EWM21377.1, cds9292 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM21377.1 vs. NCBI_GenBank
Match: gi|585101591|gb|EWM21377.1| (hypothetical protein Naga_100424g5 [Nannochloropsis gaditana]) HSP 1 Score: 242.662 bits (618), Expect = 3.484e-81 Identity = 120/120 (100.00%), Postives = 120/120 (100.00%), Query Frame = 0
Query: 1 MDLPRGCLLGGNTSALHVQGHATRLLQGRSTKVFKRARLGDEALSFKRGVLKPNTWKPKLRYVKTDDELAWTLPAGGIVLGKSYKIKWRVHLGGGVASGTELPLTVSVAEWMEDLVVSVK 120
MDLPRGCLLGGNTSALHVQGHATRLLQGRSTKVFKRARLGDEALSFKRGVLKPNTWKPKLRYVKTDDELAWTLPAGGIVLGKSYKIKWRVHLGGGVASGTELPLTVSVAEWMEDLVVSVK
Sbjct: 1 MDLPRGCLLGGNTSALHVQGHATRLLQGRSTKVFKRARLGDEALSFKRGVLKPNTWKPKLRYVKTDDELAWTLPAGGIVLGKSYKIKWRVHLGGGVASGTELPLTVSVAEWMEDLVVSVK 120
BLAST of EWM21377.1 vs. NCBI_GenBank
Match: gi|553176372|ref|XP_005852373.1| (hypothetical protein NGA_0690000 [Nannochloropsis gaditana CCMP526] >gi|422296155|gb|EKU23454.1| hypothetical protein NGA_0690000 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 196.438 bits (498), Expect = 6.461e-63 Identity = 92/119 (77.31%), Postives = 106/119 (89.08%), Query Frame = 0
Query: 2 DLPRGCLLGGNTSALHVQGHATRLLQGRSTKVFKRARLGDEALSFKRGVLKPNTWKPKLRYVKTDDELAWTLPAGGIVLGKSYKIKWRVHLGGGVASGTELPLTVSVAEWMEDLVVSVK 120
D+ CLLGGNT+ LHVQG+ATRLLQG STKV KRARLGDEALSFKRG L+PNTW+PKLRY+KT++ELAWTLP GGIV GK+YKIKWR+H+G VASGTELPLTV VA+WM+DLVV+ K
Sbjct: 3 DVVVSCLLGGNTTTLHVQGNATRLLQGHSTKVLKRARLGDEALSFKRGKLRPNTWRPKLRYIKTNNELAWTLPVGGIVFGKTYKIKWRIHMGRSVASGTELPLTVRVADWMKDLVVTAK 121
BLAST of EWM21377.1 vs. NCBI_GenBank
Match: gi|553178404|ref|XP_005852549.1| (hypothetical protein NGA_0710700, partial [Nannochloropsis gaditana CCMP526] >gi|422295984|gb|EKU23283.1| hypothetical protein NGA_0710700, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 189.504 bits (480), Expect = 2.177e-59 Identity = 93/119 (78.15%), Postives = 103/119 (86.55%), Query Frame = 0
Query: 2 DLPRGCLLGGNTSALHVQGHATRLLQGRSTKVFKRARLGDEALSFKRGVLKPNTWKPKLRYVKTDDELAWTLPAGGIVLGKSYKIKWRVHLGGGVASGTELPLTVSVAEWMEDLVVSVK 120
D+ CLLGGN + VQGHATRLLQG STKV KRARLGDEALSF+RG L+PNTW+PKLRYVKT+DELAWTLP GGIV GK+YKIKWR+ LG GVASGTELPLTV VA+WMEDLVV+ K
Sbjct: 60 DVIVSCLLGGNAT---VQGHATRLLQGHSTKVLKRARLGDEALSFQRGKLRPNTWRPKLRYVKTNDELAWTLPVGGIVFGKTYKIKWRIRLGRGVASGTELPLTVRVADWMEDLVVTAK 175
BLAST of EWM21377.1 vs. NCBI_GenBank
Match: gi|585102369|gb|EWM21985.1| (hypothetical protein Naga_100745g2 [Nannochloropsis gaditana]) HSP 1 Score: 89.7373 bits (221), Expect = 5.746e-19 Identity = 40/81 (49.38%), Postives = 55/81 (67.90%), Query Frame = 0
Query: 39 LGDEALSFKRGVLKPNTWKPKLRYVKTDDELAWTLPAGGIVLGKSYKIKWRVHLGGGVASGTELPLTVSVAEWMEDLVVSV 119
+G L+FKR L+PNTW+PK RY +E+ W LP G VL K+YKIKW++ + GV SGT+LP + V M+DL+V+V
Sbjct: 258 IGARELTFKRSTLRPNTWRPKPRYSIVGNEVVWQLPFDGFVLKKTYKIKWKLRVDRGVTSGTQLPFILRVGSNMQDLMVTV 338
BLAST of EWM21377.1 vs. NCBI_GenBank
Match: gi|585103321|gb|EWM22729.1| (hypothetical protein Naga_100561g2 [Nannochloropsis gaditana] >gi|585103322|gb|EWM22730.1| hypothetical protein Naga_100561g2 [Nannochloropsis gaditana]) HSP 1 Score: 70.8626 bits (172), Expect = 4.491e-12 Identity = 39/83 (46.99%), Postives = 51/83 (61.45%), Query Frame = 0
Query: 41 DEALSFKRGVLKPNTWKPKLRYVKTD--DELAWTLPAGGIVLGKSYKIKWRVHLGGGVASGTELPLTVSV-AEWMEDLVVSVK 120
D +SF R + PNTW+PK+ Y D D L WTLP+ G L K YKI + +G V SGT +PL +SV +EW ++L V VK
Sbjct: 261 DVGISFSRSKIAPNTWRPKITYEIVDEGDTLVWTLPSDGTRLLKKYKITIIMRIGKNVPSGTMIPLYLSVPSEWEQELGVVVK 343
BLAST of EWM21377.1 vs. NCBI_GenBank
Match: gi|585103332|gb|EWM22739.1| (hypothetical protein Naga_100209g9 [Nannochloropsis gaditana]) HSP 1 Score: 70.0922 bits (170), Expect = 9.396e-12 Identity = 39/83 (46.99%), Postives = 50/83 (60.24%), Query Frame = 0
Query: 41 DEALSFKRGVLKPNTWKPKLRYVKTD--DELAWTLPAGGIVLGKSYKIKWRVHLGGGVASGTELPLTVSVA-EWMEDLVVSVK 120
D +SF R + PNTW+PK+ Y D D L WTLP+ G L K YKI + +G V SGT +PL +SV EW ++L V VK
Sbjct: 261 DVGISFSRSKIAPNTWRPKITYEIVDEGDTLVWTLPSDGTRLLKKYKITIIMRIGKNVPSGTVIPLYLSVPFEWEQELGVVVK 343
BLAST of EWM21377.1 vs. NCBI_GenBank
Match: gi|553177188|ref|XP_005852441.1| (hypothetical protein NGA_0696000, partial [Nannochloropsis gaditana CCMP526] >gi|422296092|gb|EKU23391.1| hypothetical protein NGA_0696000, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 60.077 bits (144), Expect = 4.450e-10 Identity = 28/36 (77.78%), Postives = 30/36 (83.33%), Query Frame = 0
Query: 2 DLPRGCLLGGNTSALHVQGHATRLLQGRSTKVFKRA 37
D+ CLLGGNT+ LHVQGHATRLLQG STKV KRA
Sbjct: 10 DVVVSCLLGGNTTTLHVQGHATRLLQGHSTKVLKRA 45 The following BLAST results are available for this feature:
BLAST of EWM21377.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 7
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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