EWM21379.1, cds9295 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM21379.1 vs. NCBI_GenBank
Match: gi|585101593|gb|EWM21379.1| (methylosome protein [Nannochloropsis gaditana]) HSP 1 Score: 914.835 bits (2363), Expect = 0.000e+0 Identity = 456/456 (100.00%), Postives = 456/456 (100.00%), Query Frame = 0
Query: 1 MQTVQICDLCVHDDLVAVASSRLEGKTWNGALTLYLATPSSTTTADTPPSPPPLTLTRMHVQSTTYGIPALAWCGATQAACNGSSPHEPHLLAAGQDNGDVVVYKVGRKGGENLHSSDIEVEETVTLVPLTTLTDHDDIVSAVAAGREEGGDGKLATGGWDCLVKVWRVGMDIVQPMSSWQAHRDHVTDLAWRGREGGREGGGGGRELASAGRDRSVKLWDTRMEGESLRLVDAHPQIPLALAWGGNASSLPSSSSPPTTLPPGPSPPPGLEGVAEGPLEKLTLISNLNLKWGAGEGEWALCVGFDDGSVEVLDLRLLPREAKCRGRGGRRRGVERSNEASILPSQRYRMHQTRTNALAPASCGPGASSEFLLASGGDDGVVTGMRVKAGQEGENQKLASPPSCGRHADYVRALSWLDLSGKGGGHEKVHPPCIPSQVLLSGGWDGHVRAWTWVDE 456
MQTVQICDLCVHDDLVAVASSRLEGKTWNGALTLYLATPSSTTTADTPPSPPPLTLTRMHVQSTTYGIPALAWCGATQAACNGSSPHEPHLLAAGQDNGDVVVYKVGRKGGENLHSSDIEVEETVTLVPLTTLTDHDDIVSAVAAGREEGGDGKLATGGWDCLVKVWRVGMDIVQPMSSWQAHRDHVTDLAWRGREGGREGGGGGRELASAGRDRSVKLWDTRMEGESLRLVDAHPQIPLALAWGGNASSLPSSSSPPTTLPPGPSPPPGLEGVAEGPLEKLTLISNLNLKWGAGEGEWALCVGFDDGSVEVLDLRLLPREAKCRGRGGRRRGVERSNEASILPSQRYRMHQTRTNALAPASCGPGASSEFLLASGGDDGVVTGMRVKAGQEGENQKLASPPSCGRHADYVRALSWLDLSGKGGGHEKVHPPCIPSQVLLSGGWDGHVRAWTWVDE
Sbjct: 1 MQTVQICDLCVHDDLVAVASSRLEGKTWNGALTLYLATPSSTTTADTPPSPPPLTLTRMHVQSTTYGIPALAWCGATQAACNGSSPHEPHLLAAGQDNGDVVVYKVGRKGGENLHSSDIEVEETVTLVPLTTLTDHDDIVSAVAAGREEGGDGKLATGGWDCLVKVWRVGMDIVQPMSSWQAHRDHVTDLAWRGREGGREGGGGGRELASAGRDRSVKLWDTRMEGESLRLVDAHPQIPLALAWGGNASSLPSSSSPPTTLPPGPSPPPGLEGVAEGPLEKLTLISNLNLKWGAGEGEWALCVGFDDGSVEVLDLRLLPREAKCRGRGGRRRGVERSNEASILPSQRYRMHQTRTNALAPASCGPGASSEFLLASGGDDGVVTGMRVKAGQEGENQKLASPPSCGRHADYVRALSWLDLSGKGGGHEKVHPPCIPSQVLLSGGWDGHVRAWTWVDE 456
BLAST of EWM21379.1 vs. NCBI_GenBank
Match: gi|299469814|emb|CBN76668.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 92.8189 bits (229), Expect = 2.950e-17 Identity = 114/437 (26.09%), Postives = 166/437 (37.99%), Query Frame = 0
Query: 11 VHDDLVAVASSRLEGKTWNGALTLYLATPSSTTTADTPPSPPPLTLTRMHVQSTTYGIPALAWCGATQAACNGSSPHEP--HLLAAGQDNGDVVVYKVGRKGGENLHSSDIEVEETVTLVPLTTLTDHDDIVSAVAAGREEGGDGKLATGGWDCLVKVWRVGMDIVQPMSSWQAHRDHVTDLAWRGREGGREGGGGGRELASAGRDRSVKLWDTRMEGESLRLVDAHPQIPLALAWGGNASSLPSSSSPPTTLPPGPSPPPGLEGVAEGPLEKLTLISNLNLKWGAGEGEWALCVGFDDGSVEVLDLRLLPREAKCRGRGGRRRGVERSNEASILPSQRYRMHQTRTNALAPASCGPGASSEFLLASGGDDGVVTGMRVKAGQEGENQKLASPPSCGRHADYVRALSWLDLSGKGGGHEKVHPPCIPSQVLLSGGWD 445
+ DD++ VA+S L G TW+ +L + L + V ++ Q+ C +P +++AG DNGDV VYK ++ E LV + L +HDDIVS+VAA R DG + +GG+D V VW + D + ++ H +VT + W G + AS+ D SV++WD R PQ LA W G + L++ W GE L VG +DG+V VLD R L +S L +++ + A PA G + LLAS GDDGV+ R+ G+N ++ H DY +ALSW D + L+SGGWD
Sbjct: 19 ISDDMILVATSNLGGNTWDSSLQV-------------------LDFSTKEVVASV----------KQQSGCADVCWVKPGRRVVSAG-DNGDVKVYK-------------MDEEAPARLVEVANLEEHDDIVSSVAASRSR--DGLVLSGGYDRSVNVWDIDSDRDTSLDTFTGHSGYVTGVEWSA------GQDDSQVFASSSTDCSVRVWDRR-----------QPQGCLACHWFG--------------------------------------VPALSISWDHCSGE-LLAVGCEDGTVAVLDRRTL---------------------SSPLFTEQSHTGRVNQTAFGPAPSGGDSEVSGLLASVGDDGVLAVQRL-----GDN---SNHSRSALHTDYAQALSWRDENN-----------------LVSGGWD 308
BLAST of EWM21379.1 vs. NCBI_GenBank
Match: gi|953498582|emb|CEG40220.1| (Polyadenylation factor I complex, subunit PFS2 [Plasmopara halstedii]) HSP 1 Score: 67.3958 bits (163), Expect = 1.166e-8 Identity = 70/253 (27.67%), Postives = 113/253 (44.66%), Query Frame = 0
Query: 11 VHDDLVAVASSRLEGKTWNGALTLYLATPSSTTTADTPPSPPPLTLTRMHVQSTTYGIPALAWCGATQAACNGSSPHEPHLLAAGQDNGDVVVYKVGRKGGENLHSSDIEVEETVTLVPLT-------TLTD--HDDIVSAVAAGREEGGDGKLATGGWDCLVKVWRVGMDIVQPMSSWQAHRDHVTDLAWRGREGGREGGGGGRELASAGRDRSVKLWDTRM-EGESLRL--------VDAHPQIPLALAWG 245
VH ++ S+LEG W+G +TL A S L + +++ G+ ALAWC + + ++LA G D+GDV + K + +E + PL+ T+TD HDD+++ V++ E LAT WD VK+W V + + Q ++++ H TDL W G L SA +D +V++WD R +G +L + VD HP+ P+ + G
Sbjct: 12 VHFNMRRRRCSQLEGNVWSGGVTLLDAQTSE-------------QLCELQLET---GVAALAWCSS-----------DGNVLALGCDDGDVRLAK-------------LSADEALIFKPLSGSNDDKDTVTDWGHDDVITDVSSSITEK--THLATCSWDLTVKLWDVTV-MDQTIATFHGH----TDLIW----GVAMNPTHKHVLCSASQDSTVQVWDARQSQGAALSILTLSPALSVDWHPRQPVIFSVG 213
BLAST of EWM21379.1 vs. NCBI_GenBank
Match: gi|570979530|gb|ETP40454.1| (hypothetical protein F442_12215 [Phytophthora parasitica P10297]) HSP 1 Score: 66.2402 bits (160), Expect = 3.535e-8 Identity = 73/251 (29.08%), Postives = 112/251 (44.62%), Query Frame = 0
Query: 15 LVAVASSRLEGKTWNGALTLYLATPSSTTTADTPPSPPPLTLTRMHVQSTTYGIPALAWCGATQAACNGSSPHEPHLLAAGQDNGDVVVYKVGRKGGENLHSSDIEVEETVTLVPLTTLTD----------HDDIVSAVAAGREEGGDGKLATGGWDCLVKVWRVG-MDIVQPMSSWQAHRDHVTDLAWRGREGGREGGGGGRELASAGRDRSVKLWDTRM-EGESLRL--------VDAHPQIPLALAWG 245
L+AVA S+LEG W+G + L A + L + +++ G+ +LAWC E +LA G D+GDV + K+ S+D+ T VPLTT + HDD+V+ V+A + +LAT WD VK+W VG MD + ++++ H +DL W G L SA +D +V++WD R + +L + VD HP+ P + G
Sbjct: 41 LLAVAQSQLEGNVWSGGVALLDAVSNE-------------RLCELQLET---GVSSLAWCST-----------EGDVLALGCDDGDVRLAKL---------STDV----TFAFVPLTTGSSDDEDAVSGWGHDDVVTGVSASPVDK--TQLATCSWDLTVKLWDVGAMD--KTVATFDGH----SDLIW----GVAMNPTHAHILCSASQDSTVQVWDARRPQSAALSVSTLLPALSVDWHPKQPTVFSVG 239
BLAST of EWM21379.1 vs. NCBI_GenBank
Match: gi|568015079|gb|ETL89256.1| (hypothetical protein L917_11790 [Phytophthora parasitica]) HSP 1 Score: 65.855 bits (159), Expect = 4.838e-8 Identity = 73/251 (29.08%), Postives = 111/251 (44.22%), Query Frame = 0
Query: 15 LVAVASSRLEGKTWNGALTLYLATPSSTTTADTPPSPPPLTLTRMHVQSTTYGIPALAWCGATQAACNGSSPHEPHLLAAGQDNGDVVVYKVGRKGGENLHSSDIEVEETVTLVPLTTLTD----------HDDIVSAVAAGREEGGDGKLATGGWDCLVKVWRVG-MDIVQPMSSWQAHRDHVTDLAWRGREGGREGGGGGRELASAGRDRSVKLWDTRM-EGESLRL--------VDAHPQIPLALAWG 245
L+AVA S+LEG W+G + L A + L + +++ G+ +LAWC E +LA G D+GDV + K+ S+D+ T VPLTT + HDD+V+ V+A + +LAT WD VK+W VG MD + ++++ H +DL W G L SA +D +V++WD R + +L + VD HP+ P G
Sbjct: 41 LLAVAQSQLEGNVWSGGVALLDAVSNE-------------RLCELQLET---GVSSLAWCST-----------EGDVLALGCDDGDVRLAKL---------STDV----TFAFVPLTTGSSDDEDAVSGWGHDDVVTGVSASPVDK--TQLATCSWDLTVKLWDVGAMD--KTVATFDGH----SDLIW----GVAMNPTHAHILCSASQDSTVQVWDARRPQSAALSVSTLLPALSVDWHPKQPTVFTVG 239
BLAST of EWM21379.1 vs. NCBI_GenBank
Match: gi|505011805|ref|WP_015198907.1| (WD40 repeat-containing protein [Calothrix parietina] >gi|428236489|gb|AFZ02279.1| WD40 repeat-containing protein [Calothrix sp. PCC 6303]) HSP 1 Score: 66.2402 bits (160), Expect = 7.401e-8 Identity = 48/143 (33.57%), Postives = 70/143 (48.95%), Query Frame = 0
Query: 116 SSD--IEVEETVTLVPLTTLTDHDDIVSAVAAGREEGGDGK-LATGGWDCLVKVWRVGMDIVQPMSSWQAHRDHVTDLAWRGREGGREGGGGGRELASAGRDRSVKLWDTRMEGESLRLVDAHPQIPLALAWGGNASSLPSSS 255
SSD I++ + T PL TLT H D V +VA DGK LA+ D +K+W M +P+ + H D V +AW G+ LASA D ++KLWD G+ L+ ++ H +AW + +L S+S
Sbjct: 1186 SSDTTIKLWDETTGKPLKTLTGHSDGVISVAWS----ADGKTLASASLDNTIKLWDATMG--KPLKTLAGHSDAVYGVAW---------SADGKTLASASWDNTIKLWDA-TTGKPLKTLNGHSDHVYGVAWSADGKTLASAS 1312
BLAST of EWM21379.1 vs. NCBI_GenBank
Match: gi|566019723|gb|ETI42634.1| (hypothetical protein F443_12301 [Phytophthora parasitica P1569]) HSP 1 Score: 65.0846 bits (157), Expect = 9.473e-8 Identity = 72/251 (28.69%), Postives = 112/251 (44.62%), Query Frame = 0
Query: 15 LVAVASSRLEGKTWNGALTLYLATPSSTTTADTPPSPPPLTLTRMHVQSTTYGIPALAWCGATQAACNGSSPHEPHLLAAGQDNGDVVVYKVGRKGGENLHSSDIEVEETVTLVPLTTLTD----------HDDIVSAVAAGREEGGDGKLATGGWDCLVKVWRVG-MDIVQPMSSWQAHRDHVTDLAWRGREGGREGGGGGRELASAGRDRSVKLWDTRM-EGESLRL--------VDAHPQIPLALAWG 245
L+AVA S+LEG W+G + L A + L + +++ G+ +LAWC E +LA G D+GDV + K+ S+D+ T VPL+T + HDD+V+ V+A + +LAT WD VK+W VG MD + ++++ H +DL W G L SA +D +V++WD R + +L + VD HP+ P + G
Sbjct: 41 LLAVAQSQLEGNVWSGGVALLDAVSNE-------------RLCELQLET---GVSSLAWCST-----------EGDVLALGCDDGDVRLAKL---------STDV----TFAFVPLSTGSSDDEDAVSGWGHDDVVTGVSASPVDK--TQLATCSWDLTVKLWDVGAMD--KTVATFDGH----SDLIW----GVAMNPTHAHILCSASQDSTVQVWDARRPQSAALSVSTLLPALSVDWHPKQPTVFSVG 239
BLAST of EWM21379.1 vs. NCBI_GenBank
Match: gi|568045337|gb|ETM42493.1| (hypothetical protein L914_11855 [Phytophthora parasitica]) HSP 1 Score: 64.6994 bits (156), Expect = 1.009e-7 Identity = 72/251 (28.69%), Postives = 112/251 (44.62%), Query Frame = 0
Query: 15 LVAVASSRLEGKTWNGALTLYLATPSSTTTADTPPSPPPLTLTRMHVQSTTYGIPALAWCGATQAACNGSSPHEPHLLAAGQDNGDVVVYKVGRKGGENLHSSDIEVEETVTLVPLTTLTD----------HDDIVSAVAAGREEGGDGKLATGGWDCLVKVWRVG-MDIVQPMSSWQAHRDHVTDLAWRGREGGREGGGGGRELASAGRDRSVKLWDTRM-EGESLRL--------VDAHPQIPLALAWG 245
L+AVA S+LEG W+G + L A + L + +++ G+ +LAWC E +LA G D+GDV + K+ S+D+ T VPL+T + HDD+V+ V+A + +LAT WD VK+W VG MD + ++++ H +DL W G L SA +D +V++WD R + +L + VD HP+ P + G
Sbjct: 41 LLAVAQSQLEGNVWSGGVALLDAVSNE-------------RLCELQLET---GVSSLAWCST-----------EGDVLALGCDDGDVRLAKL---------STDV----TFAFVPLSTGSSDDEDAVSGWGHDDVVTGVSASPVDK--TQLATCSWDLTVKLWDVGAMD--KTVATFDGH----SDLIW----GVAMNPTHAHILCSASQDSTVQVWDARRPQSAALSVSTLLPALSVDWHPKQPTVFSVG 239
BLAST of EWM21379.1 vs. NCBI_GenBank
Match: gi|570323281|gb|ETO71229.1| (hypothetical protein F444_12399 [Phytophthora parasitica P1976]) HSP 1 Score: 64.3142 bits (155), Expect = 1.578e-7 Identity = 72/251 (28.69%), Postives = 111/251 (44.22%), Query Frame = 0
Query: 15 LVAVASSRLEGKTWNGALTLYLATPSSTTTADTPPSPPPLTLTRMHVQSTTYGIPALAWCGATQAACNGSSPHEPHLLAAGQDNGDVVVYKVGRKGGENLHSSDIEVEETVTLVPLTTLTD----------HDDIVSAVAAGREEGGDGKLATGGWDCLVKVWRVG-MDIVQPMSSWQAHRDHVTDLAWRGREGGREGGGGGRELASAGRDRSVKLWDTRM-EGESLRL--------VDAHPQIPLALAWG 245
L+AVA S+LEG W+G + L A + L + +++ G+ +LAWC E +LA G D+GDV + K+ S+D+ T VPL+T + HDD+V+ V+A + +LAT WD VK+W VG MD + ++++ H +DL W G L SA +D +V++WD R + +L + VD HP+ P G
Sbjct: 41 LLAVAQSQLEGNVWSGGVALLDAVSNE-------------RLCELQLET---GVSSLAWCST-----------EGDVLALGCDDGDVRLAKL---------STDV----TFAFVPLSTGSSDDEDAVSGWGHDDVVTGVSASPVDK--TQLATCSWDLTVKLWDVGAMD--KTVATFDGH----SDLIW----GVVMNPTHAHILCSASQDSTVQVWDARRPQSAALSVSTLLPALSVDWHPKQPTVFTVG 239
BLAST of EWM21379.1 vs. NCBI_GenBank
Match: gi|301098870|ref|XP_002898527.1| (methylosome protein 50, putative [Phytophthora infestans T30-4] >gi|262104952|gb|EEY63004.1| methylosome protein 50, putative [Phytophthora infestans T30-4]) HSP 1 Score: 63.5438 bits (153), Expect = 1.962e-7 Identity = 67/220 (30.45%), Postives = 99/220 (45.00%), Query Frame = 0
Query: 15 LVAVASSRLEGKTWNGALTLYLATPSSTTTADTPPSPPPLTLTRMHVQSTTYGIPALAWCGATQAACNGSSPHEPHLLAAGQDNGDVVVYKVGRKGGENLHSSDIEVEETVTLVPLTT--LTD--------HDDIVSAVAAGREEGGDGKLATGGWDCLVKVWRVG-MDIVQPMSSWQAHRDHVTDLAWRGREGGREGGGGGRELASAGRDRSVKLWDTR 223
L+AVA S+LEG W+G + L A + L + +++ G+ +LAWC A E +LA G D+GDV + K+ S+D+ T VPL T D HDD+V+ V+ E +LAT WD VK+W +G MD + ++++ H TDL W G L SA +D +V++WD R
Sbjct: 41 LLAVAQSQLEGNVWSGGVALLDAASNE-------------RLCELQLET---GVASLAWCSA-----------EGDVLALGCDDGDVRLAKL---------STDV----TFAFVPLGTGGSIDEDAVCGWGHDDVVTGVSISSVE--KTQLATCSWDLTVKLWDIGAMD--KTVATFDGH----TDLIW----GVAMNPTHANLLCSASQDSTVQVWDAR 208 The following BLAST results are available for this feature:
BLAST of EWM21379.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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