rna9325, rna9325 (mRNA) Nannochloropsis gaditana

Overview
Namerna9325
Unique Namerna9325
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1611
Alignment locationKK037252.1:392901..394578 -

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Properties
Property NameValue
Productmethylosome protein
Orig transcript idgnl|cribi|Naga_100424g2.4521.mrna
Orig protein idgnl|cribi|Naga_100424g2.4521
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037252.1supercontigKK037252.1:392901..394578 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100424g2gene9041Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM21379.1cds9295Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna9325rna9325-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna9325 ID=rna9325|Name=rna9325|organism=Nannochloropsis gaditana|type=mRNA|length=1611bp
TCCGACGTAGACTTTCCAAACGAATACATTCACGTTGTCATCCTTCATTG
CGTACATATTTCTCCATTGCATGGCACAGGAGATCCCACGCTGACGCGTC
GGTGGCGGTACGGATGCCTCCTCTCCTCCGCCTCCTCCTCTTCACCTCCC
TCAGTGCCTCATGTCAACCTTTCCTCCTCCCTTCAAGAACATTCCTTACG
TGCTCGCCACCGACCCACGCCTTCTCCCGAGGCCAAGTTATCACGATGGC
AAGCTCTACGAGTACATCGGCCGTGTCGACGATGGAAACGGTGCACGTCA
GCCTGGGTGATAGGTCTTACCCAATTTACATCGGACCTGGCTTGCTAAAA
CAACCCAATCTACTCACGCAGCACGTGACCGGCAAACGCTGCATGGTGGT
GACCAATGACCGCGTAGGTCCCCTCTACCTGAGCACGGCCGAATATATCC
TCGCCCAGTCCCCTTCCATCCAACCAGGGGACTCCCTTGTCCTGCCCGAC
GGGGAAGCTTACAAAGACATGCCCACGCTAAATTTGATCATGGACGCCGC
CCTCTCTACCAAATTGGACCGGAAAAGCACCCTCGTAGCTCTTGGGGGGG
GCGTAATTGGGGATATGGTTGGATTTGCCGCAGCGATTTACCAGCGGGGG
ATTAATTTTATCCAAGTCCCCACGACCTTGATGGCCATGGTGGACTCCGC
GGTGGGGGGCAAGACTGCCGTGAACCACAAGCTAGGTAAGAACATGATCG
GAGCCTTCTATCAGCCTCAGTGCGTCATCATCGACACCGATACCCTCAGC
ACCCTACCTGACCGGGAACTAGCCTCGGGCATCGCCGAAATCGTCAAATA
CGGGCTGATTCGCGATCCCGAGCTCTTCTGCTGGCTGGAAGACAACATGG
AGAAACTCCTGGCCCGCGAACCGGCTGCCCTCGGCCACGCGATCAAGCGT
TCCTGTGAAAATAAGGCGGAGATCGTGGCCTTGGACGAGCGGGAAGGCGA
GGCCGGCATTCGTGCCACGTTGAATCTGGGGCATACATTTGGGCACGCGG
TGGAAACCGGCTTGGGCTACGGCAAGTGGTTGCACGGGGAAGCGGTCAGT
CTGGGGATGGTGATGGCGGTCGACATGTCCGTGCGGCTCGGGTGGGTGGA
CCGGGAGGTGTATAGCCGTACGGTCGGCCTTTTACAACGGGCGGGGTTGC
CGGTGGCCTTGCCGGAAGAAAGTGGGATGGATTTGGAAAAATTCGAGGCG
ACGATGAGTTTGGACAAGAAAGTGAGCGACGGGGTGTTACGCTTGATATT
GTTGAAAGGCGCGTTGGGTCATTGTGTTTTTACGAGCGCGTATGATGTGG
AAGTGTTGCGGGAGACGATACGTGCGTATTGTTGAAGAAGGAAGGGAGGG
AGGGAGGGAATAAAAAAGGAACAAATCAGCGGATGTGAAGAAAAAATAGC
CCCAAGTGGCGCATATACATGAGACGTTCACCACGACACGTTGTCTCTCG
TAATGCTCGTGGACAAGCATCAAGCCTTTGCTGCAGATCTTCATGACCAA
AGCCAATCCCCTTGGTTAGCGTTTCCTTCCTTCGACGTGGTGCCTCCCTT
CCCTCCTCTCC
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protein sequence of rna9325

>rna9325-protein ID=rna9325-protein|Name=rna9325|organism=Nannochloropsis gaditana|type=polypeptide|length=456bp
MQTVQICDLCVHDDLVAVASSRLEGKTWNGALTLYLATPSSTTTADTPPS
PPPLTLTRMHVQSTTYGIPALAWCGATQAACNGSSPHEPHLLAAGQDNGD
VVVYKVGRKGGENLHSSDIEVEETVTLVPLTTLTDHDDIVSAVAAGREEG
GDGKLATGGWDCLVKVWRVGMDIVQPMSSWQAHRDHVTDLAWRGREGGRE
GGGGGRELASAGRDRSVKLWDTRMEGESLRLVDAHPQIPLALAWGGNASS
LPSSSSPPTTLPPGPSPPPGLEGVAEGPLEKLTLISNLNLKWGAGEGEWA
LCVGFDDGSVEVLDLRLLPREAKCRGRGGRRRGVERSNEASILPSQRYRM
HQTRTNALAPASCGPGASSEFLLASGGDDGVVTGMRVKAGQEGENQKLAS
PPSCGRHADYVRALSWLDLSGKGGGHEKVHPPCIPSQVLLSGGWDGHVRA
WTWVDE
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mRNA from alignment at KK037252.1:392901..394578-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna9325 ID=rna9325|Name=rna9325|organism=Nannochloropsis gaditana|type=mRNA|length=1678bp|location=Sequence derived from alignment at KK037252.1:392901..394578- (Nannochloropsis gaditana)
AGTAGCCCAGGGTTAGGTCTTTTTTGTTTCCCTCCTTTCTCAAAATCTCT
TTCCCATAGCACAGCTAGGACTGACCAGAGCGTGGTATTCATGCTGCGTC
CCGTGACTTTACAAGGCGACACGTCCATCGACGGACAGGTACGTTGCCAG
TGGTGCTAAATACCATCATCCCGACCTCCTCCCTCCCCTCTCTTCGTAGC
TACAGAATAAATTGTGTTTTTTGGATGCGGTGCTGACTCGACACTGTTAC
GCGCATGCAAACGGTACAGATTTGTGATCTGTGCGTCCATGACGATCTTG
TTGCCGTAGCTTCGTCCCGTTTAGAGGGCAAGACGTGGAACGGTGCTCTT
ACCCTCTACCTCGCCACGCCGTCCTCCACAACCACCGCCGACACTCCCCC
TTCTCCCCCCCCCCTGACTCTCACTCGCATGCACGTACAAAGCACGACGT
ACGGTATTCCAGCTCTGGCCTGGTGCGGTGCTACTCAGGCGGCATGCAAC
GGGTCGAGTCCTCATGAACCTCATCTCTTAGCGGCTGGCCAGGACAATGG
GGACGTCGTGGTGTACAAGGTGGGACGCAAAGGGGGGGAAAACCTTCACA
GTTCAGACATAGAGGTGGAGGAAACAGTCACGCTCGTTCCCCTCACCACC
TTGACTGACCATGACGACATCGTCTCCGCGGTGGCGGCCGGGCGCGAGGA
GGGAGGGGATGGAAAGCTTGCGACGGGCGGCTGGGACTGCCTCGTCAAGG
TCTGGAGGGTCGGAATGGACATCGTGCAGCCCATGTCGAGCTGGCAGGCG
CACCGTGACCACGTCACGGACTTGGCCTGGCGAGGGCGGGAGGGAGGGCG
GGAGGGAGGGGGAGGTGGAAGGGAATTGGCCTCGGCGGGAAGGGACCGAA
GCGTGAAGTTGTGGGATACCCGCATGGAGGGAGAATCCTTGCGTTTGGTC
GATGCCCACCCTCAAATTCCCCTGGCTTTGGCGTGGGGGGGTAATGCGTC
CTCCCTCCCTTCCTCTTCCTCCCCCCCGACCACCCTACCCCCGGGACCCT
CCCCGCCACCGGGTCTGGAGGGGGTGGCCGAGGGCCCGTTGGAGAAGTTG
ACTTTGATTTCGAATTTGAATTTGAAATGGGGAGCAGGGGAAGGGGAGTG
GGCGCTCTGCGTCGGGTTCGACGACGGGTCTGTGGAGGTTTTGGATCTAC
GGCTGCTACCCCGGGAAGCGAAGTGCAGAGGCCGGGGAGGAAGAAGACGA
GGCGTGGAAAGAAGCAACGAGGCTTCGATCCTACCGTCGCAGAGGTATAG
AATGCATCAGACTAGGACGAACGCCTTGGCACCGGCATCGTGTGGACCGG
GAGCGAGCTCTGAGTTCCTGTTGGCCTCGGGGGGGGACGACGGGGTGGTG
ACGGGGATGCGCGTAAAAGCTGGACAGGAAGGAGAGAATCAGAAATTAGC
AAGTCCACCGTCATGTGGAAGGCATGCGGACTATGTGCGTGCCTTGAGCT
GGCTTGATCTGAGTGGAAAGGGGGGTGGACACGAGAAAGTTCATCCACCG
TGCATACCGTCGCAAGTACTTCTGAGTGGCGGTTGGGACGGCCATGTCCG
TGCGTGGACGTGGGTGGATGAATAAAGGAAGAGGAAAAAGGGGAATTTAA
AGCGAAGAACGAAATGTCCTGGCTGGGT
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Coding sequence (CDS) from alignment at KK037252.1:392901..394578-

>rna9325 ID=rna9325|Name=rna9325|organism=Nannochloropsis gaditana|type=CDS|length=1371bp|location=Sequence derived from alignment at KK037252.1:392901..394578- (Nannochloropsis gaditana)
ATGCAAACGGTACAGATTTGTGATCTGTGCGTCCATGACGATCTTGTTGC
CGTAGCTTCGTCCCGTTTAGAGGGCAAGACGTGGAACGGTGCTCTTACCC
TCTACCTCGCCACGCCGTCCTCCACAACCACCGCCGACACTCCCCCTTCT
CCCCCCCCCCTGACTCTCACTCGCATGCACGTACAAAGCACGACGTACGG
TATTCCAGCTCTGGCCTGGTGCGGTGCTACTCAGGCGGCATGCAACGGGT
CGAGTCCTCATGAACCTCATCTCTTAGCGGCTGGCCAGGACAATGGGGAC
GTCGTGGTGTACAAGGTGGGACGCAAAGGGGGGGAAAACCTTCACAGTTC
AGACATAGAGGTGGAGGAAACAGTCACGCTCGTTCCCCTCACCACCTTGA
CTGACCATGACGACATCGTCTCCGCGGTGGCGGCCGGGCGCGAGGAGGGA
GGGGATGGAAAGCTTGCGACGGGCGGCTGGGACTGCCTCGTCAAGGTCTG
GAGGGTCGGAATGGACATCGTGCAGCCCATGTCGAGCTGGCAGGCGCACC
GTGACCACGTCACGGACTTGGCCTGGCGAGGGCGGGAGGGAGGGCGGGAG
GGAGGGGGAGGTGGAAGGGAATTGGCCTCGGCGGGAAGGGACCGAAGCGT
GAAGTTGTGGGATACCCGCATGGAGGGAGAATCCTTGCGTTTGGTCGATG
CCCACCCTCAAATTCCCCTGGCTTTGGCGTGGGGGGGTAATGCGTCCTCC
CTCCCTTCCTCTTCCTCCCCCCCGACCACCCTACCCCCGGGACCCTCCCC
GCCACCGGGTCTGGAGGGGGTGGCCGAGGGCCCGTTGGAGAAGTTGACTT
TGATTTCGAATTTGAATTTGAAATGGGGAGCAGGGGAAGGGGAGTGGGCG
CTCTGCGTCGGGTTCGACGACGGGTCTGTGGAGGTTTTGGATCTACGGCT
GCTACCCCGGGAAGCGAAGTGCAGAGGCCGGGGAGGAAGAAGACGAGGCG
TGGAAAGAAGCAACGAGGCTTCGATCCTACCGTCGCAGAGGTATAGAATG
CATCAGACTAGGACGAACGCCTTGGCACCGGCATCGTGTGGACCGGGAGC
GAGCTCTGAGTTCCTGTTGGCCTCGGGGGGGGACGACGGGGTGGTGACGG
GGATGCGCGTAAAAGCTGGACAGGAAGGAGAGAATCAGAAATTAGCAAGT
CCACCGTCATGTGGAAGGCATGCGGACTATGTGCGTGCCTTGAGCTGGCT
TGATCTGAGTGGAAAGGGGGGTGGACACGAGAAAGTTCATCCACCGTGCA
TACCGTCGCAAGTACTTCTGAGTGGCGGTTGGGACGGCCATGTCCGTGCG
TGGACGTGGGTGGATGAATAA
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Synonyms
Publications