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Properties
| Property Name | Value |
|---|
| Product | IKI3 family elongator complex protein |
| Orig transcript id | gnl|cribi|Naga_100215g9.1637.mrna |
| Orig protein id | gnl|cribi|Naga_100215g9.1637 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037252.1 | supercontig | KK037252.1:361412..363078 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna9314 ID=rna9314|Name=rna9314|organism=Nannochloropsis gaditana|type=mRNA|length=1752bp
CCTTTTCTTGGTGAAGGCATTCGCTTCAGTAGGTGACATGTATACACTAT
AAAAGCTCCTGGAGTCATCTTCACAAATGTTTTGAAAGCCCATCTTCCAC
TCGAGGACCACATATTAAAGAGTGGAGAGAACCTTTAACCTCCCCACCCT
GTTGACCTCAGGACCTCTGTGGGATTTTTCAGGACAAACTCATTCAGGGC
AGTGACCCGTCCTGGTTTAGGAGGATGTGCTCGTACTGCTTCTATGGCAA
CATTTGAAACTGTGTAACAGCAGGCGAAGTGGGGGATTTTTCATGATGTG
ACCCCTGTTTTTGTCAGACTGCGACATAACCCCTCCTAGCTCTTTTGTTG
TGCCAAGCCCGGTGGGGTGTTTCCCATCTTTTCCGCTTTTCCTCCGATCC
ATTAGCCCTCAACCAGTTCGAAAGCTTATATTCTACCCACTCAAGACAGA
GACACACCATGAGCGACGCTGCTGACTCCCTGTCTTCCTCTCCTCTCGGT
CCTACCCTGCCGCCCAACGCGACCTCCCCACCCTCCCGCGCTTCCTCCCC
TCCCTCCATCACCGACGATACCGCTCCTCCTGTCGAGCAATTGCGCCTGC
ATCTTCGCGAAGTCTTTGTGTACGCCGTGCCTCGCCTGGTTTCCTCCACA
GGGTATAGGGCGGAGGACCTGAACCTTCCCAACCCATTGTTGACTGGCTA
CCTCAAAGCATTCCAGCGGGGTGACACGGACCTGTTCCTCCGGATCTTCC
AGCCCGACCACACCCTGTTCGCAGAATGCCCCATCCATGTGTTGCCGGGG
AAGAAGGACCCATTGGGCAGCTTTTTCATTCCCGTCGTGGACTCCTCCAG
GTATTTCGTCGTCAAAGCTGTGGACCGGCGGCGGCACGCCTTCATCGCAA
TCGGATTCCGGGAGCGGAGCGATGCATTTGATCTCAAGGCGCTTCTGGAG
GACTTGGTCACGTACAATGCCAGGGCGGAGCTGGCGAGACGGAGGACCCA
GGCACTGGACTCACGGGCGGGGAGGCCGGATGATGGAAGTGGAAGGGAGG
AGACAGGGGATGTGGTGGGAACGGAGGACGGCAAGGAAGGGAAAGACGGG
GCGAACGGATCTTTTCTACCGGTTTTCCAAGATTTGAGTTTAAAAGAAGG
GGAGACTCTCAAATTGAATTTGGTGCATGCCCTGGAAAAAAAAGAAGGGG
AAGGAGAGAGGAAAGAGGTTGGGAGACGGAAACACCGGGCGGGCTCGTCC
GAGCTTTATCCAGGGGAAAACGTGCGTCCCCCGTCCCTCCTACCATTGCC
ACCGAAAGCCATGCCGCGCAGGCCGACGGATCTCTCCGTGCCAGCCACGC
AGGTCCCGGTGGAGGTCCCGGAGGAGGAATGGGGGGACTTTGTAGGGCGG
GCAGAGGGGGAGGGGGGGGTCAAGAGGAACAGACGGTGTGACGCAAAGAG
GAGAAGGGGAACGATACACGGGCATACGTTTGCCGCGCCAGGCGCCAGAA
AGGTGGGAACGAGGTTCTTTTCCGCGACAGTGCGAGCTTTTTCGGTCATT
CTTTCCCTGTTTAAAAAAAAAATGCTGTACATGCTTGATTTATCCTGCCC
CCGCGGCTGACAGACTTCCGGCCTGTGGAATTTTGCTGACCCGTTTCCGT
GAAATATCATAGGTACAGCACACAACGTTCCCCTGGGGACGCCTGGCTGT
CACCGTTCGCGTCTCACGCTCTAATTCCACTCGCCCTTGTCCTGCTCCCC
CC back to topprotein sequence of rna9314 >rna9314-protein ID=rna9314-protein|Name=rna9314|organism=Nannochloropsis gaditana|type=polypeptide|length=412bp
MACVLSTGLVHVFQEGQGALFGDKPHEEHWLVDPVCSFHEPALSDTRQLV
LLRTAPELGPEGGEEETPEEFSLLTVRWDEERQSDVLVEVTFAIPSSAIP
SLSSSRSPSSTIVITSLDEAGVASDEENIAREDVSTSAQRSGHPLDSSRI
LRLQAWGGWKGNAALIETHEGAIYKYTRRRGLKKGGKEAHRSITWIMDML
EPCPWVGVVNVGGKKEGGGGGEVGRGEVVGLSTRARLYYGEHLLCNAVAS
VTVNPAFGMLMYVTLGSQPTLRFVTFRSLAGLDVMGGSEGGVVECPTEGR
PVERGSRLIMSSFTSSTVLLQLPRGNLEVAAPHPLVLHQAARLLEVGRYG
QAFSLLRRHRLDLNFMIDFAPRKFLEEVERLVVPQFGKLEDLNVFVSAVR
DGDCVGGGSSSL back to topmRNA from alignment at KK037252.1:361412..363078+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna9314 ID=rna9314|Name=rna9314|organism=Nannochloropsis gaditana|type=mRNA|length=1667bp|location=Sequence derived from alignment at KK037252.1:361412..363078+ (Nannochloropsis gaditana)
ATGGCCTGCGTACTTTCCACGGGGCTCGTGCACGTCTTTcaagaggggca
aggggcacTTTTTGGGGACAAGGTACGCCGAAACGggtccgcccgccctc
ctccctccctcccttctccctccctccttcccttcgttctgcctcctttt
ttctcgcGTTGTTTCTTTCTTGCCGGCCTCATTCCTGTCTTCTCTGTCGT
GCATGCACAGCCTCATGAGGAGCACTGGCTCGTGGACCCTGTGTGCAGTT
TTCACGAACCCGCTCTCTCAGATACCCGGCAGCTGGTTTTACTTCGGACT
GCCCCTGAATTAggaccggagggaggagaggaagaaacacCGGAGGAATT
TTCTCTGTTGACAGTGcggtgggacgaggagcggCAGAGCGACGTattgg
tggaggtgacgtTTGcaatcccttcctcggccatCCCAAGCCTTTCgtcc
tcccgttccccttcctcgacgaTTGTCATCACCAGTCTCGATGAGGCGGG
AGTGGCGTCCGATGAAGAAAATATAGCACGTGAAGACGTCAGCACAAGTG
CGCAGAGGTCAGGGCATCCTTTGGATTCCTCACGAATTTTGCGGTTGCAG
GCatggggaggttggaaggGGAATGCTGCTTTGATCGAAACGCACGAGGG
AGCCATTTACAAATACAcgcgaagacgaggattaaagaaaggaggaaagg
aagcgcatCGGTCGATCACATGGATCATGGACATGTTGGAGCCGTGCCCG
TGGGTGGGTGTGGTAAatgtgggagggaagaaggagggaggagggggagg
ggaggttgggcggggggaggtggtgggacTCTCCACGCGTGCACGTCTCT
ATTACGGAGAGCACCTTTTGTGCAATGCGGTGGCTTCCGTGACAGTTAAT
CCTGCGTTTGGTATGCTCATGTACGTCACTTTGGGCTCCCAACCGACTTT
ACGGTTTGTGACCTTTCGGAGCCTTGCCGGCCTTGACgtgatgggaggga
gcgaggggggggtagTGGAATGCCCCACGGAGGGCCGACCGGTGGAACGA
GGGTCCCGCCTGATtatgtcctccttcacgtcttCCACCGTGCTTCTGCA
ACTCCCTCGCGGCAACCTGGAAGTGGCCGCGCCCCATCCTTTGGTCTTGC
ATCAAGCTGCCCGTCtcctggaggtggggaggtacGGGCAGGCTTTCTCA
CTCCTTCGGCGGCATCGTTTGGACTTGAATTTTATGATCGATTTCGCCCC
TCGGAAAtttttggaggaggtggaacggTTGGTAGTGCCTCAATTTGGGA
AGCTGGAGGATTTGAACGTCTTTGTCTCGGCTGTGCGGGACGGAGATTGT
Gttgggggaggtagaggagggaggagggaggaggggagggcctggtggtg
CATTCGGACTcacgtcgaggaggaggaggaggaagaagaggttgcggagg
aggtgaaggagtgGTTCccggcgggaaagaggaatcGGGTTTGTGAAAAG
GTGCGAGAAGTGTTGTTGGGACGCATGGCGGTGGCGaggttgggggaggg
gaagggaggaagggatggagagaaaaagggagggcatggtgggAAGGCGC
AAGCTGACGTGCGTGTAATGGAATGTGTGTTGACCACGCTGGCCCATCAg
gttcctcctcgctttga back to topCoding sequence (CDS) from alignment at KK037252.1:361412..363078+ >rna9314 ID=rna9314|Name=rna9314|organism=Nannochloropsis gaditana|type=CDS|length=3717bp|location=Sequence derived from alignment at KK037252.1:361412..363078+ (Nannochloropsis gaditana)
ATGGCCTGCGTACTTTCCACGGGGCTCGTGCACGTCTTTcaagaggggca
aggggcacTTTTTGGGGACAAGCCTCATGAGGAGCACTGGCTCGTGGACC
CTGTGTGCAGTTTTCACGAACCCGCTCTCTCAGATACCCGGCAGCTGGTT
TTACTTCGGACTGCCCCTGAATTAggaccggagggaggagaggaagaaac
acCGGAGGAATTTTCTCTGTTGACAGTGcggtgggacgaggagcggCAGA
GCGACGTattggtggaggtgacgtTTGcaatcccttcctcggccatCCCA
AGCCTTTCgtcctcccgttccccttcctcgacgaTTGTCATCACCAGTCT
CGATGAGGCGGGAGTGGCGTCCGATGAAGAAAATATAGCACGTGAAGACG
TCAGCACAAGTGCGCAGAGGTCAGGGCATCCTTTGGATTCCTCACGAATT
TTGCGGTTGCAGGCatggggaggttggaaggGGAATGCTGCTTTGATCGA
AACGCACGAGGGAGCCATTTACAAATACAcgcgaagacgaggattaaaga
aaggaggaaaggaagcgcatCGGTCGATCACATGGATCATGGACATGTTG
GAGCCGTGCCCGTGGGTGGGTGTGGTAAatgtgggagggaagaaggaggg
aggagggggaggggaggttgggcggggggaggtggtgggacTCTCCACGC
GTGCACGTCTCTATTACGGAGAGCACCTTTTGTGCAATGCGGTGGCTTCC
GTGACAGTTAATCCTGCGTTTGGTATGCTCATGTACGTCACTTTGGGCTC
CCAACCGACTTTACGGTTTGTGACCTTTCGGAGCCTTGCCGGCCTTGACg
tgatgggagggagcgaggggggggtagTGGAATGCCCCACGGAGGGCCGA
CCGGTGGAACGAGGGTCCCGCCTGATtatgtcctccttcacgtcttCCAC
CGTGCTTCTGCAACTCCCTCGCGGCAACCTGGAAGTGGCCGCGCCCCATC
CTTTGGTCTTGCATCAAGCTGCCCGTCtcctggaggtggggaggtacGGG
CAGGCTTTCTCACTCCTTCGGCGGCATCGTTTGGACTTGAATTTTATGAT
CGATTTCGCCCCTCGGAAAtttttggaggaggtggaacggTTGGTAGTGC
CTCAATTTGGGAAGCTGGAGGATTTGAACGTCTTTGTCTCGGCTGTGCGG
GACGGAGATTGTGttgggggaggttcctcctcgctttgaATGGCCTGCGT
ACTTTCCACGGGGCTCGTGCACGTCTTTcaagaggggcaaggggcacTTT
TTGGGGACAAGCCTCATGAGGAGCACTGGCTCGTGGACCCTGTGTGCAGT
TTTCACGAACCCGCTCTCTCAGATACCCGGCAGCTGGTTTTACTTCGGAC
TGCCCCTGAATTAggaccggagggaggagaggaagaaacacCGGAGGAAT
TTTCTCTGTTGACAGTGcggtgggacgaggagcggCAGAGCGACGTattg
gtggaggtgacgtTTGcaatcccttcctcggccatCCCAAGCCTTTCgtc
ctcccgttccccttcctcgacgaTTGTCATCACCAGTCTCGATGAGGCGG
GAGTGGCGTCCGATGAAGAAAATATAGCACGTGAAGACGTCAGCACAAGT
GCGCAGAGGTCAGGGCATCCTTTGGATTCCTCACGAATTTTGCGGTTGCA
GGCatggggaggttggaaggGGAATGCTGCTTTGATCGAAACGCACGAGG
GAGCCATTTACAAATACAcgcgaagacgaggattaaagaaaggaggaaag
gaagcgcatCGGTCGATCACATGGATCATGGACATGTTGGAGCCGTGCCC
GTGGGTGGGTGTGGTAAatgtgggagggaagaaggagggaggagggggag
gggaggttgggcggggggaggtggtgggacTCTCCACGCGTGCACGTCTC
TATTACGGAGAGCACCTTTTGTGCAATGCGGTGGCTTCCGTGACAGTTAA
TCCTGCGTTTGGTATGCTCATGTACGTCACTTTGGGCTCCCAACCGACTT
TACGGTTTGTGACCTTTCGGAGCCTTGCCGGCCTTGACgtgatgggaggg
agcgaggggggggtagTGGAATGCCCCACGGAGGGCCGACCGGTGGAACG
AGGGTCCCGCCTGATtatgtcctccttcacgtcttCCACCGTGCTTCTGC
AACTCCCTCGCGGCAACCTGGAAGTGGCCGCGCCCCATCCTTTGGTCTTG
CATCAAGCTGCCCGTCtcctggaggtggggaggtacGGGCAGGCTTTCTC
ACTCCTTCGGCGGCATCGTTTGGACTTGAATTTTATGATCGATTTCGCCC
CTCGGAAAtttttggaggaggtggaacggTTGGTAGTGCCTCAATTTGGG
AAGCTGGAGGATTTGAACGTCTTTGTCTCGGCTGTGCGGGACGGAGATTG
TGttgggggaggttcctcctcgctttgaATGGCCTGCGTACTTTCCACGG
GGCTCGTGCACGTCTTTcaagaggggcaaggggcacTTTTTGGGGACAAG
CCTCATGAGGAGCACTGGCTCGTGGACCCTGTGTGCAGTTTTCACGAACC
CGCTCTCTCAGATACCCGGCAGCTGGTTTTACTTCGGACTGCCCCTGAAT
TAggaccggagggaggagaggaagaaacacCGGAGGAATTTTCTCTGTTG
ACAGTGcggtgggacgaggagcggCAGAGCGACGTattggtggaggtgac
gtTTGcaatcccttcctcggccatCCCAAGCCTTTCgtcctcccgttccc
cttcctcgacgaTTGTCATCACCAGTCTCGATGAGGCGGGAGTGGCGTCC
GATGAAGAAAATATAGCACGTGAAGACGTCAGCACAAGTGCGCAGAGGTC
AGGGCATCCTTTGGATTCCTCACGAATTTTGCGGTTGCAGGCatggggag
gttggaaggGGAATGCTGCTTTGATCGAAACGCACGAGGGAGCCATTTAC
AAATACAcgcgaagacgaggattaaagaaaggaggaaaggaagcgcatCG
GTCGATCACATGGATCATGGACATGTTGGAGCCGTGCCCGTGGGTGGGTG
TGGTAAatgtgggagggaagaaggagggaggagggggaggggaggttggg
cggggggaggtggtgggacTCTCCACGCGTGCACGTCTCTATTACGGAGA
GCACCTTTTGTGCAATGCGGTGGCTTCCGTGACAGTTAATCCTGCGTTTG
GTATGCTCATGTACGTCACTTTGGGCTCCCAACCGACTTTACGGTTTGTG
ACCTTTCGGAGCCTTGCCGGCCTTGACgtgatgggagggagcgagggggg
ggtagTGGAATGCCCCACGGAGGGCCGACCGGTGGAACGAGGGTCCCGCC
TGATtatgtcctccttcacgtcttCCACCGTGCTTCTGCAACTCCCTCGC
GGCAACCTGGAAGTGGCCGCGCCCCATCCTTTGGTCTTGCATCAAGCTGC
CCGTCtcctggaggtggggaggtacGGGCAGGCTTTCTCACTCCTTCGGC
GGCATCGTTTGGACTTGAATTTTATGATCGATTTCGCCCCTCGGAAAttt
ttggaggaggtggaacggTTGGTAGTGCCTCAATTTGGGAAGCTGGAGGA
TTTGAACGTCTTTGTCTCGGCTGTGCGGGACGGAGATTGTGttgggggag
gttcctcctcgctttga back to top
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