EWM21419.1, cds9260 (CDS) Nannochloropsis gaditana

Overview
NameEWM21419.1
Unique Namecds9260
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037252.1:293019..293504 +
Alignment locationKK037252.1:293778..293889 +
Alignment locationKK037252.1:294006..294754 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM21419.1
ProductNuclear pore localization protein Npl4, ubiquitin-like domain protein
Orig transcript idgnl|cribi|Naga_100147g19.4600.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037252.1supercontigKK037252.1:293019..293504 +
KK037252.1supercontigKK037252.1:293778..293889 +
KK037252.1supercontigKK037252.1:294006..294754 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR029071Ubiquitin-rel_dom
IPR000626Ubiquitin-like
IPR024682Npl4_Ub-like_dom
IPR007717NPL4
Homology
BLAST of EWM21419.1 vs. NCBI_GenBank
Match: gi|585101647|gb|EWM21419.1| (Nuclear pore localization protein Npl4, ubiquitin-like domain protein [Nannochloropsis gaditana])

HSP 1 Score: 920.228 bits (2377), Expect = 0.000e+0
Identity = 448/448 (100.00%), Postives = 448/448 (100.00%), Query Frame = 0
Query:    1 MLLRVRSKMGTWRVEGVEPGTTIKALRSRILSEHGVSPHPSQVFSLDPAGKRVMDDEQTVKSFNLQHGDLVHLAIREEDCAHEAGKKIAADGSIVNKTHLEASRVKGFRPGMMSLRSMKMHWTLTDFVELDAQFEYKIKAQKNETPWCTKAIMEPICGNDFQSYMRRVGFNQCRMGYLYGQFTEAKEAKVEVLYEPPQESTHEGFELLEDPRAEKVEALAAALGLVRVGWIFAHPPREEGFVFSGLEVMQAAMGQLEAADGVKETPFVTVRVSLAPVEKAGGEDGKEGGKEEVATVAHFDAFQVSLQCMEMVAEGAIEPGPEPGAMLVNESFTAIVEGKPAPTVDVNFFLVNVPVGSAESSLLTHRFPKANRLDELPSAAAMAAQLGEAGKAGWRFIDLMSDFHLLLFLTDFLGMEEVAVLCRSVREKETVPLGAGHVDLLRAIAGME 448
            MLLRVRSKMGTWRVEGVEPGTTIKALRSRILSEHGVSPHPSQVFSLDPAGKRVMDDEQTVKSFNLQHGDLVHLAIREEDCAHEAGKKIAADGSIVNKTHLEASRVKGFRPGMMSLRSMKMHWTLTDFVELDAQFEYKIKAQKNETPWCTKAIMEPICGNDFQSYMRRVGFNQCRMGYLYGQFTEAKEAKVEVLYEPPQESTHEGFELLEDPRAEKVEALAAALGLVRVGWIFAHPPREEGFVFSGLEVMQAAMGQLEAADGVKETPFVTVRVSLAPVEKAGGEDGKEGGKEEVATVAHFDAFQVSLQCMEMVAEGAIEPGPEPGAMLVNESFTAIVEGKPAPTVDVNFFLVNVPVGSAESSLLTHRFPKANRLDELPSAAAMAAQLGEAGKAGWRFIDLMSDFHLLLFLTDFLGMEEVAVLCRSVREKETVPLGAGHVDLLRAIAGME
Sbjct:    1 MLLRVRSKMGTWRVEGVEPGTTIKALRSRILSEHGVSPHPSQVFSLDPAGKRVMDDEQTVKSFNLQHGDLVHLAIREEDCAHEAGKKIAADGSIVNKTHLEASRVKGFRPGMMSLRSMKMHWTLTDFVELDAQFEYKIKAQKNETPWCTKAIMEPICGNDFQSYMRRVGFNQCRMGYLYGQFTEAKEAKVEVLYEPPQESTHEGFELLEDPRAEKVEALAAALGLVRVGWIFAHPPREEGFVFSGLEVMQAAMGQLEAADGVKETPFVTVRVSLAPVEKAGGEDGKEGGKEEVATVAHFDAFQVSLQCMEMVAEGAIEPGPEPGAMLVNESFTAIVEGKPAPTVDVNFFLVNVPVGSAESSLLTHRFPKANRLDELPSAAAMAAQLGEAGKAGWRFIDLMSDFHLLLFLTDFLGMEEVAVLCRSVREKETVPLGAGHVDLLRAIAGME 448          
BLAST of EWM21419.1 vs. NCBI_GenBank
Match: gi|553190922|ref|XP_005855292.1| (nuclear protein localization 4-like protein [Nannochloropsis gaditana CCMP526] >gi|422293770|gb|EKU21070.1| nuclear protein localization 4-like protein [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 919.842 bits (2376), Expect = 0.000e+0
Identity = 447/448 (99.78%), Postives = 448/448 (100.00%), Query Frame = 0
Query:    1 MLLRVRSKMGTWRVEGVEPGTTIKALRSRILSEHGVSPHPSQVFSLDPAGKRVMDDEQTVKSFNLQHGDLVHLAIREEDCAHEAGKKIAADGSIVNKTHLEASRVKGFRPGMMSLRSMKMHWTLTDFVELDAQFEYKIKAQKNETPWCTKAIMEPICGNDFQSYMRRVGFNQCRMGYLYGQFTEAKEAKVEVLYEPPQESTHEGFELLEDPRAEKVEALAAALGLVRVGWIFAHPPREEGFVFSGLEVMQAAMGQLEAADGVKETPFVTVRVSLAPVEKAGGEDGKEGGKEEVATVAHFDAFQVSLQCMEMVAEGAIEPGPEPGAMLVNESFTAIVEGKPAPTVDVNFFLVNVPVGSAESSLLTHRFPKANRLDELPSAAAMAAQLGEAGKAGWRFIDLMSDFHLLLFLTDFLGMEEVAVLCRSVREKETVPLGAGHVDLLRAIAGME 448
            MLLRVRSKMGTWRVEGVEPGTTIKALRSRILSEHGVSPHPSQ+FSLDPAGKRVMDDEQTVKSFNLQHGDLVHLAIREEDCAHEAGKKIAADGSIVNKTHLEASRVKGFRPGMMSLRSMKMHWTLTDFVELDAQFEYKIKAQKNETPWCTKAIMEPICGNDFQSYMRRVGFNQCRMGYLYGQFTEAKEAKVEVLYEPPQESTHEGFELLEDPRAEKVEALAAALGLVRVGWIFAHPPREEGFVFSGLEVMQAAMGQLEAADGVKETPFVTVRVSLAPVEKAGGEDGKEGGKEEVATVAHFDAFQVSLQCMEMVAEGAIEPGPEPGAMLVNESFTAIVEGKPAPTVDVNFFLVNVPVGSAESSLLTHRFPKANRLDELPSAAAMAAQLGEAGKAGWRFIDLMSDFHLLLFLTDFLGMEEVAVLCRSVREKETVPLGAGHVDLLRAIAGME
Sbjct:    1 MLLRVRSKMGTWRVEGVEPGTTIKALRSRILSEHGVSPHPSQIFSLDPAGKRVMDDEQTVKSFNLQHGDLVHLAIREEDCAHEAGKKIAADGSIVNKTHLEASRVKGFRPGMMSLRSMKMHWTLTDFVELDAQFEYKIKAQKNETPWCTKAIMEPICGNDFQSYMRRVGFNQCRMGYLYGQFTEAKEAKVEVLYEPPQESTHEGFELLEDPRAEKVEALAAALGLVRVGWIFAHPPREEGFVFSGLEVMQAAMGQLEAADGVKETPFVTVRVSLAPVEKAGGEDGKEGGKEEVATVAHFDAFQVSLQCMEMVAEGAIEPGPEPGAMLVNESFTAIVEGKPAPTVDVNFFLVNVPVGSAESSLLTHRFPKANRLDELPSAAAMAAQLGEAGKAGWRFIDLMSDFHLLLFLTDFLGMEEVAVLCRSVREKETVPLGAGHVDLLRAIAGME 448          
BLAST of EWM21419.1 vs. NCBI_GenBank
Match: gi|299117192|emb|CBN75156.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 410.609 bits (1054), Expect = 2.566e-137
Identity = 227/460 (49.35%), Postives = 294/460 (63.91%), Query Frame = 0
Query:    1 MLLRVRSKMGTWRVEGVEPGTTIKALRSRILSEHG--VSPHPSQVFSLDPAGKRVMDD---EQTVKSFNLQHGDLVHLAIRE--EDCAHEAG---KKIAADGSIVNKTHLEASRVKGFRPGMMSLRSMKMHWTLTDFVELDAQFEYKIKAQKNETPWCTKAIMEPICGNDFQSYMRRVGFNQCRMGYLYGQFTEAK-EAKVEVLYEPPQESTHEGFELLEDPRAEKVEALAAALGLVRVGWIFAHPPREEGFVFSGLEVMQAAMGQLEAADGVKETPFVTVRVSLAPVEKAGGEDGKEGGKEEVATVAHFDAFQVSLQCMEMVAEGAIEPGPEPGAMLVNESFTAIVEGKPAPTVDVNFFLVNVPVGSAESSLLTHRFPKANRLDELPSAAAMAAQLGEAGKAGWRFIDLMSDFHLLLFLTDFLGME-EVAVLCRSVREKETVPLGAGHVDLLRAIAGME 448
            M++RVR+  G WRV  V P TTIK LR R+ +EH   +S    Q  +L P  +   D    E T++S  L HGD++HL + E   D AHE     K+I  DG+I  ++  E S   GFRPGMMSLRSMKM WTL DF E++ QF +++K  K E   CTK  ++    N FQS++R+ GF++ RMGYLYG FT+   + +VE +YEPPQE+  EGF++ EDP+A+ VEALA  LGL RVGWIFAHPPREEGF+FS  EV+ AA  QLEAADGV +TPFVTV+V+         EDG           AHFDAFQVS QCMEMVAEGA+E G  PG  +V ++FTAIVE K A  VD   FL  VP+   ES+   H FP+ANR   + +   +  QLG AG  G+ ++D++SDFHLLLFLT FL M+ ++  +C SV ++E  PL  G   L+   AG++
Sbjct:    1 MIIRVRTHAGVWRVNDVAPDTTIKELRQRLSTEHNANLSDDTRQPLTLKPNPRGDQDTLALESTLQSLGLGHGDMIHLNLDESIRDMAHEEAGGPKRINKDGTIEQQSFDEISNKTGFRPGMMSLRSMKMKWTLADFTEMNDQFTFRLK--KPEKGVCTKVSLDSAACNSFQSFVRQFGFHRARMGYLYGHFTDDDTKVRVECVYEPPQENYPEGFQVSEDPKADTVEALAGLLGLKRVGWIFAHPPREEGFLFSSAEVVTAATLQLEAADGVNDTPFVTVKVT-------AEEDGS----------AHFDAFQVSKQCMEMVAEGALEVGENPGHCMVPKTFTAIVEMKEAKEVDTTMFLNTVPIEQHESAKFLHDFPRANRDGVMQTWDDVKRQLGRAGGQGFTYMDVLSDFHLLLFLTAFLDMQTDMPKICDSVVDREK-PLDDGFKFLINNFAGLD 440          
BLAST of EWM21419.1 vs. NCBI_GenBank
Match: gi|1214671193|gb|OWY95293.1| (NPL4-like protein [Phytophthora megakarya])

HSP 1 Score: 328.946 bits (842), Expect = 1.662e-105
Identity = 198/454 (43.61%), Postives = 276/454 (60.79%), Query Frame = 0
Query:    1 MLLRVRSKMGTWRVEGVEPGTTIKALRSRILSEHGVSPHPSQVFSLDPAGKRVMDDEQTVKSFNLQHGDLVHLAIREE--DCAHEAGKKIAADGSIVNKTHLEASRVKGFRPGMMSLRSMKMHWTLTDFVELDAQFEYKIKAQKNETPWCTKAIMEPICGNDFQSYMRRVGFNQCRMGYLYGQF-TEAKEAKVEVLYEPPQESTHEGFELLEDPRAEKVEALAAALGLVRVGWIFAHPPRE-EGFVFSGLEVMQAAMGQLEAADGVKETPFVTVRVSLAPVEKAGGEDGKEGGKEEVATVAHFDAFQVSLQCMEMVAEGAI-EPGPEPGAMLVNESFTAIVEGKPAPTVDVNFFLVNVPVGSAESSLLTHRFPKANRLDELPSAAAMAAQLGEAGKAGWRFIDLMSDFHLLLFLTDFLGME-EVAVLCRSVREKETVPLGAGHVDLLRAIAGME 448
            ML+RVRSK GTWRV+ + P +TI  ++  I  +H ++    Q  +LD  G +   D QT++   + HGD++ L    +        G KI ADG++   TH + +  + FRPGM SLR MKM+WTL +F+ +DAQFE+KI AQK   P   K  ++    NDFQ Y+R+  F Q R G+LYG   TE KE  V+ +YEPPQE    GFE+LED  A+KV+A+A ALG  +VGW+F+HPPRE E F FS  E++ AA  QL+A  G K + F+T++V+L           K+G        A F+AFQVS QC+EM A GA+ E    P +  VN +FTA+VE KPA  VD NFFL  VPV   ESSL    FPK NR     + AA+ AQL +       +   +SDF LL+FL+DFL +E ++ V+C++VR+ + +PL +G+  L+ ++AG +
Sbjct:    1 MLVRVRSKNGTWRVDNLTPSSTIADIKRYIFEQHSIA-MQQQQLTLDQQGTQQTSDAQTLRDLRVGHGDMLFLDYDGDVVSTGGTIGTKINADGTLTRVTHHDTADKQAFRPGMKSLRDMKMYWTLGEFMRMDAQFEFKISAQKE--PQVAKVHLDGASCNDFQGYLRQFAFQQSRCGWLYGSVDTETKEVTVDFIYEPPQEGNPYGFEVLEDTNADKVDAVAEALGYEKVGWVFSHPPREDEDFHFSAREILLAA--QLQADAGGKGSMFLTLKVTL----------DKQGQ-------ASFEAFQVSDQCVEMFAVGALAENEKNPKSCAVNNTFTALVEAKPATEVDNNFFLCVVPVVPHESSLRCE-FPKLNREGSYRNRAALKAQLQKHRDEP--YAKRISDFQLLVFLSDFLDVETDIPVICQAVRDPK-IPLDSGYPILIDSVAGSQ 428          
BLAST of EWM21419.1 vs. NCBI_GenBank
Match: gi|970635261|gb|KUF80214.1| (NPL4 protein [Phytophthora nicotianae])

HSP 1 Score: 323.939 bits (829), Expect = 1.359e-103
Identity = 195/454 (42.95%), Postives = 276/454 (60.79%), Query Frame = 0
Query:    1 MLLRVRSKMGTWRVEGVEPGTTIKALRSRILSEHGVSPHPSQVFSLDPAGKRVMDDEQTVKSFNLQHGDLVHLAIREEDCAH--EAGKKIAADGSIVNKTHLEASRVKGFRPGMMSLRSMKMHWTLTDFVELDAQFEYKIKAQKNETPWCTKAIMEPICGNDFQSYMRRVGFNQCRMGYLYGQF-TEAKEAKVEVLYEPPQESTHEGFELLEDPRAEKVEALAAALGLVRVGWIFAHPPRE-EGFVFSGLEVMQAAMGQLEAADGVKETPFVTVRVSLAPVEKAGGEDGKEGGKEEVATVAHFDAFQVSLQCMEMVAEGAI-EPGPEPGAMLVNESFTAIVEGKPAPTVDVNFFLVNVPVGSAESSLLTHRFPKANRLDELPSAAAMAAQLGEAGKAGWRFIDLMSDFHLLLFLTDFLGME-EVAVLCRSVREKETVPLGAGHVDLLRAIAGME 448
            ML+RVRSK GTWRV  + P +TI  ++  I  +H ++P   Q+ +LD  G +   D QT++   + HGD++ L    E  +     G KI ADG++    + + +  + FRPGM SLR MKM+WTL +F+ +DAQFE+KI AQK   P   K  ++    NDFQ+Y+R+  F Q R G+LYG   +E KE  V+ +YEPPQE    GFE+L+DP A+KV+A+A ALG  +VGW+F+HPPRE E F FS  E++ AA  QL+A  G K + F+T++V+L           KEG        A F+AFQVS QC+EM A GA+ E    P A  V+++FTA+VE KPA  VD NFFL  VPV   ES L    FPK NR     + AA+  QL +       +   +SDF LL+FL+DFL ++ ++  +C++VR+  T PL +G+  L+ ++AG +
Sbjct:    1 MLIRVRSKNGTWRVGDLTPASTIADIKRWIFDQHSIAPAQQQL-ALDQQGAQQTTDAQTLRELRVGHGDMLFLDYDGETVSTGGTVGTKINADGTLTRVAYHDRADKQAFRPGMKSLRDMKMYWTLGEFMRMDAQFEFKISAQKE--PHVAKVHLDGASCNDFQAYLRQFAFQQSRCGWLYGSVDSETKEVTVDFIYEPPQEGNPYGFEVLDDPNADKVDAVAEALGYEKVGWVFSHPPREDEDFHFSAREILLAA--QLQADAGGKGSLFLTLKVTL----------DKEGQ-------ASFEAFQVSDQCVEMFAAGALMETEQNPKACAVSDTFTALVEAKPATEVDNNFFLCVVPVVPHESPLRCE-FPKLNREGAYRNRAALKTQLQKYRDE--XYAKRISDFQLLVFLSDFLDVQTDIPAICQAVRDPNT-PLDSGYPILIDSVAGSQ 428          
BLAST of EWM21419.1 vs. NCBI_GenBank
Match: gi|301103316|ref|XP_002900744.1| (NPL4-like protein [Phytophthora infestans T30-4] >gi|262101499|gb|EEY59551.1| NPL4-like protein [Phytophthora infestans T30-4])

HSP 1 Score: 323.168 bits (827), Expect = 2.572e-103
Identity = 192/454 (42.29%), Postives = 274/454 (60.35%), Query Frame = 0
Query:    1 MLLRVRSKMGTWRVEGVEPGTTIKALRSRILSEHGVSPHPSQVFSLDPAGKRVMDDEQTVKSFNLQHGDLVHLAIREEDCAHEA--GKKIAADGSIVNKTHLEASRVKGFRPGMMSLRSMKMHWTLTDFVELDAQFEYKIKAQKNETPWCTKAIMEPICGNDFQSYMRRVGFNQCRMGYLYGQF-TEAKEAKVEVLYEPPQESTHEGFELLEDPRAEKVEALAAALGLVRVGWIFAHPPRE-EGFVFSGLEVMQAAMGQLEAADGVKETPFVTVRVSLAPVEKAGGEDGKEGGKEEVATVAHFDAFQVSLQCMEMVAEGAI-EPGPEPGAMLVNESFTAIVEGKPAPTVDVNFFLVNVPVGSAESSLLTHRFPKANRLDELPSAAAMAAQLGEAGKAGWRFIDLMSDFHLLLFLTDFLGME-EVAVLCRSVREKETVPLGAGHVDLLRAIAGME 448
            ML+RVRSK GTWRV  + P +TI  ++  I  +H ++P   Q+ +LD  G +   D QT++   + HGD++ L    E  +     G KI ADG++ +  +   +  + FRPGM SLR MKM+WTL +F+ +DAQFE+KI AQK   P   K  ++    NDFQ+Y+R+  F Q R G+LYG   +E KE  V+ +YEPPQE    GFE+L+DP A+KV+A+A ALG  +VGW+F+HPPRE + F FS  E + AA  QL+A  G K + F+T++V+L           K+G        A F+AFQVS QC+EM A GA+ E    P A  V ++FTA+VE K A  VD NFFL  VPV   ES L    FPK NR     + AA+ +QL +       +   +SDF LL+FL+DFL ++ ++  +C++VR+  T PL +G+  L+ ++AG +
Sbjct:    1 MLIRVRSKNGTWRVGDLTPSSTIADIKRWIFEQHSIAPARQQL-ALDQQGAQQTTDTQTLRELRVGHGDMLFLDYDGETVSTGGVVGTKINADGTLTHVAYHGRADKQAFRPGMKSLRDMKMYWTLGEFMRMDAQFEFKISAQKE--PQVAKVHLDGASCNDFQAYLRQFAFQQSRCGWLYGSVDSETKEVTVDFIYEPPQEGNPYGFEVLDDPNADKVDAVAEALGYEKVGWVFSHPPREDDDFHFSARETLLAA--QLQADAGGKASLFLTLKVTL----------DKQGQ-------ASFEAFQVSDQCVEMFAAGALMENEHNPKACAVTDTFTALVEAKRATEVDNNFFLCVVPVVPHESPLRCE-FPKLNREGAYRNRAALKSQLQKYRNEP--YAKRISDFQLLVFLSDFLDVQTDIPAICQAVRDPNT-PLDSGYPILIDSVAGSQ 428          
BLAST of EWM21419.1 vs. NCBI_GenBank
Match: gi|675174069|ref|XP_008895919.1| (hypothetical protein PPTG_03888 [Phytophthora parasitica INRA-310] >gi|567950937|gb|ETK76644.1| hypothetical protein L915_16982 [Phytophthora parasitica] >gi|568009100|gb|ETL83312.1| hypothetical protein L917_16710 [Phytophthora parasitica] >gi|568039016|gb|ETM36529.1| hypothetical protein L914_16793 [Phytophthora parasitica] >gi|568103564|gb|ETN18221.1| hypothetical protein PPTG_03888 [Phytophthora parasitica INRA-310] >gi|570317191|gb|ETO65139.1| hypothetical protein F444_17494 [Phytophthora parasitica P1976] >gi|570940985|gb|ETP06242.1| hypothetical protein F441_17326 [Phytophthora parasitica CJ01A1] >gi|570971265|gb|ETP34384.1| hypothetical protein F442_17307 [Phytophthora parasitica P10297])

HSP 1 Score: 323.168 bits (827), Expect = 2.835e-103
Identity = 195/454 (42.95%), Postives = 276/454 (60.79%), Query Frame = 0
Query:    1 MLLRVRSKMGTWRVEGVEPGTTIKALRSRILSEHGVSPHPSQVFSLDPAGKRVMDDEQTVKSFNLQHGDLVHLAIREEDCAH--EAGKKIAADGSIVNKTHLEASRVKGFRPGMMSLRSMKMHWTLTDFVELDAQFEYKIKAQKNETPWCTKAIMEPICGNDFQSYMRRVGFNQCRMGYLYGQF-TEAKEAKVEVLYEPPQESTHEGFELLEDPRAEKVEALAAALGLVRVGWIFAHPPRE-EGFVFSGLEVMQAAMGQLEAADGVKETPFVTVRVSLAPVEKAGGEDGKEGGKEEVATVAHFDAFQVSLQCMEMVAEGAI-EPGPEPGAMLVNESFTAIVEGKPAPTVDVNFFLVNVPVGSAESSLLTHRFPKANRLDELPSAAAMAAQLGEAGKAGWRFIDLMSDFHLLLFLTDFLGME-EVAVLCRSVREKETVPLGAGHVDLLRAIAGME 448
            ML+RVRSK GTWRV  + P +TI  ++  I  +H ++P   Q+ +LD  G +   D QT++   + HGD++ L    E  +     G KI ADG++    + + +  + FRPGM SLR MKM+WTL +F+ +DAQFE+KI AQK   P   K  ++    NDFQ+Y+R+  F Q R G+LYG   +E KE  V+ +YEPPQE    GFE+L+DP A+KV+A+A ALG  +VGW+F+HPPRE E F FS  E++ AA  QL+A  G K + F+T++V+L           KEG        A F+AFQVS QC+EM A GA+ E    P A  V+++FTA+VE KPA  VD NFFL  VPV   ES L    FPK NR     + AA+  QL +       +   +SDF LL+FL+DFL ++ ++  +C++VR+  T PL +G+  L+ ++AG +
Sbjct:    1 MLIRVRSKNGTWRVGDLTPASTIADIKRWIFDQHSIAPAQQQL-ALDQQGAQQTTDAQTLRELRVGHGDMLFLDYDGETVSTGGTVGTKINADGTLTRVAYHDRADKQAFRPGMKSLRDMKMYWTLGEFMRMDAQFEFKISAQKE--PHVAKVHLDGASCNDFQAYLRQFAFQQSRCGWLYGSVDSETKEVTVDFIYEPPQEGNPYGFEVLDDPNADKVDAVAEALGYEKVGWVFSHPPREDEDFHFSAREILLAA--QLQADAGGKGSLFLTLKVTL----------DKEGQ-------ASFEAFQVSDQCVEMFAAGALMETEQNPKACAVSDTFTALVEAKPATEVDNNFFLCVVPVVPHESPLRCE-FPKLNREGAYRNRAALKTQLQKYRDEP--YAKRISDFQLLVFLSDFLDVQTDIPAICQAVRDPNT-PLDSGYPILIDSVAGSQ 428          
BLAST of EWM21419.1 vs. NCBI_GenBank
Match: gi|567979621|gb|ETL30097.1| (hypothetical protein L916_16881, partial [Phytophthora parasitica])

HSP 1 Score: 323.168 bits (827), Expect = 4.095e-103
Identity = 195/454 (42.95%), Postives = 276/454 (60.79%), Query Frame = 0
Query:    1 MLLRVRSKMGTWRVEGVEPGTTIKALRSRILSEHGVSPHPSQVFSLDPAGKRVMDDEQTVKSFNLQHGDLVHLAIREEDCAH--EAGKKIAADGSIVNKTHLEASRVKGFRPGMMSLRSMKMHWTLTDFVELDAQFEYKIKAQKNETPWCTKAIMEPICGNDFQSYMRRVGFNQCRMGYLYGQF-TEAKEAKVEVLYEPPQESTHEGFELLEDPRAEKVEALAAALGLVRVGWIFAHPPRE-EGFVFSGLEVMQAAMGQLEAADGVKETPFVTVRVSLAPVEKAGGEDGKEGGKEEVATVAHFDAFQVSLQCMEMVAEGAI-EPGPEPGAMLVNESFTAIVEGKPAPTVDVNFFLVNVPVGSAESSLLTHRFPKANRLDELPSAAAMAAQLGEAGKAGWRFIDLMSDFHLLLFLTDFLGME-EVAVLCRSVREKETVPLGAGHVDLLRAIAGME 448
            ML+RVRSK GTWRV  + P +TI  ++  I  +H ++P   Q+ +LD  G +   D QT++   + HGD++ L    E  +     G KI ADG++    + + +  + FRPGM SLR MKM+WTL +F+ +DAQFE+KI AQK   P   K  ++    NDFQ+Y+R+  F Q R G+LYG   +E KE  V+ +YEPPQE    GFE+L+DP A+KV+A+A ALG  +VGW+F+HPPRE E F FS  E++ AA  QL+A  G K + F+T++V+L           KEG        A F+AFQVS QC+EM A GA+ E    P A  V+++FTA+VE KPA  VD NFFL  VPV   ES L    FPK NR     + AA+  QL +       +   +SDF LL+FL+DFL ++ ++  +C++VR+  T PL +G+  L+ ++AG +
Sbjct:   15 MLIRVRSKNGTWRVGDLTPASTIADIKRWIFDQHSIAPAQQQL-ALDQQGAQQTTDAQTLRELRVGHGDMLFLDYDGETVSTGGTVGTKINADGTLTRVAYHDRADKQAFRPGMKSLRDMKMYWTLGEFMRMDAQFEFKISAQKE--PHVAKVHLDGASCNDFQAYLRQFAFQQSRCGWLYGSVDSETKEVTVDFIYEPPQEGNPYGFEVLDDPNADKVDAVAEALGYEKVGWVFSHPPREDEDFHFSAREILLAA--QLQADAGGKGSLFLTLKVTL----------DKEGQ-------ASFEAFQVSDQCVEMFAAGALMETEQNPKACAVSDTFTALVEAKPATEVDNNFFLCVVPVVPHESPLRCE-FPKLNREGAYRNRAALKTQLQKYRDEP--YAKRISDFQLLVFLSDFLDVQTDIPAICQAVRDPNT-PLDSGYPILIDSVAGSQ 442          
BLAST of EWM21419.1 vs. NCBI_GenBank
Match: gi|695397473|ref|XP_009521749.1| (hypothetical protein PHYSODRAFT_345180 [Phytophthora sojae] >gi|348686646|gb|EGZ26461.1| hypothetical protein PHYSODRAFT_345180 [Phytophthora sojae])

HSP 1 Score: 321.242 bits (822), Expect = 1.670e-102
Identity = 194/454 (42.73%), Postives = 274/454 (60.35%), Query Frame = 0
Query:    1 MLLRVRSKMGTWRVEGVEPGTTIKALRSRILSEHGVSPHPSQVFSLDPAGKRVMDDEQTVKSFNLQHGDLVHLAIREEDCAHEA--GKKIAADGSIVNKTHLEASRVKGFRPGMMSLRSMKMHWTLTDFVELDAQFEYKIKAQKNETPWCTKAIMEPICGNDFQSYMRRVGFNQCRMGYLYGQF-TEAKEAKVEVLYEPPQESTHEGFELLEDPRAEKVEALAAALGLVRVGWIFAHPPRE-EGFVFSGLEVMQAAMGQLEAADGVKETPFVTVRVSLAPVEKAGGEDGKEGGKEEVATVAHFDAFQVSLQCMEMVAEGAI-EPGPEPGAMLVNESFTAIVEGKPAPTVDVNFFLVNVPVGSAESSLLTHRFPKANRLDELPSAAAMAAQLGEAGKAGWRFIDLMSDFHLLLFLTDFLGME-EVAVLCRSVREKETVPLGAGHVDLLRAIAGME 448
            ML+RVRSK GTWRV  + P +TI  ++  I  +H ++P   Q+ +LD  G +   D QT++   + HGD++ L    E        G KI ADG++    + + +  + FRPGM SLR MKM+WTL +F+ +DAQFE+K+ AQK   P   K  ++    NDFQ+Y+R+  F Q R G+LYG    E KE  V+ +YEPPQE    GFE+L+DP A+KV+A+A ALG  +VGW+F+HPPRE + F FS  EV+ AA  QL+A  G K + F+T++V+L           KEG        A F+AFQVS QC+EM A GA+ E    P A  V+++FTA+VE KPA  VD NFFL  VPV   ES L +  FPK NR     S AA+ A L +       +   +SDF LL+FL+DFL +  ++  +C++VR+   +PL +G+  L+ ++AG +
Sbjct:    1 MLVRVRSKNGTWRVGDLTPSSTIADIKRWIFEQHSIAPAQQQL-ALDQQGAQTTSDTQTLRELRVGHGDMLFLDYDGETLGTGGVVGTKINADGTLTRVAYHDRADKQAFRPGMKSLRDMKMYWTLGEFMRMDAQFEFKVSAQKG--PQVAKVHLDGASCNDFQAYLRQFAFQQSRCGWLYGSVDAETKEVTVDFIYEPPQEGNPYGFEVLDDPNADKVDAVAEALGYEKVGWVFSHPPREDDDFHFSAREVLLAA--QLQADAGGKGSLFLTLKVTL----------DKEGQ-------ASFEAFQVSDQCVEMFAAGALAENEQNPQACAVSDTFTALVEAKPATEVDNNFFLCVVPVVPHESPLRSE-FPKLNREGSYRSRAALKAHLQKYRDEP--YAKRISDFQLLVFLSDFLDLRTDIPAICQAVRDP-NIPLDSGYPILIDSVAGSQ 428          
BLAST of EWM21419.1 vs. NCBI_GenBank
Match: gi|953503788|emb|CEG35354.1| (Nuclear pore complex, rNpl4 component (sc Npl4) [Plasmopara halstedii])

HSP 1 Score: 319.701 bits (818), Expect = 5.669e-102
Identity = 188/451 (41.69%), Postives = 269/451 (59.65%), Query Frame = 0
Query:    1 MLLRVRSKMGTWRVEGVEPGTTIKALRSRILSEHGVSPHPSQVFSLDPAGKRVMDDEQTVKSFNLQHGDLVHLAIREEDCAH--EAGKKIAADGSIVNKTHLEASRVKGFRPGMMSLRSMKMHWTLTDFVELDAQFEYKIKAQKNETPWCTKAIMEPICGNDFQSYMRRVGFNQCRMGYLYGQF-TEAKEAKVEVLYEPPQESTHEGFELLEDPRAEKVEALAAALGLVRVGWIFAHPPREEG-FVFSGLEVMQAAMGQLEAADGVKETPFVTVRVSLAPVEKAGGEDGKEGGKEEVATVAHFDAFQVSLQCMEMVAEGAI-EPGPEPGAMLVNESFTAIVEGKPAPTVDVNFFLVNVPVGSAESSLLTHRFPKANRLDELPSAAAMAAQLGEAGKAGWRFIDLMSDFHLLLFLTDFLGM-EEVAVLCRSVREKETVPLGAGHVDLLRAIA 445
            M++RVRSK G WR+E + P +TI  ++  I  +H ++P   Q  +LD        D QT+++  L HGD++ L    +  A     G KI ADG++    + + +  + FRPGM SLR MKMHW+L +F+ +DAQFE+K+ AQK   P  TK  ++    NDFQ+Y+R+  F Q R G+LYG   +E KE  V+ +YEPPQE    GFE+L+D  AEKV+A++ ALG  +VGWIF+HPPRE+  F FS  E++ AA  QL+A  G K + F+T++V+L           K+G        A F+AFQVS QC+EM A GA+ E    P A  +N++FTA+VE KPA  VD NFFL  VPV    +S L   FPK NR     + AA+  QL +       F+  +SDF LL+FL DFL +  ++  +C ++R+   V L +G+  L+ ++A
Sbjct:    1 MIIRVRSKNGIWRIENLTPSSTIADIKLWIFEQHSIAP-THQRLTLDQQATMQTADTQTLRTLQLGHGDMLFLDYEGQAVATGGTIGTKINADGTLTRVEYHDRADKQAFRPGMKSLRDMKMHWSLGEFMRMDAQFEFKLTAQKE--PEVTKVHLDGASCNDFQAYLRQFAFQQSRCGWLYGSVNSETKEVTVDFIYEPPQEGNPYGFEVLDDLNAEKVDAISEALGCEKVGWIFSHPPREDSDFHFSVREILLAA--QLQADAGGKSSLFLTLKVTL----------DKQGQ-------ASFEAFQVSNQCVEMFAAGALMENDHNPKACAINDTFTALVEAKPATEVDNNFFLCVVPV-VPHASPLRCEFPKINREGVYQTRAALKYQLQKYSSEP--FVKRISDFQLLVFLADFLDIATDIPAICLAIRDL-NVSLDSGYQILIDSVA 425          
The following BLAST results are available for this feature:
BLAST of EWM21419.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585101647|gb|EWM21419.1|0.000e+0100.00Nuclear pore localization protein Npl4, ubiquitin-... [more]
gi|553190922|ref|XP_005855292.1|0.000e+099.78nuclear protein localization 4-like protein [Nanno... [more]
gi|299117192|emb|CBN75156.1|2.566e-13749.35conserved unknown protein [Ectocarpus siliculosus][more]
gi|1214671193|gb|OWY95293.1|1.662e-10543.61NPL4-like protein [Phytophthora megakarya][more]
gi|970635261|gb|KUF80214.1|1.359e-10342.95NPL4 protein [Phytophthora nicotianae][more]
gi|301103316|ref|XP_002900744.1|2.572e-10342.29NPL4-like protein [Phytophthora infestans T30-4] >... [more]
gi|675174069|ref|XP_008895919.1|2.835e-10342.95hypothetical protein PPTG_03888 [Phytophthora para... [more]
gi|567979621|gb|ETL30097.1|4.095e-10342.95hypothetical protein L916_16881, partial [Phytopht... [more]
gi|695397473|ref|XP_009521749.1|1.670e-10242.73hypothetical protein PHYSODRAFT_345180 [Phytophtho... [more]
gi|953503788|emb|CEG35354.1|5.669e-10241.69Nuclear pore complex, rNpl4 component (sc Npl4) [P... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9290rna9290Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications