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Properties
| Property Name | Value |
|---|
| Product | peptidyl-prolyl isomerase fkbp12 |
| Orig transcript id | gnl|cribi|Naga_100300g3.3770.mrna |
| Orig protein id | gnl|cribi|Naga_100300g3.3770 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037252.1 | supercontig | KK037252.1:324466..326655 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna9301 ID=rna9301|Name=rna9301|organism=Nannochloropsis gaditana|type=mRNA|length=2042bp
AGACAGAAGACGCGCAGAAAGCAAGCCTGCGGTCCTGCGCCATGGCTGGG
CGGTGGGATGAATCTGGAGGCATTTAGCAGGTTGAAATATGTTTTTGTTC
CTGGTTGACCTTTTTTTATGACTTTTCAGGAAATTTTGACGTTTCGCCCG
TAATCTCAGGGAGGGGGAGACCTCAAGGCCGGCCCAGACCCAAGTGCTAA
GGAGACAGAGGCCATTCTATCCATGCGGAACGGGAAAAGCAGCGTTGGCG
GGGGCAACACTACCATAAACTACGCGGATGTAGCCCATACCACGGTAACC
ACGCCGGTTGCGTCCAAATCTGTTGGAGGGGCGAAGCGGAAACAAGCCGC
CATCACCAAAAATGAACGGCGGCACCCGGAGGCCGGGGCCCGCACGGGGG
GAGACAGGGCCGGAGGGCCCACAGTGAGGGATGTGGCGGTAGACAAGGAG
AATCGTCGGCGGCAGGGGGCAACGGGAGGGAACGGGCGGGACAAAGAGGA
GATGGGAAGGGAGAGGGCGGGAGGCGACCTGTCCAAGGCCGCGAAACGGG
CCAAGCCTTCCGGCCCCATCACTTCCGTCCCTCCGCCCCCATCACATCCT
CAATCTTCGCCTTCGGCTCCCTCCTCCTCCTCCTCCTCCGCCTCGGGGGC
CCAGCCGGCCAGTGTGCGCTACCCTCGTCTGAACTACGCCGAAGCCGTGC
CGCCCACCGAACGGACTTTCATCTCCCCTGACGTACCGGACACGGACAAG
CTCCTGTATTTGGCGTCGCGCGTGATGGAAGCCGATACCTTGCAGGTGGA
ACGGATGCTGATGTCGACCAAGTACCAGCATTTGTCGCACGAGATGGAGA
AGTACGCGGGCATGGTGGGGAAACGCCTGCGTCGGGTCTTGGAGGAGGAC
GCGAGGGCCGAGGTCGCCGAGTTGGGGGAACTGGAGCGCCTCCGTCGGGA
AAGGAGGGAGGCTGTTGCGGCCTGCGACGCCCTGGACGAGGAGGCCGGGA
AACTCCGCAAAGTTTTGAGGATATGGGAAGAAATGGACAGGGAGATGGAG
GTGGAGGGCGGTCGGTTTACGGACCAGGTGGGGGCGGCGCGGGCGGCGGA
AATGGAGCGGGCAGAGGGGGCCCTCGCGTCTCAAGAAAGGTCTCGAACCG
GTGGGACGGAGACGGCAGCCGGCTACACCTCCCCTGTGACGGAAGAAACC
TTGACGTTGCTGGCCCAGGGCCCCGGCATCCGCGCCCACATCCTGGAAAG
CGCCGGCCAACTGGTGGACGCCCTGGAGGGGAAAGTGGCGGAGGTGCGGC
AGGTGGAGGAAGCGGCGAAGGGGCAGCAAAAAGCTTTGGCCGCCGCGTTT
CGAGCCGTATCTTTTGCAGGAATCCCCGCCATGGGGGAGCCGGCGGTGGC
GCTGAAGCGGGCGGGGGGAGGGAAAATAAAGTGAGGGGCCGCAGAGGGGT
GGGACAGGGGGCAACGTGGGGTGTGAAAAAGTACGAAGGAGGTAGAGACA
GTGGCGATGGCGGGAGGCGAAGGGGGGAGACGGGCCAAGAAGGGAGGAAG
GCGGGGTCCATGGGGGAACCTGAGGCATATTCGGAGCGAGCATGGATATC
AGGCGGTGGGCGTGCAAGGAGGCTGCTGGCTCGCGGAAAGCCAGCTCCCC
TGGTAGGGAGGGAGGGAAAAGCCAGTGCGATTCGAGCAGGGGGGATTGCG
GCCTTTGTTTGCATCGGAAGCACAATAGGAAGGAGACGCGCCTGGAAGGA
AGTGTTGCTTGCCGATGGGGAGGGAGACAATGGGCCGAAACGCCGGAAGC
GGGTCCGAGAGGCCGAGGGCATCTCCAAAAGGAATATGTCGGGGATGAGA
GTGAGGGAATGTGACGGCGATGGCATCCGAAGGGGTGGGAAAGAATGCTT
CGTCCCTCCAGGAAGGGGAGTGGACGGGGAAAGGGGGGGGGAGCAAATAC
GGGGGGACTCGAGCGACAGGGAAAAAGCAATGACAGACATGTGCCGGACA
GTGATCTATGAAAAGAAAAATCCAATCAACGCATCAGGTGCC back to topprotein sequence of rna9301 >rna9301-protein ID=rna9301-protein|Name=rna9301|organism=Nannochloropsis gaditana|type=polypeptide|length=221bp
MDWISLISINNPLSNMAFEKVVMQEGTGPTPTPGSTVTVHCEGLGKNGDL
NAPFWSTKDPGQQPFTFQIGMGKVIRAWDEGVMTMKVGEKATIKATPDYA
YGAAGFPAWGIQPNSPLNFVIEVLSQEEREKGGVQVQRHLDVENLPATGT
LFLCGREGVSLDVCTSIFTNKSWREVERGEGGLWGSCEVKGFGQNKGREA
GSKEKNARKFESNVERDGRGT back to topmRNA from alignment at KK037252.1:324466..326655- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna9301 ID=rna9301|Name=rna9301|organism=Nannochloropsis gaditana|type=mRNA|length=2190bp|location=Sequence derived from alignment at KK037252.1:324466..326655- (Nannochloropsis gaditana)
ATGGATTGGTATGCTTTGGACTCTATGTGGGTGTAGTGTATAGTGGAGAT
GCTCAATACATCCAAAATTCGCATCGAGAGTACACCTCATGATATCAGAT
ATTGGCTAAGTCCGTCGGGCTAGACAGGGGAGGTTGGTGCGGCCGCTATT
GCAACTTTTTATGCGCACGTGACGATGACCGCACGGAGGGAAGGTGATAA
AATCACACAATTAACACGTACGACGACGAAAGAGGAAGAGTCATCGAGGA
AAAGTATACTTGTTTGCGTCACAGGGGTCGGAGTGGCACTAGGACATGTT
GAACCGTTACTGGGTCATAGCTTGTTTTGAGTATATTATCGTAAACCCTC
GCTCGGTTCCACATCTTCGGCTGCGAGCCGCGTTGCTACACCTTCAAATA
ATAGGGCTTGTCAGTATTTTTGTAAATGGGCGTTTGGTGCTTTATATCGG
AAAACGATAGATTTTGCTCCTCATCGTTTATTTTGGAGCCGAGAAAGCAT
ATTTTTCCTTCTCCCAAAGACTGTGGTATTGTACTTGAATCTTACACGCA
CTCACACAACTCTTTGGTCACGTGTCTCTCCTTCAAGGATCAGCTTGATC
TCGATAAATAATCCGCTATCAAATATGGCTTTTGAAAAAGTTGTCATGCA
GGAAGGGACGGGCCCGACTCCCACTCCAGGTAGGCATGTGATCTGACGAA
TGAATTGTTCATCGCATTCATGACATACACGATTCATCGCCGTGAGGTGT
TCATGTAGCCATGGTCAACGAAGAGATAAGACGTCCGGTGGCAAGTATCA
CTAGGATCACATGCCTGACGCCTTCGATCCCTTGCTTATCGATCGTTCTC
TGATTATTAGGCTCGACGGTAACCGTGCACTGCGAGGGCCTTGGGAAAAA
TGGCGATTTAAACGCGCCGTTTTGGTCGACCAAAGGTAGGACTGGATGCA
TGCGAGCATGGCGTTGTGACAGCATGACGAGTAATGGCGACGATTAAGCA
TGTGCTGGAAAGCTGGGCGATGAGCACAGAGTAGGGAAAGCTTGATCCTT
GGGAGAAGAAGCACTCAGGCCAAAATCTCGTATCTTGTGTTTTTACGCCG
GCACGCAGACCCCGGGCAGCAGCCTTTCACTTTCCAGATAGGCATGGGCA
AGGTGGGTTCGTTTCTACTCTCCCCTTTCCCGTCTCCCTATATTGGCACC
CTTTCCTTGCCAGGCTGTCGAGACGCAAGGGCTTTCTTTGCCTCCTCCTC
CACTCAAGCGTCCTCCTCAGCCACTGCATGTCTTCCCTCCTCTTTCGTTG
CCTGTCCCGGCACCCACATTGTCTGACGCACGCAATCTCTCCTCCCCTCT
CGCGTTCTCCCTTGTACCCTGCCATCCTTGCCCCAGGTGATCCGGGCCTG
GGACGAAGGCGTCATGACCATGAAAGTGGGGGAAAAAGCGACCATTAAGG
CGACGCCTGACTACGCCTATGGGGCCGCCGGATTTCCCGCATGGGGTACG
GGAGACGTGGGGGGGGAAGGCTCGGGGCTCATTGTGATCGGAGAGAGCGG
CGCAGAGATGGCGCGGCGAGGGCGAGACATAGTCTTTCCACTTATGTATC
CAAAGTCTTCCCACTTATATATACATAGCCTTCCCACTTATATATATATA
TATATAGTCTTCCCACTTATATGAAGGTGGTTTCTTGTCAAAGGATGATT
CAAAGGCCACATTGTCAAAGGATGATTCAAAGGCCAGATTGATGCCTTGA
GGGTGGTAGCTCCCTCATTTGGTTCCCTTGTGTTCCCCCTCCCACCAGGC
ATTCAGCCCAATTCTCCCCTCAACTTCGTCATTGAAGTGCTCTCTGTCAA
CTAAGCTGATCGGAAAGGAAGTACAAGCGCGGGAAACACTTTATCAAAGC
AGGAGGAGCGGGAGAAAGGAGGGGTACAGGTGCAAAGGCATTTAGACGTG
GAAAATCTTCCTGCGACGGGCACTCTTTTTCTTTGTGGGCGTGAGGGCGT
TAGTTTGGATGTTTGTACGTCGATTTTTACGAATAAGTCGTGGAGAGAAG
TGGAGCGGGGTGAAGGAGGGCTCTGGGGCTCATGTGAGGTGAAAGGTTTC
GGTCAAAATAAAGGGAGGGAAGCAGGAAGTAAAGAGAAAAATGCGCGTAA
ATTTGAATCAAATGTGGAACGGGATGGACGTGGCACCTGA back to topCoding sequence (CDS) from alignment at KK037252.1:324466..326655- >rna9301 ID=rna9301|Name=rna9301|organism=Nannochloropsis gaditana|type=CDS|length=4662bp|location=Sequence derived from alignment at KK037252.1:324466..326655- (Nannochloropsis gaditana)
CAGGAGGAGCGGGAGAAAGGAGGGGTACAGGTGCAAAGGCATTTAGACGT
GGAAAATCTTCCTGCGACGGGCACTCTTTTTCTTTGTGGGCGTGAGGGCG
TTAGTTTGGATGTTTGTACGTCGATTTTTACGAATAAGTCGTGGAGAGAA
GTGGAGCGGGGTGAAGGAGGGCTCTGGGGCTCATGTGAGGTGAAAGGTTT
CGGTCAAAATAAAGGGAGGGAAGCAGGAAGTAAAGAGAAAAATGCGCGTA
AATTTGAATCAAATGTGGAACGGGATGGACGTGGCACCTGAGCATTCAGC
CCAATTCTCCCCTCAACTTCGTCATTGAAGTGCTCTCTGTGATCCGGGCC
TGGGACGAAGGCGTCATGACCATGAAAGTGGGGGAAAAAGCGACCATTAA
GGCGACGCCTGACTACGCCTATGGGGCCGCCGGATTTCCCGCATGGGACC
CCGGGCAGCAGCCTTTCACTTTCCAGATAGGCATGGGCAAGGCTCGACGG
TAACCGTGCACTGCGAGGGCCTTGGGAAAAATGGCGATTTAAACGCGCCG
TTTTGGTCGACCAAAGGATCAGCTTGATCTCGATAAATAATCCGCTATCA
AATATGGCTTTTGAAAAAGTTGTCATGCAGGAAGGGACGGGCCCGACTCC
CACTCCAGATGGATTGCAGGAGGAGCGGGAGAAAGGAGGGGTACAGGTGC
AAAGGCATTTAGACGTGGAAAATCTTCCTGCGACGGGCACTCTTTTTCTT
TGTGGGCGTGAGGGCGTTAGTTTGGATGTTTGTACGTCGATTTTTACGAA
TAAGTCGTGGAGAGAAGTGGAGCGGGGTGAAGGAGGGCTCTGGGGCTCAT
GTGAGGTGAAAGGTTTCGGTCAAAATAAAGGGAGGGAAGCAGGAAGTAAA
GAGAAAAATGCGCGTAAATTTGAATCAAATGTGGAACGGGATGGACGTGG
CACCTGAGCATTCAGCCCAATTCTCCCCTCAACTTCGTCATTGAAGTGCT
CTCTGTGATCCGGGCCTGGGACGAAGGCGTCATGACCATGAAAGTGGGGG
AAAAAGCGACCATTAAGGCGACGCCTGACTACGCCTATGGGGCCGCCGGA
TTTCCCGCATGGGACCCCGGGCAGCAGCCTTTCACTTTCCAGATAGGCAT
GGGCAAGGCTCGACGGTAACCGTGCACTGCGAGGGCCTTGGGAAAAATGG
CGATTTAAACGCGCCGTTTTGGTCGACCAAAGGATCAGCTTGATCTCGAT
AAATAATCCGCTATCAAATATGGCTTTTGAAAAAGTTGTCATGCAGGAAG
GGACGGGCCCGACTCCCACTCCAGATGGATTGCAGGAGGAGCGGGAGAAA
GGAGGGGTACAGGTGCAAAGGCATTTAGACGTGGAAAATCTTCCTGCGAC
GGGCACTCTTTTTCTTTGTGGGCGTGAGGGCGTTAGTTTGGATGTTTGTA
CGTCGATTTTTACGAATAAGTCGTGGAGAGAAGTGGAGCGGGGTGAAGGA
GGGCTCTGGGGCTCATGTGAGGTGAAAGGTTTCGGTCAAAATAAAGGGAG
GGAAGCAGGAAGTAAAGAGAAAAATGCGCGTAAATTTGAATCAAATGTGG
AACGGGATGGACGTGGCACCTGAGCATTCAGCCCAATTCTCCCCTCAACT
TCGTCATTGAAGTGCTCTCTGTGATCCGGGCCTGGGACGAAGGCGTCATG
ACCATGAAAGTGGGGGAAAAAGCGACCATTAAGGCGACGCCTGACTACGC
CTATGGGGCCGCCGGATTTCCCGCATGGGACCCCGGGCAGCAGCCTTTCA
CTTTCCAGATAGGCATGGGCAAGGCTCGACGGTAACCGTGCACTGCGAGG
GCCTTGGGAAAAATGGCGATTTAAACGCGCCGTTTTGGTCGACCAAAGGA
TCAGCTTGATCTCGATAAATAATCCGCTATCAAATATGGCTTTTGAAAAA
GTTGTCATGCAGGAAGGGACGGGCCCGACTCCCACTCCAGATGGATTGCA
GGAGGAGCGGGAGAAAGGAGGGGTACAGGTGCAAAGGCATTTAGACGTGG
AAAATCTTCCTGCGACGGGCACTCTTTTTCTTTGTGGGCGTGAGGGCGTT
AGTTTGGATGTTTGTACGTCGATTTTTACGAATAAGTCGTGGAGAGAAGT
GGAGCGGGGTGAAGGAGGGCTCTGGGGCTCATGTGAGGTGAAAGGTTTCG
GTCAAAATAAAGGGAGGGAAGCAGGAAGTAAAGAGAAAAATGCGCGTAAA
TTTGAATCAAATGTGGAACGGGATGGACGTGGCACCTGAGCATTCAGCCC
AATTCTCCCCTCAACTTCGTCATTGAAGTGCTCTCTGTGATCCGGGCCTG
GGACGAAGGCGTCATGACCATGAAAGTGGGGGAAAAAGCGACCATTAAGG
CGACGCCTGACTACGCCTATGGGGCCGCCGGATTTCCCGCATGGGACCCC
GGGCAGCAGCCTTTCACTTTCCAGATAGGCATGGGCAAGGCTCGACGGTA
ACCGTGCACTGCGAGGGCCTTGGGAAAAATGGCGATTTAAACGCGCCGTT
TTGGTCGACCAAAGGATCAGCTTGATCTCGATAAATAATCCGCTATCAAA
TATGGCTTTTGAAAAAGTTGTCATGCAGGAAGGGACGGGCCCGACTCCCA
CTCCAGATGGATTGCAGGAGGAGCGGGAGAAAGGAGGGGTACAGGTGCAA
AGGCATTTAGACGTGGAAAATCTTCCTGCGACGGGCACTCTTTTTCTTTG
TGGGCGTGAGGGCGTTAGTTTGGATGTTTGTACGTCGATTTTTACGAATA
AGTCGTGGAGAGAAGTGGAGCGGGGTGAAGGAGGGCTCTGGGGCTCATGT
GAGGTGAAAGGTTTCGGTCAAAATAAAGGGAGGGAAGCAGGAAGTAAAGA
GAAAAATGCGCGTAAATTTGAATCAAATGTGGAACGGGATGGACGTGGCA
CCTGAGCATTCAGCCCAATTCTCCCCTCAACTTCGTCATTGAAGTGCTCT
CTGTGATCCGGGCCTGGGACGAAGGCGTCATGACCATGAAAGTGGGGGAA
AAAGCGACCATTAAGGCGACGCCTGACTACGCCTATGGGGCCGCCGGATT
TCCCGCATGGGACCCCGGGCAGCAGCCTTTCACTTTCCAGATAGGCATGG
GCAAGGCTCGACGGTAACCGTGCACTGCGAGGGCCTTGGGAAAAATGGCG
ATTTAAACGCGCCGTTTTGGTCGACCAAAGGATCAGCTTGATCTCGATAA
ATAATCCGCTATCAAATATGGCTTTTGAAAAAGTTGTCATGCAGGAAGGG
ACGGGCCCGACTCCCACTCCAGATGGATTGCAGGAGGAGCGGGAGAAAGG
AGGGGTACAGGTGCAAAGGCATTTAGACGTGGAAAATCTTCCTGCGACGG
GCACTCTTTTTCTTTGTGGGCGTGAGGGCGTTAGTTTGGATGTTTGTACG
TCGATTTTTACGAATAAGTCGTGGAGAGAAGTGGAGCGGGGTGAAGGAGG
GCTCTGGGGCTCATGTGAGGTGAAAGGTTTCGGTCAAAATAAAGGGAGGG
AAGCAGGAAGTAAAGAGAAAAATGCGCGTAAATTTGAATCAAATGTGGAA
CGGGATGGACGTGGCACCTGAGCATTCAGCCCAATTCTCCCCTCAACTTC
GTCATTGAAGTGCTCTCTGTGATCCGGGCCTGGGACGAAGGCGTCATGAC
CATGAAAGTGGGGGAAAAAGCGACCATTAAGGCGACGCCTGACTACGCCT
ATGGGGCCGCCGGATTTCCCGCATGGGACCCCGGGCAGCAGCCTTTCACT
TTCCAGATAGGCATGGGCAAGGCTCGACGGTAACCGTGCACTGCGAGGGC
CTTGGGAAAAATGGCGATTTAAACGCGCCGTTTTGGTCGACCAAAGGATC
AGCTTGATCTCGATAAATAATCCGCTATCAAATATGGCTTTTGAAAAAGT
TGTCATGCAGGAAGGGACGGGCCCGACTCCCACTCCAGATGGATTGCAGG
AGGAGCGGGAGAAAGGAGGGGTACAGGTGCAAAGGCATTTAGACGTGGAA
AATCTTCCTGCGACGGGCACTCTTTTTCTTTGTGGGCGTGAGGGCGTTAG
TTTGGATGTTTGTACGTCGATTTTTACGAATAAGTCGTGGAGAGAAGTGG
AGCGGGGTGAAGGAGGGCTCTGGGGCTCATGTGAGGTGAAAGGTTTCGGT
CAAAATAAAGGGAGGGAAGCAGGAAGTAAAGAGAAAAATGCGCGTAAATT
TGAATCAAATGTGGAACGGGATGGACGTGGCACCTGAGCATTCAGCCCAA
TTCTCCCCTCAACTTCGTCATTGAAGTGCTCTCTGTGATCCGGGCCTGGG
ACGAAGGCGTCATGACCATGAAAGTGGGGGAAAAAGCGACCATTAAGGCG
ACGCCTGACTACGCCTATGGGGCCGCCGGATTTCCCGCATGGGACCCCGG
GCAGCAGCCTTTCACTTTCCAGATAGGCATGGGCAAGGCTCGACGGTAAC
CGTGCACTGCGAGGGCCTTGGGAAAAATGGCGATTTAAACGCGCCGTTTT
GGTCGACCAAAGGATCAGCTTGATCTCGATAAATAATCCGCTATCAAATA
TGGCTTTTGAAAAAGTTGTCATGCAGGAAGGGACGGGCCCGACTCCCACT
CCAGATGGATTG back to top
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