|gb|EWM21380.1|4.491e-108100.00hypothetical protein Naga_100424g1 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9326rna9326Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications