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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100424g5.4519.mrna |
| Orig protein id | gnl|cribi|Naga_100424g5.4519 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037252.1 | supercontig | KK037252.1:383787..385789 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna9322 ID=rna9322|Name=rna9322|organism=Nannochloropsis gaditana|type=mRNA|length=935bp
CCTTTTTCTCGCCAAGTCCCTCTGTTGGTGTCTCCCCTCCTCCGTCGCCC
TTTGTTCCTGCTCCCCCCACCGCCTCCACGGACACGGAGGGTTCGCTGCC
CGGAGGGGTCACCTTGGGGAAGAGGAAAATGGGCCAAGGCCTGGAAGAAA
AAAGCGTCGCGCCGGTGTCGCCTTCCGAGTCCCACTTCCAAATCTGCTTT
GTTCTTCTTCCCCTCGAGCCCTTCTCGCCCTCCTTGCCTCCCTCCCTGCG
TCTTCCCTTCCTGAACGCCCCCCCCGCAGCTCCTCCCCGCCTGGTGCGAA
CAACCGCCAATGCAACAGTCAGGAGTATCAAGATCTTCGTCGCCGCTCGT
CTCCAGCTGGAGTCAGCAGCTTTTCTCGACCTGTCTGTGTGGGTGCATTG
TTCGTTGCCCTTTCTAAAAGCTTCCCCTTCTCAGTCTTCTTCTTCTTCTT
TCTCTCCCCTTCAAGTGAGGGAGGAGGGCGACGGGGGAAGAGAATCTCAG
AGAAATCTCGGTCAAGGAACTATAAAAAAGGTTGAAGCGGGAGCACCACA
AGTAAAAGAGACGGATGGAGGCAAGACGCGGAATGGATCTGTAAAGGGGA
AGGATAGTGATTTGATGACAGAGGGGAAACGACAGGGCCGACGCGTCATC
CTGGACGACGCCTTGACGCTTGGAGATGTGATAGAGTATTTCTGGAGCTT
GAACGTCAGCGAGGAGTTATGCTTGTACTACACTGTGCGGACACAGGGAA
TGGCGGGACGTTTTTGGTGAGGAGAGGGAGGGTAAGGGAAGGAAAACGGA
GGGTGGAAAGGAGGAACAGTATGTTGTGGAGAGCAGTGTATGGATTAATC
CTGTGTCCATTACATCCCAATAATGTATTTACACATTTCTGTAAGGATGA
TCTGTGTATTAACAAAGAAATATGTAACGAGCTGA back to topprotein sequence of rna9322 >rna9322-protein ID=rna9322-protein|Name=rna9322|organism=Nannochloropsis gaditana|type=polypeptide|length=120bp
MDLPRGCLLGGNTSALHVQGHATRLLQGRSTKVFKRARLGDEALSFKRGV
LKPNTWKPKLRYVKTDDELAWTLPAGGIVLGKSYKIKWRVHLGGGVASGT
ELPLTVSVAEWMEDLVVSVK back to topmRNA from alignment at KK037252.1:383787..385789+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna9322 ID=rna9322|Name=rna9322|organism=Nannochloropsis gaditana|type=mRNA|length=2003bp|location=Sequence derived from alignment at KK037252.1:383787..385789+ (Nannochloropsis gaditana)
ATGGATCTTCCACGGGGAGTAAGCTGagctctctttttccccatGTCTCT
CTCTTGGATTACGCACAGGTGGTGGTAAACGTGGTCCCTGATCCCTCGGA
CCCCCTTTTCGTGCCGCCCAGCAACTTCGTCCTGGGCGACCCTCCTATTT
ACAAGTTCATCGCTACCAATGCCAGCTTCAGCGGAGACATTACCGTCTGT
CTGTCCTatctcccctccgccttcccggCCGGCACGCAGCCTCGTCTCTT
TCATTTTGTCAATGAGGTCTGGATCGACGTGACGACCCGTGTGGACCCCG
AGCTCACGAGCTGCGGCGTCGTCACCTCCCTGagtcccttcgccctcggc
ACCGTCACGTCGCCGACCTTTTTGGCACAAGCCTACTTGAAGTCCTTGGT
ACAGGCCCCGGGTCGCCGGTTCACGCTCTTCCTGGACCTGCTGTTCTTGG
CGCGGCCTCTGGAGGACGTAGTCGTCTCGGTAAGTGTACACAGTatcaag
gggagggagggggagggtggggatgCATGAAGGCAGCAGGGGAAGAGATC
GCTTGTGCAGGGGGGGAtgaagaggcaggaagggtGCCTTGCTCTGTGGA
CGACTCCCTCACAACCATCCCCACGCTTGCTCCCCCACAGTGCCTGCTGG
GAGGGAATacctccgccctccacgTTCAAGGACACGCGACACGGCTTCTC
CAGGGTCGCAGTACCAAGGTATTCAAGCGTGCTCGACTCGGTGACGAGGC
TCTGAGTTTCAAGCGCGGCGTCTTAAAGCCCAACACGTGGAAGCCCAAGT
ACGTGCTTCTCGCTCCGTCTCTGAGCCTGTCCCTTGGTCATTATACGTCG
TCTCTCTCGGGTATTGTCTCGGGGTTTGACTGGTTCTCTCTGAGCACCTG
GCAGGCTCGTGTCGTCGTCTATCGCCGTCCTCTTGCACGCCATCCCCCTG
GCACGCTGAGTCATTGATCTCACTCCCTCATCTACGTTGATACTTCATGT
ATCCCCCTGCCGCAAGTTTTTCTGTGCTTGCCATTGCGTTGCTGTTTCTC
GTACCCTCACCGTTGCTCTCCTGCCCTCTGTCCAGGCTTCGCTACGTCAA
GACGGACGACGAGCTCGCGTGGACCCTCCCTGCGGGAGGTATCGTCCTCG
GCAAGTCCTACAAGATCAAGTGGAGGGTTCAcctgggcgggggcgtggcC
AGCGGCACCGAGCTGCCCCTGACTGTGAGTGTGGCGGAGTGGATGGAGGA
CTTGGTCGTCTCTGTCAAATAGAGGCaccgaggaagggatcagAGCTGCG
GGCGGTAAAGGAGAGCCAGCTCTTATTCTGTGTGTTTTTTCCTGCGGAGT
GGATGGAGGACTTGGTCGTCTCTGTCAAATAGAGGCaccgaggaagggat
cagAGCTGCGGGCGGTAAAGGAGAGCCAGCTCTTATTctgtgtttttttt
tcctgaatGAAGGTGTTTGTTTTGCGTCTTCTTTCTGCGTGAGAGAAGCG
ATATGTTGTtgttattattattattgaATGGGATATCTGTCTTGTTCGTT
GAATGGAGGCGTTTGCGTTGGATGCAGGGGAATGGGACAGGATGTATGCC
GCAAGCCTCGAGCTGCGACAAGTTGATGTGTGCGTGTGTGAGATGTCATC
TCATGACTCGACTTGAGATGATTGTCCACGGAATGGAAGAAATGGCAGTA
GGTGAGATCAATCGACTGAAGGGCGAGTATGTCCAAAAAAAGGGATTTGG
TGCATGGACTGAATGATGGGCGAGTGAATGAGGACCTGCGTGTttgtgga
aggagaatgTTGCAGTAGACAAAAAATTGCTCGGTCGTTAAAAAGATATA
TTCGGCGCACATGTCAAAAAAAGAGAGTGAAGCAAACGACTTGGATTCGC
AGTCTGTGACCAATGTTGTAGCATCAGAGAGAGAGTCACTGTTATTTATT
AGTTTATTTACGATTGGCTTGTCGTCCTGATGGAATtcaaaagaggaaga
aga back to topCoding sequence (CDS) from alignment at KK037252.1:383787..385789+ >rna9322 ID=rna9322|Name=rna9322|organism=Nannochloropsis gaditana|type=CDS|length=1089bp|location=Sequence derived from alignment at KK037252.1:383787..385789+ (Nannochloropsis gaditana)
ATGGATCTTCCACGGGGATGCCTGCTGGGAGGGAATacctccgccctcca
cgTTCAAGGACACGCGACACGGCTTCTCCAGGGTCGCAGTACCAAGGTAT
TCAAGCGTGCTCGACTCGGTGACGAGGCTCTGAGTTTCAAGCGCGGCGTC
TTAAAGCCCAACACGTGGAAGCCCAAGCTTCGCTACGTCAAGACGGACGA
CGAGCTCGCGTGGACCCTCCCTGCGGGAGGTATCGTCCTCGGCAAGTCCT
ACAAGATCAAGTGGAGGGTTCAcctgggcgggggcgtggcCAGCGGCACC
GAGCTGCCCCTGACTGTGAGTGTGGCGGAGTGGATGGAGGACTTGGTCGT
CTCTGTCAAATAGATGGATCTTCCACGGGGATGCCTGCTGGGAGGGAATa
cctccgccctccacgTTCAAGGACACGCGACACGGCTTCTCCAGGGTCGC
AGTACCAAGGTATTCAAGCGTGCTCGACTCGGTGACGAGGCTCTGAGTTT
CAAGCGCGGCGTCTTAAAGCCCAACACGTGGAAGCCCAAGCTTCGCTACG
TCAAGACGGACGACGAGCTCGCGTGGACCCTCCCTGCGGGAGGTATCGTC
CTCGGCAAGTCCTACAAGATCAAGTGGAGGGTTCAcctgggcgggggcgt
ggcCAGCGGCACCGAGCTGCCCCTGACTGTGAGTGTGGCGGAGTGGATGG
AGGACTTGGTCGTCTCTGTCAAATAGATGGATCTTCCACGGGGATGCCTG
CTGGGAGGGAATacctccgccctccacgTTCAAGGACACGCGACACGGCT
TCTCCAGGGTCGCAGTACCAAGGTATTCAAGCGTGCTCGACTCGGTGACG
AGGCTCTGAGTTTCAAGCGCGGCGTCTTAAAGCCCAACACGTGGAAGCCC
AAGCTTCGCTACGTCAAGACGGACGACGAGCTCGCGTGGACCCTCCCTGC
GGGAGGTATCGTCCTCGGCAAGTCCTACAAGATCAAGTGGAGGGTTCAcc
tgggcgggggcgtggcCAGCGGCACCGAGCTGCCCCTGACTGTGAGTGTG
GCGGAGTGGATGGAGGACTTGGTCGTCTCTGTCAAATAG back to top
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