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Properties
| Property Name | Value |
|---|
| Product | cytohesin 1 |
| Orig transcript id | gnl|cribi|Naga_100022g43.869.mrna |
| Orig protein id | gnl|cribi|Naga_100022g43.869 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002456.1 | supercontig | CM002456.1:748853..752018 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna929 ID=rna929|Name=rna929|organism=Nannochloropsis gaditana|type=mRNA|length=471bp
ATGCGGGACACTCCGGAAAAGAGAAAGGATTACAAGCATTACTGGTACGC
ACCCGTATATACCGGTCTTGCTGGTTCAGCTGTAGGAGCAGCAGTCGGGG
CATGGCGCGGCCAATCAGCTTTATTATTTTCACTACATTTGGGAATCGGC
TACACCATATTCGGGGCATCATTTAGCTCTTCACTTTATGGCTTGGAGTA
CGTACGACAAGAGGAAGGCATACTAAACTGGGTGGGCGCCGGTGCTGTCG
CAGGGGCTGTGACCTCTCTCATCACTGCTGGGCCTCGCCAAGCAGGCCGA
GGAGCCGTTTTCTTCGGTGGAATGGGCATGATTGCAGAAAGTATTTCCGA
TTTGGTGGAGAGCTCAATCTCAAATTACAAGGATAGGAGGGCCAAGCAAC
GCTTCGGACACCCCACTGCCCCATCTGCATGGGGAGGGGACAAGGCGATA
GGAAGGGCAGAGAAGCGATGA back to topprotein sequence of rna929 >rna929-protein ID=rna929-protein|Name=rna929|organism=Nannochloropsis gaditana|type=polypeptide|length=642bp
MEESQKYDEEVARLRDTNHNIIGEEEIQDHLQCEVQKIPSAKSASAQEAS
HHDPKPKHISGLSLGKYAATTPVGPSRGPSRRISLRTLAPLMRLRSQDIK
KHPWIVALNSTRVKEKRLIEQGIAKFNEKAAAGIDFLIENGVLQRAPADV
AVWLNQQALELSKKRLGEYLGGNDSFAQEVLHQLLQDYDFQGMSIDEAMR
VFINDIRMPGEAQMLDRILNAFAKRFFETTRNENQYATEDTVYILSFSIM
LLNTDLHNRNLPRKEKMRLEDFIRNNRGINAGRDLPPELLSTLYYSIKRK
ELRMKEGDMWESESLTFVAPRMSGWLEKQLQGQLGFCRFHRFWFVLTNGC
LFYFSSPVDRNPRCIIILEAVMAIKGASSTEIILYSNGGGIIKSVKIGKR
DKATTRGQHTHFIFRTGSQKERDEWVEAFQTETEPFQRHHRLGGCGIPGA
SQGKCTSPEVASAGSDPSVQGIAKFLSQYRSPRSVGGVRPVAEVPHAHTS
CLAEGWMRRRSYGSRGWQRRYFMLIAVGKTKHRPEHSELHWYTTLEMAQS
HIGIRGCQGSISLDDPYLVFCVTTAIHSPSYRLPEPAATVFEFETMLHGS
KVKELISPEDQESLSLWLNALQPLVPVRNGEHRQRDTAIPDS back to topmRNA from alignment at CM002456.1:748853..752018- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna929 ID=rna929|Name=rna929|organism=Nannochloropsis gaditana|type=mRNA|length=3166bp|location=Sequence derived from alignment at CM002456.1:748853..752018- (Nannochloropsis gaditana)
ACAGAATAACAGGCGTCCATGCCCCTAAAGGCGTGCTCCAAGCCTGTGAC
AGTACTCGTTTGAGTAACACAGTGCCAAGACAAGGCCTAAGCCTAACAGC
AAAGTAGATGCTTATGAAAGATCGTCAAGAAGCATTATGAGCTGGATACT
TGCGCACCCCGAAGTATAAGGTATCGCTGCTTGAGATTGCACTTTGCCTC
CGGAGGCTTGCAAGGGCACTTTCTCCAAGCAACGGCACTTCCTCCAAGCA
AATTACAGAAGACAGCATGGAGGAAAGCCAGAAATATGACGAGGAGGTCG
CGCGACTTCGGGACACTAATCACAATATTATTGGTGAAGAGGAGATTCAA
GACCATCTACAATGTGAAGTGCAGAAAATTCCATCGGCCAAGTCTGCATC
TGCTCAAGAGGCTTCTCATCATGACCCCAAGCCTAAGCACATTTCAGGGC
TGTCATTAGGCAAGTATGCTGCTACAACTCCGGTGGGACCGTCCAGGGGG
CCGTCAAGACGCATAAGCTTGCGTACATTAGCGCCGCTAATGCGACTCCG
AAGTCAAGATATCAAAAAGCATCCTTGGATTGTTGCACTCAACAGCACGC
GTGTAAAAGAGAAGAGGTTGATAGAACAAGGTATCGCTAAATTCAATGAG
AAAGCTGCCGCTGGTATTGACTTTCTCATTGAAAATGGAGTACTCCAGAG
AGCTCCAGCAGACGTTGCCGTGTGGCTGAACCAGCAAGCATTGGAATTGA
GTAAAAAGCGTCTAGGGGAGTATCTGGGAGGTAACGATTCTTTTGCGCAG
GAGGTTTTGCATCAACTCCTACAGGACTATGACTTTCAAGGGATGTCCAT
CGATGAAGCTATGCGGGTAAGATTAGAGGGAGGAAAAACCCTTTTTTGAT
TTGTTATCTTCAATTTTATCTTCTCGCGAATGGAAGTTTCATGTCTTCAG
CATATTCAAGCCAAGCTTGGAGGACGGAGGGCGGCGAGATATATATCTCC
ACAGACAGGCTCTTATGGCTTTCCTCGAATGATTAAAATAAAAGACCTCA
ATGCTCACTTTCCTTCATATTCATCTCGCGTGCAGGTGTTTATCAATGAT
ATTCGCATGCCAGGCGAGGCCCAGATGCTGGATCGAATCCTAAATGCTTT
TGCGAAGCGCTTTTTTGAGACCACTCGAAATGAGAACCAATACGCAACAG
AGGATACTGTATATATCCTCTCCTTTTCCATCATGCTTCTCAACACGGAT
CTTCATAACCGGAATCTTCCCCGAAAGGAAAAAATGCGCCTTGAGGACTT
TATCCGAAACAACCGCGGTATTAATGCCGGACGAGACCTGCCACCTGAGC
TTCTTTCAACGTTATACTACTCGATCAAACGCAAAGAATTGCGGATGAAG
GAAGGAGATATGTGGGAGTCAGAATCCCTTACCTTTGTGGCGCCACGAAT
GAGCGGCTGGCTTGAAAAACAGCTTCAGGGTCAGCTTGGGTTTTGCCGTT
TTCACAGATTTTGGTTCGTCTTGACGAATGGGTGTCTCTTTTATTTTTCA
AGCCCCGTGGATAGAAATCCGCGCTGCATCATTATTCTGGAGGCTGTCAT
GGTAAGTCTCGTATACATTTTATCAGGGCATAGTAGTGCTAAGTGAGACG
GCGGTTTTAAGGCTGGTGCGTTATTAAGTGGATTGTCCCATTGATGCCCG
ACGTTTATCTCCAAGAGACATTTCGTCTTAATTGTACTCGCGTTCTCCTT
GCCATATTTTTTCTGATCCTCTTTTGGAAAGTCAATTCCGAATTGTTTAT
GACTTCCATTTTTCGCGTCAATTTGCAAGGCGATAAAGGGCGCGTCTTCC
ACGGAGATCATCCTCTACAGCAATGGGGGGGGGATAATCAAAAGCGTGAA
GATCGGCAAGCGAGACAAAGCCACGACCCGGGGCCAGCACACACATTTTA
TTTTCCGAACAGGCTCACAAAAGGAGCGCGACGAATGGGTGGAGGCATTT
CAAACCGAGACGGAACCTTTCCAGCGCCATCATCGCCTTGGGGGCTGTGG
CATTCCAGGCGCCAGCCAGGGAAAATGTACTAGCCCTGAGGTAGCAAGTG
CTGGGAGTGATCCAAGTGTGCAAGGTATCGCAAAATTCTTAAGTCAGTAT
CGTAGCCCACGCTCGGTAGGAGGTGTACGTCCGGTCGCTGAAGTCCCACA
CGCGCACACGTCATGTCTAGCCGAAGGTTGGATGCGGCGCAGGTCTTACG
GAAGCCGAGGCTGGCAGCGACGGTATTTTATGCTGATCGCAGTGGGTAAA
ACAAAGCATCGGCCTGAACATTCTGAGCTTCATTGGTATACGACATTGGA
AATGGCCCAATCTCACATTGGCATTCGAGGCTGCCAAGGCAGCATATCGC
TCGATGACCCCTATCTAGTCTTTTGCGTCACTACTGCTATCCACAGTCCA
TCCTACCGGCTTCCGGAGCCCGCGGCTACTGTCTTTGAGTTTGAGACCAT
GCTACATGGTAGCAAGGTGAAAGAATTGATTTCACCCGAGGATCAGGAAA
GCCTCAGTTTGTGGTTGAACGCGCTTCAGCCACTTGTGCCGGTTCGCAAT
GGCGAGCACAGGCAGCGAGACACGGCCATCCCCGATTCATAAGTAGCTTA
GACCGTCAACTAAACACTGTCCACTTCAATTAAACTCGCTGACGCTATGT
GCATTTGAAATTAGAATTGTCTTCTTGCACCTATGGAATTAGCTGCATAG
TGCGCTTGATAAGTATGGACTGTTAATGTCGAAGCCCATGCAGAAATAGA
TAAAGGTCGTGGTTCTGAGATGATGTGCAATGTAGAGGGGAACCACGCAC
GGAAAAGAGAGAGGTCTTCATTCCGCACAAAATTTTCAAACATACATCCA
CGCAAACATTTACGCGTCCTTCCAGTTTAAAAGTAAGAAGGAGTGCGCCC
CAAACACCAATTTTCCGAGAGATTCCAGGCAATTTAGTTATGTGTATGGA
AATGAATCCAAAACCGGTGTGTTTTCATGCCCTTTGCAGCAAAGTGTAGC
TCTTCAGCGCACTGTGAGTACGTGTTGAGATGTTATCTCCCTTCTTTACA
GAAAAGTGTCGGAGCTGACTGCGAAAAAGGAAGCAAAGGTGAACTTAAAA
AATCTTTGTTGCCATG back to topCoding sequence (CDS) from alignment at CM002456.1:748853..752018- >rna929 ID=rna929|Name=rna929|organism=Nannochloropsis gaditana|type=CDS|length=5787bp|location=Sequence derived from alignment at CM002456.1:748853..752018- (Nannochloropsis gaditana)
GCGATAAAGGGCGCGTCTTCCACGGAGATCATCCTCTACAGCAATGGGGG
GGGGATAATCAAAAGCGTGAAGATCGGCAAGCGAGACAAAGCCACGACCC
GGGGCCAGCACACACATTTTATTTTCCGAACAGGCTCACAAAAGGAGCGC
GACGAATGGGTGGAGGCATTTCAAACCGAGACGGAACCTTTCCAGCGCCA
TCATCGCCTTGGGGGCTGTGGCATTCCAGGCGCCAGCCAGGGAAAATGTA
CTAGCCCTGAGGTAGCAAGTGCTGGGAGTGATCCAAGTGTGCAAGGTATC
GCAAAATTCTTAAGTCAGTATCGTAGCCCACGCTCGGTAGGAGGTGTACG
TCCGGTCGCTGAAGTCCCACACGCGCACACGTCATGTCTAGCCGAAGGTT
GGATGCGGCGCAGGTCTTACGGAAGCCGAGGCTGGCAGCGACGGTATTTT
ATGCTGATCGCAGTGGGTAAAACAAAGCATCGGCCTGAACATTCTGAGCT
TCATTGGTATACGACATTGGAAATGGCCCAATCTCACATTGGCATTCGAG
GCTGCCAAGGCAGCATATCGCTCGATGACCCCTATCTAGTCTTTTGCGTC
ACTACTGCTATCCACAGTCCATCCTACCGGCTTCCGGAGCCCGCGGCTAC
TGTCTTTGAGTTTGAGACCATGCTACATGGTAGCAAGGTGAAAGAATTGA
TTTCACCCGAGGATCAGGAAAGCCTCAGTTTGTGGTTGAACGCGCTTCAG
CCACTTGTGCCGGTTCGCAATGGCGAGCACAGGCAGCGAGACACGGCCAT
CCCCGATTCATAAGTGTTTATCAATGATATTCGCATGCCAGGCGAGGCCC
AGATGCTGGATCGAATCCTAAATGCTTTTGCGAAGCGCTTTTTTGAGACC
ACTCGAAATGAGAACCAATACGCAACAGAGGATACTGTATATATCCTCTC
CTTTTCCATCATGCTTCTCAACACGGATCTTCATAACCGGAATCTTCCCC
GAAAGGAAAAAATGCGCCTTGAGGACTTTATCCGAAACAACCGCGGTATT
AATGCCGGACGAGACCTGCCACCTGAGCTTCTTTCAACGTTATACTACTC
GATCAAACGCAAAGAATTGCGGATGAAGGAAGGAGATATGTGGGAGTCAG
AATCCCTTACCTTTGTGGCGCCACGAATGAGCGGCTGGCTTGAAAAACAG
CTTCAGGGTCAGCTTGGGTTTTGCCGTTTTCACAGATTTTGGTTCGTCTT
GACGAATGGGTGTCTCTTTTATTTTTCAAGCCCCGTGGATAGAAATCCGC
GCTGCATCATTATTCTGGAGGCTGTCATGATGGAGGAAAGCCAGAAATAT
GACGAGGAGGTCGCGCGACTTCGGGACACTAATCACAATATTATTGGTGA
AGAGGAGATTCAAGACCATCTACAATGTGAAGTGCAGAAAATTCCATCGG
CCAAGTCTGCATCTGCTCAAGAGGCTTCTCATCATGACCCCAAGCCTAAG
CACATTTCAGGGCTGTCATTAGGCAAGTATGCTGCTACAACTCCGGTGGG
ACCGTCCAGGGGGCCGTCAAGACGCATAAGCTTGCGTACATTAGCGCCGC
TAATGCGACTCCGAAGTCAAGATATCAAAAAGCATCCTTGGATTGTTGCA
CTCAACAGCACGCGTGTAAAAGAGAAGAGGTTGATAGAACAAGGTATCGC
TAAATTCAATGAGAAAGCTGCCGCTGGTATTGACTTTCTCATTGAAAATG
GAGTACTCCAGAGAGCTCCAGCAGACGTTGCCGTGTGGCTGAACCAGCAA
GCATTGGAATTGAGTAAAAAGCGTCTAGGGGAGTATCTGGGAGGTAACGA
TTCTTTTGCGCAGGAGGTTTTGCATCAACTCCTACAGGACTATGACTTTC
AAGGGATGTCCATCGATGAAGCTATGCGGGCGATAAAGGGCGCGTCTTCC
ACGGAGATCATCCTCTACAGCAATGGGGGGGGGATAATCAAAAGCGTGAA
GATCGGCAAGCGAGACAAAGCCACGACCCGGGGCCAGCACACACATTTTA
TTTTCCGAACAGGCTCACAAAAGGAGCGCGACGAATGGGTGGAGGCATTT
CAAACCGAGACGGAACCTTTCCAGCGCCATCATCGCCTTGGGGGCTGTGG
CATTCCAGGCGCCAGCCAGGGAAAATGTACTAGCCCTGAGGTAGCAAGTG
CTGGGAGTGATCCAAGTGTGCAAGGTATCGCAAAATTCTTAAGTCAGTAT
CGTAGCCCACGCTCGGTAGGAGGTGTACGTCCGGTCGCTGAAGTCCCACA
CGCGCACACGTCATGTCTAGCCGAAGGTTGGATGCGGCGCAGGTCTTACG
GAAGCCGAGGCTGGCAGCGACGGTATTTTATGCTGATCGCAGTGGGTAAA
ACAAAGCATCGGCCTGAACATTCTGAGCTTCATTGGTATACGACATTGGA
AATGGCCCAATCTCACATTGGCATTCGAGGCTGCCAAGGCAGCATATCGC
TCGATGACCCCTATCTAGTCTTTTGCGTCACTACTGCTATCCACAGTCCA
TCCTACCGGCTTCCGGAGCCCGCGGCTACTGTCTTTGAGTTTGAGACCAT
GCTACATGGTAGCAAGGTGAAAGAATTGATTTCACCCGAGGATCAGGAAA
GCCTCAGTTTGTGGTTGAACGCGCTTCAGCCACTTGTGCCGGTTCGCAAT
GGCGAGCACAGGCAGCGAGACACGGCCATCCCCGATTCATAAGTGTTTAT
CAATGATATTCGCATGCCAGGCGAGGCCCAGATGCTGGATCGAATCCTAA
ATGCTTTTGCGAAGCGCTTTTTTGAGACCACTCGAAATGAGAACCAATAC
GCAACAGAGGATACTGTATATATCCTCTCCTTTTCCATCATGCTTCTCAA
CACGGATCTTCATAACCGGAATCTTCCCCGAAAGGAAAAAATGCGCCTTG
AGGACTTTATCCGAAACAACCGCGGTATTAATGCCGGACGAGACCTGCCA
CCTGAGCTTCTTTCAACGTTATACTACTCGATCAAACGCAAAGAATTGCG
GATGAAGGAAGGAGATATGTGGGAGTCAGAATCCCTTACCTTTGTGGCGC
CACGAATGAGCGGCTGGCTTGAAAAACAGCTTCAGGGTCAGCTTGGGTTT
TGCCGTTTTCACAGATTTTGGTTCGTCTTGACGAATGGGTGTCTCTTTTA
TTTTTCAAGCCCCGTGGATAGAAATCCGCGCTGCATCATTATTCTGGAGG
CTGTCATGATGGAGGAAAGCCAGAAATATGACGAGGAGGTCGCGCGACTT
CGGGACACTAATCACAATATTATTGGTGAAGAGGAGATTCAAGACCATCT
ACAATGTGAAGTGCAGAAAATTCCATCGGCCAAGTCTGCATCTGCTCAAG
AGGCTTCTCATCATGACCCCAAGCCTAAGCACATTTCAGGGCTGTCATTA
GGCAAGTATGCTGCTACAACTCCGGTGGGACCGTCCAGGGGGCCGTCAAG
ACGCATAAGCTTGCGTACATTAGCGCCGCTAATGCGACTCCGAAGTCAAG
ATATCAAAAAGCATCCTTGGATTGTTGCACTCAACAGCACGCGTGTAAAA
GAGAAGAGGTTGATAGAACAAGGTATCGCTAAATTCAATGAGAAAGCTGC
CGCTGGTATTGACTTTCTCATTGAAAATGGAGTACTCCAGAGAGCTCCAG
CAGACGTTGCCGTGTGGCTGAACCAGCAAGCATTGGAATTGAGTAAAAAG
CGTCTAGGGGAGTATCTGGGAGGTAACGATTCTTTTGCGCAGGAGGTTTT
GCATCAACTCCTACAGGACTATGACTTTCAAGGGATGTCCATCGATGAAG
CTATGCGGGCGATAAAGGGCGCGTCTTCCACGGAGATCATCCTCTACAGC
AATGGGGGGGGGATAATCAAAAGCGTGAAGATCGGCAAGCGAGACAAAGC
CACGACCCGGGGCCAGCACACACATTTTATTTTCCGAACAGGCTCACAAA
AGGAGCGCGACGAATGGGTGGAGGCATTTCAAACCGAGACGGAACCTTTC
CAGCGCCATCATCGCCTTGGGGGCTGTGGCATTCCAGGCGCCAGCCAGGG
AAAATGTACTAGCCCTGAGGTAGCAAGTGCTGGGAGTGATCCAAGTGTGC
AAGGTATCGCAAAATTCTTAAGTCAGTATCGTAGCCCACGCTCGGTAGGA
GGTGTACGTCCGGTCGCTGAAGTCCCACACGCGCACACGTCATGTCTAGC
CGAAGGTTGGATGCGGCGCAGGTCTTACGGAAGCCGAGGCTGGCAGCGAC
GGTATTTTATGCTGATCGCAGTGGGTAAAACAAAGCATCGGCCTGAACAT
TCTGAGCTTCATTGGTATACGACATTGGAAATGGCCCAATCTCACATTGG
CATTCGAGGCTGCCAAGGCAGCATATCGCTCGATGACCCCTATCTAGTCT
TTTGCGTCACTACTGCTATCCACAGTCCATCCTACCGGCTTCCGGAGCCC
GCGGCTACTGTCTTTGAGTTTGAGACCATGCTACATGGTAGCAAGGTGAA
AGAATTGATTTCACCCGAGGATCAGGAAAGCCTCAGTTTGTGGTTGAACG
CGCTTCAGCCACTTGTGCCGGTTCGCAATGGCGAGCACAGGCAGCGAGAC
ACGGCCATCCCCGATTCATAAGTGTTTATCAATGATATTCGCATGCCAGG
CGAGGCCCAGATGCTGGATCGAATCCTAAATGCTTTTGCGAAGCGCTTTT
TTGAGACCACTCGAAATGAGAACCAATACGCAACAGAGGATACTGTATAT
ATCCTCTCCTTTTCCATCATGCTTCTCAACACGGATCTTCATAACCGGAA
TCTTCCCCGAAAGGAAAAAATGCGCCTTGAGGACTTTATCCGAAACAACC
GCGGTATTAATGCCGGACGAGACCTGCCACCTGAGCTTCTTTCAACGTTA
TACTACTCGATCAAACGCAAAGAATTGCGGATGAAGGAAGGAGATATGTG
GGAGTCAGAATCCCTTACCTTTGTGGCGCCACGAATGAGCGGCTGGCTTG
AAAAACAGCTTCAGGGTCAGCTTGGGTTTTGCCGTTTTCACAGATTTTGG
TTCGTCTTGACGAATGGGTGTCTCTTTTATTTTTCAAGCCCCGTGGATAG
AAATCCGCGCTGCATCATTATTCTGGAGGCTGTCATGATGGAGGAAAGCC
AGAAATATGACGAGGAGGTCGCGCGACTTCGGGACACTAATCACAATATT
ATTGGTGAAGAGGAGATTCAAGACCATCTACAATGTGAAGTGCAGAAAAT
TCCATCGGCCAAGTCTGCATCTGCTCAAGAGGCTTCTCATCATGACCCCA
AGCCTAAGCACATTTCAGGGCTGTCATTAGGCAAGTATGCTGCTACAACT
CCGGTGGGACCGTCCAGGGGGCCGTCAAGACGCATAAGCTTGCGTACATT
AGCGCCGCTAATGCGACTCCGAAGTCAAGATATCAAAAAGCATCCTTGGA
TTGTTGCACTCAACAGCACGCGTGTAAAAGAGAAGAGGTTGATAGAACAA
GGTATCGCTAAATTCAATGAGAAAGCTGCCGCTGGTATTGACTTTCTCAT
TGAAAATGGAGTACTCCAGAGAGCTCCAGCAGACGTTGCCGTGTGGCTGA
ACCAGCAAGCATTGGAATTGAGTAAAAAGCGTCTAGGGGAGTATCTGGGA
GGTAACGATTCTTTTGCGCAGGAGGTTTTGCATCAACTCCTACAGGACTA
TGACTTTCAAGGGATGTCCATCGATGAAGCTATGCGG back to top
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