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Properties
| Property Name | Value |
|---|
| Product | Nuclear pore localization protein Npl4, ubiquitin-like domain protein |
| Orig transcript id | gnl|cribi|Naga_100147g19.4600.mrna |
| Orig protein id | gnl|cribi|Naga_100147g19.4600 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037252.1 | supercontig | KK037252.1:292957..294844 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna9290 ID=rna9290|Name=rna9290|organism=Nannochloropsis gaditana|type=mRNA|length=1037bp
CCGAAACAGCACTGCAGACGCCTATGATACTATCTCCTTGACCTGACGAG
CGAGCCGGCAAAAGAGGACACCCATCCGCGCAAAGCGTCAGAGGTGGGGT
TAAATTGTCGGAGAGCCTCGAGTGCATCATGAGACTCAAAGCTCATGCAC
ATCGGGGCTCCAACCACGGGCGTGGCCTGCGAATGAAAATGGTGGCCCAA
AAATGGTCTATTAAAAAATCGACCTCCATGCCTCACTTGCCGGCGAATAA
GAAGACACAGGAGAATCGAGGAGCGGGGGAAGGAAGCAGAAGAAGAAGGA
GAGAACGAAGGCGACGACACAAAATGCGAGAACAGGTTGAGCGGTTGATG
ATGGTGCCCGGCGGCATGGGCGGGGACGGAAGTCTGAGCAAGGCGCAGCA
CGACACGAGGCAACCACTACAACGGTTGGCTGCACGCACAGCTTTAAAAT
TGTCTGTGCAGCATCCTGCTGCGTCCCTGGCAGTAATCGAGGGTCCAGTG
GAAAAAGTGCGGGGGCAACAGGCCGGCCCCCAGGCAGGAACCGAGGGAGA
AGTGAAGGGAGGGATCGAAGCAGGGTAGGGGACCTAGGCCTTGCGATTGA
GACAAACACGGCGGGGGGCTGGGAGACTGGTCAGAACGAAGCTTGCCGCC
TTTCCCGCACGTTGGCGCACGTCCATCGGGCCCCACGGCCCAGCAACCGC
CCGTGCCCCAACCTCCCCCTTGGCTTCGTCTTCCCTTCCTCTCTCCCTCT
CTCCCCCTCCCCCTCCCCCTCCCCGCCCTTCCAAAACCAAGGCCGAGAGC
CCCGTGCCCAACAATTTCCCGCGACAGGCTTGGCTCACTCGGATGACCTC
TCTTCGTCGCTGAGCACGGCCAGTCTCGACTGCCAGAGCAGCTCCCTCCC
CTGCGGCGATGGCCCCAGTGACCCTGACAGCAACAGCCCACGCTCCCATG
ACAGAGACGCCAACCACTCCGCTCCACCCGTCGTTAAGGCCTCCGACGCT
CTCCCTCCTAGCCTCGACGGCAGCAGCCACCCTCCCC back to topprotein sequence of rna9290 >rna9290-protein ID=rna9290-protein|Name=rna9290|organism=Nannochloropsis gaditana|type=polypeptide|length=448bp
MLLRVRSKMGTWRVEGVEPGTTIKALRSRILSEHGVSPHPSQVFSLDPAG
KRVMDDEQTVKSFNLQHGDLVHLAIREEDCAHEAGKKIAADGSIVNKTHL
EASRVKGFRPGMMSLRSMKMHWTLTDFVELDAQFEYKIKAQKNETPWCTK
AIMEPICGNDFQSYMRRVGFNQCRMGYLYGQFTEAKEAKVEVLYEPPQES
THEGFELLEDPRAEKVEALAAALGLVRVGWIFAHPPREEGFVFSGLEVMQ
AAMGQLEAADGVKETPFVTVRVSLAPVEKAGGEDGKEGGKEEVATVAHFD
AFQVSLQCMEMVAEGAIEPGPEPGAMLVNESFTAIVEGKPAPTVDVNFFL
VNVPVGSAESSLLTHRFPKANRLDELPSAAAMAAQLGEAGKAGWRFIDLM
SDFHLLLFLTDFLGMEEVAVLCRSVREKETVPLGAGHVDLLRAIAGME back to topmRNA from alignment at KK037252.1:292957..294844+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna9290 ID=rna9290|Name=rna9290|organism=Nannochloropsis gaditana|type=mRNA|length=1888bp|location=Sequence derived from alignment at KK037252.1:292957..294844+ (Nannochloropsis gaditana)
AATGCACAGGGACGAAATTGTACAGGCTCTATCGTTCTCCGGATTTTTGA
ACCGCAGGCGGCATGCTCCTGCGCGTGCGAAGCAAAATGGGCACATGGCG
tgtggaaggcgtggagCCAGGTACGACAATAAAGGCACTCCGCAGCCGCA
TTTTATCGGAGCATGGCGTCTCTCCACACCCTTCCCAGGTTTTTAGCCTT
GATCCGGCAGGGAAGCGGGTGATGGACGACGAACAGACGGTGAAATCGTT
CAATTTGCAGCATGGCGATCTGGTGCATTTGGCCATCCGAGAGGAGGATT
GTGCGCATGAGGCTGGGAAGAAAATTGCAGCCGATGGAAGTATTGTGAAT
AAGACACATTTGGAGGCGTCGCGTGTGAAAGGTTTTCGACCGGGGATGAT
GTCCTTGCGTAGCATGAAAATGCATTGGACACTCACTGATTTTGTGGAGC
TTGACGCTCAATTCGAGTACAAGATCAAGGCTCAAAAGAACGAGACCCCA
TGGTGCACTAAAGCCATCATGGAACCAATCTGCGGCAACGACTTTCAGGT
ATGCTTGCGCCCGTGCCATTCTTTTGTCCCGATCATTCTTTCTGCTCCCC
ccgctgcgtcctccctggaGCTACCAGCGTGCTGTTaccccgcccccttc
ttgcttccctccctcgctccctcctcccgtctctgccgccactccttccc
gctctttCGTTCCACCCATCTTTCCCATGCGTCCGCTTTGCTCCATGCCC
GCGCCTCGAGCCTTCTCACGCATCGTGGGCACTGACGGgcatgcccctcc
ctgtcccatttccccccccagtCTTACATGCGCCGCGTGGGGTTCAACCA
GTGCCGCATGGGCTACCTCTATGGCCAGTTCACcgaagcgaaggaggcga
aggtggaAGTGTTGTACGAACCACCTCAAGAAAGTAAGGCACCCCGagcg
gcggggcgggggggagtAGCCCCAATGAAGAAGCCTCCTCTCCGCACGAG
CATGGCCCTCaccgctctccttctcctttcccctgcccGGGCTATCCAGG
CACGCACGAAGGCTTCGAGCTGTTGGAAGACCCTCGGGCCGAGAaagtgg
aggccttggccgccgccttgggtCTGGTCCGAGTCGGATGGATCTTTGCG
CACCCTccccgggaggaaggcttcgtCTTCTCGGGCTTGGAGGTGATGCA
GGCTGCCATGGGCCAATTGGAGGCGGCAGACGGGGTGAAGGAGACGCCGT
TCGTGACGGTGCGGGTCTCCCTGGCCCcggtggagaaggcagggggcgag
gacgggaaggagggcgggaaggaggaagtagcGACGGTGGCGCATTTCGA
CGCCTTCCAGGTAAGCCTCCAGTGCATGGAGATGGTGGCCGAAGGCGCGA
TCGAGCCGGGGCCGGAGCCCGGGGCCATGCTCGTCAACGAATCCTTCACC
GCCATTGTGGAGGGAAAACCCGCGCCCACGGTGGATGTGAATTTTTTCCT
GGTCAACGTGCCCGTGGGGAGCGCGGAGAGCAGCCTTCTCACCCACCGCT
TCCCCAAGGCCAACCGCTTGGACGAGCTTCCGAGtgccgccgccatggcg
gcccagctgggggaggccgggaaggcggggtggCGTTTCATCGACTTGAT
GAGCGACTTCCACCTGCTCTTGTTCCTGACCGACTTtttgggcatggagg
aggtcgcggtCCTGTGTCGGAGcgtgcgggagaaggagacggtgcccttg
ggggcggggcaCGTGGACTTGCTCCGGGCGATCGCGGGGATGgagtagag
agggagggagggaaggagggagggcgggcgggcgaacatagaaaggaggg
gagacgaaCACCGCAAGAAATGAAAGATATTAACGCGC back to topCoding sequence (CDS) from alignment at KK037252.1:292957..294844+ >rna9290 ID=rna9290|Name=rna9290|organism=Nannochloropsis gaditana|type=CDS|length=4041bp|location=Sequence derived from alignment at KK037252.1:292957..294844+ (Nannochloropsis gaditana)
ATGCTCCTGCGCGTGCGAAGCAAAATGGGCACATGGCGtgtggaaggcgt
ggagCCAGGTACGACAATAAAGGCACTCCGCAGCCGCATTTTATCGGAGC
ATGGCGTCTCTCCACACCCTTCCCAGGTTTTTAGCCTTGATCCGGCAGGG
AAGCGGGTGATGGACGACGAACAGACGGTGAAATCGTTCAATTTGCAGCA
TGGCGATCTGGTGCATTTGGCCATCCGAGAGGAGGATTGTGCGCATGAGG
CTGGGAAGAAAATTGCAGCCGATGGAAGTATTGTGAATAAGACACATTTG
GAGGCGTCGCGTGTGAAAGGTTTTCGACCGGGGATGATGTCCTTGCGTAG
CATGAAAATGCATTGGACACTCACTGATTTTGTGGAGCTTGACGCTCAAT
TCGAGTACAAGATCAAGGCTCAAAAGAACGAGACCCCATGGTGCACTAAA
GCCATCATGGAACCAATCTGCGGCAACGACTTTCAGtCTTACATGCGCCG
CGTGGGGTTCAACCAGTGCCGCATGGGCTACCTCTATGGCCAGTTCACcg
aagcgaaggaggcgaaggtggaAGTGTTGTACGAACCACCTCAAGAAAGC
ACGCACGAAGGCTTCGAGCTGTTGGAAGACCCTCGGGCCGAGAaagtgga
ggccttggccgccgccttgggtCTGGTCCGAGTCGGATGGATCTTTGCGC
ACCCTccccgggaggaaggcttcgtCTTCTCGGGCTTGGAGGTGATGCAG
GCTGCCATGGGCCAATTGGAGGCGGCAGACGGGGTGAAGGAGACGCCGTT
CGTGACGGTGCGGGTCTCCCTGGCCCcggtggagaaggcagggggcgagg
acgggaaggagggcgggaaggaggaagtagcGACGGTGGCGCATTTCGAC
GCCTTCCAGGTAAGCCTCCAGTGCATGGAGATGGTGGCCGAAGGCGCGAT
CGAGCCGGGGCCGGAGCCCGGGGCCATGCTCGTCAACGAATCCTTCACCG
CCATTGTGGAGGGAAAACCCGCGCCCACGGTGGATGTGAATTTTTTCCTG
GTCAACGTGCCCGTGGGGAGCGCGGAGAGCAGCCTTCTCACCCACCGCTT
CCCCAAGGCCAACCGCTTGGACGAGCTTCCGAGtgccgccgccatggcgg
cccagctgggggaggccgggaaggcggggtggCGTTTCATCGACTTGATG
AGCGACTTCCACCTGCTCTTGTTCCTGACCGACTTtttgggcatggagga
ggtcgcggtCCTGTGTCGGAGcgtgcgggagaaggagacggtgcccttgg
gggcggggcaCGTGGACTTGCTCCGGGCGATCGCGGGGATGgagtagATG
CTCCTGCGCGTGCGAAGCAAAATGGGCACATGGCGtgtggaaggcgtgga
gCCAGGTACGACAATAAAGGCACTCCGCAGCCGCATTTTATCGGAGCATG
GCGTCTCTCCACACCCTTCCCAGGTTTTTAGCCTTGATCCGGCAGGGAAG
CGGGTGATGGACGACGAACAGACGGTGAAATCGTTCAATTTGCAGCATGG
CGATCTGGTGCATTTGGCCATCCGAGAGGAGGATTGTGCGCATGAGGCTG
GGAAGAAAATTGCAGCCGATGGAAGTATTGTGAATAAGACACATTTGGAG
GCGTCGCGTGTGAAAGGTTTTCGACCGGGGATGATGTCCTTGCGTAGCAT
GAAAATGCATTGGACACTCACTGATTTTGTGGAGCTTGACGCTCAATTCG
AGTACAAGATCAAGGCTCAAAAGAACGAGACCCCATGGTGCACTAAAGCC
ATCATGGAACCAATCTGCGGCAACGACTTTCAGtCTTACATGCGCCGCGT
GGGGTTCAACCAGTGCCGCATGGGCTACCTCTATGGCCAGTTCACcgaag
cgaaggaggcgaaggtggaAGTGTTGTACGAACCACCTCAAGAAAGCACG
CACGAAGGCTTCGAGCTGTTGGAAGACCCTCGGGCCGAGAaagtggaggc
cttggccgccgccttgggtCTGGTCCGAGTCGGATGGATCTTTGCGCACC
CTccccgggaggaaggcttcgtCTTCTCGGGCTTGGAGGTGATGCAGGCT
GCCATGGGCCAATTGGAGGCGGCAGACGGGGTGAAGGAGACGCCGTTCGT
GACGGTGCGGGTCTCCCTGGCCCcggtggagaaggcagggggcgaggacg
ggaaggagggcgggaaggaggaagtagcGACGGTGGCGCATTTCGACGCC
TTCCAGGTAAGCCTCCAGTGCATGGAGATGGTGGCCGAAGGCGCGATCGA
GCCGGGGCCGGAGCCCGGGGCCATGCTCGTCAACGAATCCTTCACCGCCA
TTGTGGAGGGAAAACCCGCGCCCACGGTGGATGTGAATTTTTTCCTGGTC
AACGTGCCCGTGGGGAGCGCGGAGAGCAGCCTTCTCACCCACCGCTTCCC
CAAGGCCAACCGCTTGGACGAGCTTCCGAGtgccgccgccatggcggccc
agctgggggaggccgggaaggcggggtggCGTTTCATCGACTTGATGAGC
GACTTCCACCTGCTCTTGTTCCTGACCGACTTtttgggcatggaggaggt
cgcggtCCTGTGTCGGAGcgtgcgggagaaggagacggtgcccttggggg
cggggcaCGTGGACTTGCTCCGGGCGATCGCGGGGATGgagtagATGCTC
CTGCGCGTGCGAAGCAAAATGGGCACATGGCGtgtggaaggcgtggagCC
AGGTACGACAATAAAGGCACTCCGCAGCCGCATTTTATCGGAGCATGGCG
TCTCTCCACACCCTTCCCAGGTTTTTAGCCTTGATCCGGCAGGGAAGCGG
GTGATGGACGACGAACAGACGGTGAAATCGTTCAATTTGCAGCATGGCGA
TCTGGTGCATTTGGCCATCCGAGAGGAGGATTGTGCGCATGAGGCTGGGA
AGAAAATTGCAGCCGATGGAAGTATTGTGAATAAGACACATTTGGAGGCG
TCGCGTGTGAAAGGTTTTCGACCGGGGATGATGTCCTTGCGTAGCATGAA
AATGCATTGGACACTCACTGATTTTGTGGAGCTTGACGCTCAATTCGAGT
ACAAGATCAAGGCTCAAAAGAACGAGACCCCATGGTGCACTAAAGCCATC
ATGGAACCAATCTGCGGCAACGACTTTCAGtCTTACATGCGCCGCGTGGG
GTTCAACCAGTGCCGCATGGGCTACCTCTATGGCCAGTTCACcgaagcga
aggaggcgaaggtggaAGTGTTGTACGAACCACCTCAAGAAAGCACGCAC
GAAGGCTTCGAGCTGTTGGAAGACCCTCGGGCCGAGAaagtggaggcctt
ggccgccgccttgggtCTGGTCCGAGTCGGATGGATCTTTGCGCACCCTc
cccgggaggaaggcttcgtCTTCTCGGGCTTGGAGGTGATGCAGGCTGCC
ATGGGCCAATTGGAGGCGGCAGACGGGGTGAAGGAGACGCCGTTCGTGAC
GGTGCGGGTCTCCCTGGCCCcggtggagaaggcagggggcgaggacggga
aggagggcgggaaggaggaagtagcGACGGTGGCGCATTTCGACGCCTTC
CAGGTAAGCCTCCAGTGCATGGAGATGGTGGCCGAAGGCGCGATCGAGCC
GGGGCCGGAGCCCGGGGCCATGCTCGTCAACGAATCCTTCACCGCCATTG
TGGAGGGAAAACCCGCGCCCACGGTGGATGTGAATTTTTTCCTGGTCAAC
GTGCCCGTGGGGAGCGCGGAGAGCAGCCTTCTCACCCACCGCTTCCCCAA
GGCCAACCGCTTGGACGAGCTTCCGAGtgccgccgccatggcggcccagc
tgggggaggccgggaaggcggggtggCGTTTCATCGACTTGATGAGCGAC
TTCCACCTGCTCTTGTTCCTGACCGACTTtttgggcatggaggaggtcgc
ggtCCTGTGTCGGAGcgtgcgggagaaggagacggtgcccttgggggcgg
ggcaCGTGGACTTGCTCCGGGCGATCGCGGGGATGgagtag back to top
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