EWM29770.1, cds929 (CDS) Nannochloropsis gaditana

Overview
NameEWM29770.1
Unique Namecds929
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002456.1:751153..751752 -
Alignment locationCM002456.1:750418..750933 -
Alignment locationCM002456.1:749377..750189 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM29770.1
Productcytohesin 1
Orig transcript idgnl|cribi|Naga_100022g43.869.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002456.1supercontigCM002456.1:751153..751752 -
CM002456.1supercontigCM002456.1:750418..750933 -
CM002456.1supercontigCM002456.1:749377..750189 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0007165signal transduction
GO:0032012regulation of ARF protein signal transduction
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0005086ARF guanyl-nucleotide exchange factor activity
Vocabulary: INTERPRO
TermDefinition
IPR023394Sec7_alpha_orthog
IPR011993PH-like_dom
IPR001849PH_domain
IPR000904Sec7_dom
Homology
BLAST of EWM29770.1 vs. NCBI_GenBank
Match: gi|585112350|gb|EWM29770.1| (cytohesin 1 [Nannochloropsis gaditana])

HSP 1 Score: 1341.64 bits (3471), Expect = 0.000e+0
Identity = 642/642 (100.00%), Postives = 642/642 (100.00%), Query Frame = 0
Query:    1 MEESQKYDEEVARLRDTNHNIIGEEEIQDHLQCEVQKIPSAKSASAQEASHHDPKPKHISGLSLGKYAATTPVGPSRGPSRRISLRTLAPLMRLRSQDIKKHPWIVALNSTRVKEKRLIEQGIAKFNEKAAAGIDFLIENGVLQRAPADVAVWLNQQALELSKKRLGEYLGGNDSFAQEVLHQLLQDYDFQGMSIDEAMRVFINDIRMPGEAQMLDRILNAFAKRFFETTRNENQYATEDTVYILSFSIMLLNTDLHNRNLPRKEKMRLEDFIRNNRGINAGRDLPPELLSTLYYSIKRKELRMKEGDMWESESLTFVAPRMSGWLEKQLQGQLGFCRFHRFWFVLTNGCLFYFSSPVDRNPRCIIILEAVMAIKGASSTEIILYSNGGGIIKSVKIGKRDKATTRGQHTHFIFRTGSQKERDEWVEAFQTETEPFQRHHRLGGCGIPGASQGKCTSPEVASAGSDPSVQGIAKFLSQYRSPRSVGGVRPVAEVPHAHTSCLAEGWMRRRSYGSRGWQRRYFMLIAVGKTKHRPEHSELHWYTTLEMAQSHIGIRGCQGSISLDDPYLVFCVTTAIHSPSYRLPEPAATVFEFETMLHGSKVKELISPEDQESLSLWLNALQPLVPVRNGEHRQRDTAIPDS 642
            MEESQKYDEEVARLRDTNHNIIGEEEIQDHLQCEVQKIPSAKSASAQEASHHDPKPKHISGLSLGKYAATTPVGPSRGPSRRISLRTLAPLMRLRSQDIKKHPWIVALNSTRVKEKRLIEQGIAKFNEKAAAGIDFLIENGVLQRAPADVAVWLNQQALELSKKRLGEYLGGNDSFAQEVLHQLLQDYDFQGMSIDEAMRVFINDIRMPGEAQMLDRILNAFAKRFFETTRNENQYATEDTVYILSFSIMLLNTDLHNRNLPRKEKMRLEDFIRNNRGINAGRDLPPELLSTLYYSIKRKELRMKEGDMWESESLTFVAPRMSGWLEKQLQGQLGFCRFHRFWFVLTNGCLFYFSSPVDRNPRCIIILEAVMAIKGASSTEIILYSNGGGIIKSVKIGKRDKATTRGQHTHFIFRTGSQKERDEWVEAFQTETEPFQRHHRLGGCGIPGASQGKCTSPEVASAGSDPSVQGIAKFLSQYRSPRSVGGVRPVAEVPHAHTSCLAEGWMRRRSYGSRGWQRRYFMLIAVGKTKHRPEHSELHWYTTLEMAQSHIGIRGCQGSISLDDPYLVFCVTTAIHSPSYRLPEPAATVFEFETMLHGSKVKELISPEDQESLSLWLNALQPLVPVRNGEHRQRDTAIPDS
Sbjct:    1 MEESQKYDEEVARLRDTNHNIIGEEEIQDHLQCEVQKIPSAKSASAQEASHHDPKPKHISGLSLGKYAATTPVGPSRGPSRRISLRTLAPLMRLRSQDIKKHPWIVALNSTRVKEKRLIEQGIAKFNEKAAAGIDFLIENGVLQRAPADVAVWLNQQALELSKKRLGEYLGGNDSFAQEVLHQLLQDYDFQGMSIDEAMRVFINDIRMPGEAQMLDRILNAFAKRFFETTRNENQYATEDTVYILSFSIMLLNTDLHNRNLPRKEKMRLEDFIRNNRGINAGRDLPPELLSTLYYSIKRKELRMKEGDMWESESLTFVAPRMSGWLEKQLQGQLGFCRFHRFWFVLTNGCLFYFSSPVDRNPRCIIILEAVMAIKGASSTEIILYSNGGGIIKSVKIGKRDKATTRGQHTHFIFRTGSQKERDEWVEAFQTETEPFQRHHRLGGCGIPGASQGKCTSPEVASAGSDPSVQGIAKFLSQYRSPRSVGGVRPVAEVPHAHTSCLAEGWMRRRSYGSRGWQRRYFMLIAVGKTKHRPEHSELHWYTTLEMAQSHIGIRGCQGSISLDDPYLVFCVTTAIHSPSYRLPEPAATVFEFETMLHGSKVKELISPEDQESLSLWLNALQPLVPVRNGEHRQRDTAIPDS 642          
BLAST of EWM29770.1 vs. NCBI_GenBank
Match: gi|299116099|emb|CBN74515.1| (pleckstrin homology (PH) domain-containing protein [Ectocarpus siliculosus])

HSP 1 Score: 270.011 bits (689), Expect = 5.978e-75
Identity = 179/497 (36.02%), Postives = 271/497 (54.53%), Query Frame = 0
Query:   81 RRISLRTLAPLMRLRSQDIKKHPWIVALNSTRVKEKRLIEQGIAKFNEKAAAGIDFLIENGVLQRAPADVAVWLNQQALELSKKRLGEYLGGNDSFAQEVLHQLLQDYDFQGMSIDEAMRVFINDIRMPGEAQMLDRILNAFAKRFFETTRNENQYATEDTVYILSFSIMLLNTDLHNRNLPRKEKMRLEDFIRNNRGINAGRDLPPELLSTLYYSIKRKELRMKEGDMWESESLTFVAPRMSGWLEKQLQGQLGFCRFHRFWFVLTNGCLFYFSSP--VDRNPRCIIILEAV-MAIKGASSTEIILYSNGGGIIKSVKIGKRDKATT-RGQHTHFIFRTGSQKERDEWVEAFQTETEPFQRHHRLGGCGIPGASQGKCTSPEVASAGS---DPSVQG--IAKFLSQYRSPRSVGGVRPVAEVPHAHTSCLAEGWMRRRSYGSRGWQRRYFMLI-AVGKTKHRPEHSELHWYTTLEMAQSHIG--IRGCQGSISLDD 565
            R  S R   P+   RSQ +     + ++NS R    +++E+G+ KFN     GI +LI+NG++  +   +  +L   A  LSK+RLGEY G ++  AQEVL   L++  F+  S+DEA+R  +   R+PGEAQ +DRI+ +FA R+ E   N   ++  DT ++L+F +M+LNTD++NRN+   +KM   +F++N+RGI+ G+D   ELL  +Y  IK  E+RM EGDM+ESE +TFVAP+ SGWL+K+  G +G  ++ R WFVL +  L+YF +P   D  PRCII LE + ++  GA+   I L +N  G +KSVK+   D  T  +G H  F  R  +  ERD WV+A + E   F  H  L       AS+    +P  +SA +    PS  G    KF +  R+ R         E        +  GW R +S   +   RRY  L   +G  +   + + ++++    M    I   +R   GS++L D
Sbjct:  382 RTFSPRARHPVDLGRSQSMSS-VGMGSINSVR----KIMERGVNKFNVNPKDGIAYLIDNGLVTDSAQGICSFLCS-AEGLSKRRLGEYFGRDNPKAQEVLRLFLKELKFKNASLDEALRAMVMRFRLPGEAQQMDRIMESFAVRYHE--ENPYVFSCSDTAWVLAFGLMMLNTDMYNRNIKESDKMTEAEFVKNHRGIDQGKDPAKELLEGMYRRIKASEIRMAEGDMYESEVITFVAPKKSGWLKKKSTGYVG--KWKRHWFVLNDAVLYYFLAPQHQDEAPRCIIPLEGINISPIGATDLSIGLRTN-QGFVKSVKMA--DNGTMQQGTHRSFTLRADTNSERDIWVDALRAEVPAF--HMEL------SASRSLSATPATSSAPTPIGTPSESGRRSGKFSASGRTRRR---ATIDLEASSKMQPPVIRGWARTQSDQHQSGGRRYIALFRDIGPDQ---QDNVIYFFGDAAMCDKMIEQHLRTSHGSLNLSD 851          
BLAST of EWM29770.1 vs. NCBI_GenBank
Match: gi|744622620|ref|XP_010997926.1| (PREDICTED: cytohesin-1 isoform X2 [Camelus dromedarius])

HSP 1 Score: 212.231 bits (539), Expect = 9.876e-59
Identity = 135/376 (35.90%), Postives = 204/376 (54.26%), Query Frame = 0
Query:   81 RRISLRTLAPLMRLRSQDIKKHPWIVALNSTR----VKEKRLIEQGIAKFNEKAAAGIDFLIENGVLQRAPADVAVWLNQQALELSKKRLGEYLGGNDSFAQEVLHQLLQDYDFQGMSIDEAMRVFINDIRMPGEAQMLDRILNAFAKRFFETTRNENQYATEDTVYILSFSIMLLNTDLHNRNLPRKEKMRLEDFIRNNRGINAGRDLPPELLSTLYYSIKRKELRMKEGDMWESESLTFVAPRMSGWLEKQLQGQLGFCRFHRFWFVLTNGCLFYFSSPVDRNPRCIIILE-----AVMAIKGASSTEIILYSNGGGIIKSVKIGKRDKATTRGQHTHFIFRTGSQKERDEWVEAFQTE-TEPFQRHHRLGGCG 446
            RR     LA + RL+ +  +    I  L ST     ++  + +  G  KFN     GI FLIENG+L+    D+A +L  +   L+K  +G+YLG  D F  +VLH  ++ ++F  +++ +A+R F+   R+PGEAQ +DR++ AFA+R+ +   N   + + DT Y+LSF+I++LNT LHN N+  K+K  +E FI  NRGIN G DLP ELL  LY SIK +  ++ E D     + TF  P   GWL K   G++    + R WF+LT+ CL+YF    D+ PR II LE      V   K  +  E+ +  N   +IK+ K  + D     G HT +     + +E++EW++      T P +RH  +   G
Sbjct:   26 RRRKQELLADIQRLKDEIAEVANEIENLGSTEERKNMQRNKQVAMGRKKFNMDPKKGIQFLIENGLLKNTCEDIAQFL-YKGEGLNKTAIGDYLGERDEFNIQVLHAFVELHEFTDLNLVQALRQFLWSFRLPGEAQKIDRMMEAFAQRYCQC--NNGVFQSTDTCYVLSFAIIMLNTSLHNPNV--KDKPTVERFIAMNRGINDGGDLPEELLRNLYESIKNEPFKIPEDD-GNDLTHTFFNPDREGWLLKLGGGRVK--TWKRRWFILTDNCLYYFEYTTDKEPRGIIPLENLSIREVEDSKKPNCFELYIPDNKDQVIKACKT-EADGRVVEGNHTVYRISAPTPEEKEEWIKCISCAPTTPGKRHREIAPKG 392          
BLAST of EWM29770.1 vs. NCBI_GenBank
Match: gi|919014222|ref|XP_013391575.1| (PREDICTED: cytohesin-1-like isoform X1 [Lingula anatina])

HSP 1 Score: 211.46 bits (537), Expect = 2.286e-58
Identity = 136/389 (34.96%), Postives = 214/389 (55.01%), Query Frame = 0
Query:   54 PKPKHISGLSLGKYAATTPVGPSRGPSRRISLRTLAPLMRLRSQDIKKHPWIVALN----STRVKEKRLIEQGIAKFNEKAAAGIDFLIENGVLQRAPADVAVWLNQQALELSKKRLGEYLGGNDSFAQEVLHQLLQDYDFQGMSIDEAMRVFINDIRMPGEAQMLDRILNAFAKRFFETTRNENQYATEDTVYILSFSIMLLNTDLHNRNLPRKEKMRLEDFIRNNRGINAGRDLPPELLSTLYYSIKRKELRMKEGDMWESESL--TFVAPRMSGWLEKQLQGQLGFCRFHRFWFVLTNGCLFYFSSPVDRNPRCIIILEAVMAIKGA------SSTEIILYSNGGGIIKSVKIGKRDKATTRGQHTHFIFRTGSQKERDEWVEAFQ 430
            PK  +I  L+   Y + T +  S+  SR +S+    P  +L+ +  +    + +++    S    + + +  G  KFN     GI++LIENG+LQ  P DVA +L  +   L+K  +GEYLG  + F   VL   +  ++F  M + +A+R F+   R+PGEAQ +DR++  FA+R+ E   N   + T DT Y+LSF+I++LNT LHN ++  KEK  ++ FI  N+GIN G DLPP LL++LY SIK++  ++ E D      L  TF  P   GWL KQ  G+  +  + R WF+L + CL+YF    D+ PR II LE +  + G       +S E++  SN   IIK+ K     K    G+H+++     + +E++EW+   +
Sbjct:   15 PKRSNIVTLASVLYTSLTAILKSKWNSRTVSM----PAQQLKDEIAEVTAEMESMDFSEDSKNNPKTKQMSIGRKKFNMDPKKGIEYLIENGLLQNTPEDVAQFL-YKGEGLNKTAIGEYLGERNDFNVNVLKAFVNLHEFSDMILVQALRQFLWSFRLPGEAQKIDRMMECFAERYCEL--NPGVFQTNDTCYVLSFAIIMLNTSLHNPSV--KEKPSVDRFIMMNKGINDGGDLPPALLTSLYESIKKEPFKIPEDD---GNDLMHTFFNPDKEGWLWKQ-GGR--YKSWKRRWFILNDNCLYYFEYTTDKEPRGIIPLENIQVLDGKLDKNRPNSFELV--SNNNEIIKACKTDSEGKV-VEGKHSYYRMSAATPEEKEEWMRCIK 385          
BLAST of EWM29770.1 vs. NCBI_GenBank
Match: gi|744622617|ref|XP_010997925.1| (PREDICTED: cytohesin-1 isoform X1 [Camelus dromedarius])

HSP 1 Score: 213.001 bits (541), Expect = 2.595e-58
Identity = 136/376 (36.17%), Postives = 205/376 (54.52%), Query Frame = 0
Query:   81 RRISLRTLAPLMRLRSQDIKKHPWIVALNST----RVKEKRLIEQGIAKFNEKAAAGIDFLIENGVLQRAPADVAVWLNQQALELSKKRLGEYLGGNDSFAQEVLHQLLQDYDFQGMSIDEAMRVFINDIRMPGEAQMLDRILNAFAKRFFETTRNENQYATEDTVYILSFSIMLLNTDLHNRNLPRKEKMRLEDFIRNNRGINAGRDLPPELLSTLYYSIKRKELRMKEGDMWESESLTFVAPRMSGWLEKQLQGQLGFCRFHRFWFVLTNGCLFYFSSPVDRNPRCIIILE-----AVMAIKGASSTEIILYSNGGGIIKSVKIGKRDKATTRGQHTHFIFRTGSQKERDEWVEAFQTE-TEPFQRHHRLGGCG 446
            RR     LA + RL+ +  +    I  L ST     ++  + +  G  KFN     GI FLIENG+L+    D+A +L  +   L+K  +G+YLG  D F  +VLH  ++ ++F  +++ +A+R F+   R+PGEAQ +DR++ AFA+R+ +   N   + + DT Y+LSF+I++LNT LHN N+  K+K  +E FI  NRGIN G DLP ELL  LY SIK +  ++ E D     + TF  P   GWL K L G++    + R WF+LT+ CL+YF    D+ PR II LE      V   K  +  E+ +  N   +IK+ K  + D     G HT +     + +E++EW++      T P +RH  +   G
Sbjct:   26 RRRKQELLADIQRLKDEIAEVANEIENLGSTEERKNMQRNKQVAMGRKKFNMDPKKGIQFLIENGLLKNTCEDIAQFL-YKGEGLNKTAIGDYLGERDEFNIQVLHAFVELHEFTDLNLVQALRQFLWSFRLPGEAQKIDRMMEAFAQRYCQC--NNGVFQSTDTCYVLSFAIIMLNTSLHNPNV--KDKPTVERFIAMNRGINDGGDLPEELLRNLYESIKNEPFKIPEDD-GNDLTHTFFNPDREGWLLK-LGGRVK--TWKRRWFILTDNCLYYFEYTTDKEPRGIIPLENLSIREVEDSKKPNCFELYIPDNKDQVIKACKT-EADGRVVEGNHTVYRISAPTPEEKEEWIKCISCAPTTPGKRHREIAPKG 391          
BLAST of EWM29770.1 vs. NCBI_GenBank
Match: gi|743711030|ref|XP_010948999.1| (PREDICTED: cytohesin-1 isoform X2 [Camelus bactrianus] >gi|744622626|ref|XP_010997928.1| PREDICTED: cytohesin-1 isoform X4 [Camelus dromedarius])

HSP 1 Score: 209.534 bits (532), Expect = 5.736e-58
Identity = 132/363 (36.36%), Postives = 200/363 (55.10%), Query Frame = 0
Query:   81 RRISLRTLAPLMRLRSQDIKKHPWIVALNST----RVKEKRLIEQGIAKFNEKAAAGIDFLIENGVLQRAPADVAVWLNQQALELSKKRLGEYLGGNDSFAQEVLHQLLQDYDFQGMSIDEAMRVFINDIRMPGEAQMLDRILNAFAKRFFETTRNENQYATEDTVYILSFSIMLLNTDLHNRNLPRKEKMRLEDFIRNNRGINAGRDLPPELLSTLYYSIKRKELRMKEGDMWESESLTFVAPRMSGWLEKQLQGQLGFCRFHRFWFVLTNGCLFYFSSPVDRNPRCIIILE-----AVMAIKGASSTEIILYSNGGGIIKSVKIGKRDKATTRGQHTHFIFRTGSQKERDEWVEAFQTETE 434
            RR     LA + RL+ +  +    I  L ST     ++  + +  G  KFN     GI FLIENG+L+    D+A +L  +   L+K  +G+YLG  D F  +VLH  ++ ++F  +++ +A+R F+   R+PGEAQ +DR++ AFA+R+ +   N   + + DT Y+LSF+I++LNT LHN N+  K+K  +E FI  NRGIN G DLP ELL  LY SIK +  ++ E D     + TF  P   GWL K   G++    + R WF+LT+ CL+YF    D+ PR II LE      V   K  +  E+ +  N   +IK+ K  + D     G HT +     + +E++EW++  +  TE
Sbjct:   26 RRRKQELLADIQRLKDEIAEVANEIENLGSTEERKNMQRNKQVAMGRKKFNMDPKKGIQFLIENGLLKNTCEDIAQFL-YKGEGLNKTAIGDYLGERDEFNIQVLHAFVELHEFTDLNLVQALRQFLWSFRLPGEAQKIDRMMEAFAQRYCQC--NNGVFQSTDTCYVLSFAIIMLNTSLHNPNV--KDKPTVERFIAMNRGINDGGDLPEELLRNLYESIKNEPFKIPEDD-GNDLTHTFFNPDREGWLLKLGGGRVK--TWKRRWFILTDNCLYYFEYTTDKEPRGIIPLENLSIREVEDSKKPNCFELYIPDNKDQVIKACKT-EADGRVVEGNHTVYRISAPTPEEKEEWIKCIRRHTE 379          
BLAST of EWM29770.1 vs. NCBI_GenBank
Match: gi|913300933|ref|XP_013199817.1| (PREDICTED: GTP exchange factor for ARFs 1 isoform X2 [Amyelois transitella])

HSP 1 Score: 211.46 bits (537), Expect = 8.170e-58
Identity = 125/314 (39.81%), Postives = 185/314 (58.92%), Query Frame = 0
Query:  122 GIAKFNEKAAAGIDFLIENGVLQRAPADVAVWLNQQALELSKKRLGEYLGGNDSFAQEVLHQLLQDYDFQGMSIDEAMRVFINDIRMPGEAQMLDRILNAFAKRFFETTRNENQYATEDTVYILSFSIMLLNTDLHNRNLPRKEKMRLEDFIRNNRGINAGRDLPPELLSTLYYSIKRKELRMKEGDMWESESLTFVAPRMSGWLEKQLQGQLGFCRFHRFWFVLTNGCLFYFSSPVDRNPRCIIILEAVMAIKGASSTE----IILYSNGGG-IIKSVKIGKRDKATTRGQHTHFIFRTGSQKERDEWVEAFQ 430
            G  KFN     GI++L ENG+LQR P DVA +L++    LSK  +G+YLG    F + VL   ++ +DF  + + +A+R F+   R+PGEAQ +DR++  FA+R+ +   N + +   DT Y+LSF+I++LNT LHN ++  KEK   E F+  NRGIN G DLP ELL +LY SIK +  ++ E D       TF  P   GWL KQ  G+  +  + R WF+L + CL+YF    D+ PR II LE + +++ AS  +    + LY++GG  +IK+ K     K    G+HT +     + +ERDEW+E  +
Sbjct:  137 GRKKFNMDPKKGIEYLYENGLLQRTPEDVAQFLHK-GEGLSKTAIGDYLGERSDFNEAVLRAFVELHDFTDLILVQALRQFLWSFRLPGEAQKIDRMMECFAQRYCQL--NPDIFTNADTCYVLSFAIIMLNTSLHNPSV--KEKPTPEQFVAMNRGINNGGDLPQELLLSLYESIKTEPFKIPEDDG-NDLMHTFFNPDKEGWLWKQ-GGR--YKSWKRRWFILNDNCLYYFEYTTDKEPRGIIPLENI-SVRAASDRQRPHCLELYASGGADLIKACKTDSEGK-VVEGKHTVYRMSASTAEERDEWIECLR 439          
BLAST of EWM29770.1 vs. NCBI_GenBank
Match: gi|1126477757|ref|XP_019673897.1| (PREDICTED: cytohesin-1 isoform X2 [Felis catus])

HSP 1 Score: 209.534 bits (532), Expect = 9.063e-58
Identity = 134/367 (36.51%), Postives = 200/367 (54.50%), Query Frame = 0
Query:   81 RRISLRTLAPLMRLRSQDIKKHPWIVALNST----RVKEKRLIEQGIAKFNEKAAAGIDFLIENGVLQRAPADVAVWLNQQALELSKKRLGEYLGGNDSFAQEVLHQLLQDYDFQGMSIDEAMRVFINDIRMPGEAQMLDRILNAFAKRFFETTRNENQYATEDTVYILSFSIMLLNTDLHNRNLPRKEKMRLEDFIRNNRGINAGRDLPPELLSTLYYSIKRKELRMKEGDMWESESLTFVAPRMSGWLEKQLQGQLGFCRFHRFWFVLTNGCLFYFSSPVDRNPRCIIILE-----AVMAIKGASSTEIILYSNGGGIIKSVKIGKRDKATTRGQHTHFIFRTGSQKERDEWVEAFQTET--EPF 436
            RR     LA + RL+ +       I  L ST     ++  + +  G  KFN     GI FLIENG+L+ A  D+A +L  +   L+K  +G+YLG  D F  +VLH  ++ ++F  +++ +A+R F+   R+PGEAQ +DR++ AFA+R+     N   + + DT Y+LSF+I++LNT LHN N+  K+K  +E FI  NRGIN G DLP ELL  LY SIK +  ++ E D     + TF  P   GWL K   G++    + R WF+LT+ CL+YF    D+ PR II LE      V   K  +  E+ +  N   +IK+ K  + D     G HT +     + +E+DEW++  +     +PF
Sbjct:   26 RRRKQELLADIQRLKDEIADVANEIETLGSTEERKNMQRNKQVAMGRKKFNMDPKKGIQFLIENGLLKNACEDLAQFL-YKGEGLNKTAIGDYLGERDEFNIQVLHAFVELHEFTDLNLVQALRQFLWSFRLPGEAQKIDRMMEAFAQRYCRC--NNGVFQSTDTCYVLSFAIIMLNTSLHNPNV--KDKPTVERFIAMNRGINDGGDLPEELLRNLYESIKNEPFKIPEDD-GNDLTHTFFNPDREGWLLKLGGGRVK--TWKRRWFILTDNCLYYFEYTTDKEPRGIIPLENLSIREVEDSKKPNCFELYIPDNKDQVIKACKT-EADGRVVEGNHTVYRISAPTPEEKDEWIKCIKAAISRDPF 383          
BLAST of EWM29770.1 vs. NCBI_GenBank
Match: gi|880883156|ref|XP_012968824.1| (cytohesin-1 isoform X2 [Mesocricetus auratus])

HSP 1 Score: 208.764 bits (530), Expect = 1.552e-57
Identity = 132/367 (35.97%), Postives = 202/367 (55.04%), Query Frame = 0
Query:   81 RRISLRTLAPLMRLRSQDIKKHPWIVALNST----RVKEKRLIEQGIAKFNEKAAAGIDFLIENGVLQRAPADVAVWLNQQALELSKKRLGEYLGGNDSFAQEVLHQLLQDYDFQGMSIDEAMRVFINDIRMPGEAQMLDRILNAFAKRFFETTRNENQYATEDTVYILSFSIMLLNTDLHNRNLPRKEKMRLEDFIRNNRGINAGRDLPPELLSTLYYSIKRKELRMKEGDMWESESLTFVAPRMSGWLEKQLQGQLGFCRFHRFWFVLTNGCLFYFSSPVDRNPRCIIILE-----AVMAIKGASSTEIILYSNGGGIIKSVKIGKRDKATTRGQHTHFIFRTGSQKERDEWVEAFQTET--EPF 436
            RR     LA + RL+ +  +    I +L ST     ++  + +  G  KFN     GI FLIEN +L+    D+A +L  +   L+K  +G+YLG  D F+ +VLH  ++ ++F  +++ +A+R F+   R+PGEAQ +DR++ AFA+R+ +   N   + + DT Y+LSF+I++LNT LHN N+  K+K  +E FI  NRGIN G DLP ELL  LY SIK +  ++ E D     + TF  P   GWL K   G++    + R WF+LT+ CL+YF    D+ PR II LE      V   K  +  E+ +  N   +IK+ K  + D     G HT +     + +E+DEW++  +     +PF
Sbjct:   24 RRRKQELLADIQRLKDEIAEVANEIESLGSTEERKNMQRNKQVAMGRKKFNMDPKKGIQFLIENDLLKNTCEDIAQFL-YKGEGLNKTAIGDYLGERDEFSIQVLHAFVELHEFTDLNLVQALRQFLWSFRLPGEAQKIDRMMEAFAQRYCQC--NNGVFQSTDTCYVLSFAIIMLNTSLHNPNV--KDKPTVERFIAMNRGINDGGDLPEELLRNLYESIKNEPFKIPEDD-GNDLTHTFFNPDREGWLLKLGGGRVK--TWKRRWFILTDNCLYYFEYTTDKEPRGIIPLENLSIREVEDSKKPNCFELYIPDNKDQVIKACKT-EADGRVVEGNHTVYRISAPTPEEKDEWIKCIKAAISRDPF 381          
BLAST of EWM29770.1 vs. NCBI_GenBank
Match: gi|919014233|ref|XP_013391579.1| (PREDICTED: cytohesin-1-like isoform X5 [Lingula anatina] >gi|919014235|ref|XP_013391580.1| PREDICTED: cytohesin-1-like isoform X5 [Lingula anatina] >gi|919014238|ref|XP_013391581.1| PREDICTED: cytohesin-1-like isoform X5 [Lingula anatina])

HSP 1 Score: 206.838 bits (525), Expect = 2.505e-57
Identity = 122/315 (38.73%), Postives = 182/315 (57.78%), Query Frame = 0
Query:  122 GIAKFNEKAAAGIDFLIENGVLQRAPADVAVWLNQQALELSKKRLGEYLGGNDSFAQEVLHQLLQDYDFQGMSIDEAMRVFINDIRMPGEAQMLDRILNAFAKRFFETTRNENQYATEDTVYILSFSIMLLNTDLHNRNLPRKEKMRLEDFIRNNRGINAGRDLPPELLSTLYYSIKRKELRMKEGDMWESESLTFVAPRMSGWLEKQLQGQLGFCRFHRFWFVLTNGCLFYFSSPVDRNPRCIIILEAVMAIKGA------SSTEIILYSNGGGIIKSVKIGKRDKATTRGQHTHFIFRTGSQKERDEWVEAFQ 430
            G  KFN     GI++LIENG+LQ  P DVA +L  +   L+K  +GEYLG  + F   VL   +  ++F  M + +A+R F+   R+PGEAQ +DR++  FA+R+ E   N   + T DT Y+LSF+I++LNT LHN ++  KEK  ++ FI  N+GIN G DLPP LL++LY SIK++  ++ E D       TF  P   GWL KQ  G+  +  + R WF+L + CL+YF    D+ PR II LE +  + G       +S E++  SN   IIK+ K     K    G+H+++     + +E++EW+   +
Sbjct:   22 GRKKFNMDPKKGIEYLIENGLLQNTPEDVAQFL-YKGEGLNKTAIGEYLGERNDFNVNVLKAFVNLHEFSDMILVQALRQFLWSFRLPGEAQKIDRMMECFAERYCEL--NPGVFQTNDTCYVLSFAIIMLNTSLHNPSV--KEKPSVDRFIMMNKGINDGGDLPPALLTSLYESIKKEPFKIPEDDG-NDLMHTFFNPDKEGWLWKQ-GGR--YKSWKRRWFILNDNCLYYFEYTTDKEPRGIIPLENIQVLDGKLDKNRPNSFELV--SNNNEIIKACKTDSEGKV-VEGKHSYYRMSAATPEEKEEWMRCIK 324          
The following BLAST results are available for this feature:
BLAST of EWM29770.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585112350|gb|EWM29770.1|0.000e+0100.00cytohesin 1 [Nannochloropsis gaditana][more]
gi|299116099|emb|CBN74515.1|5.978e-7536.02pleckstrin homology (PH) domain-containing protein... [more]
gi|744622620|ref|XP_010997926.1|9.876e-5935.90PREDICTED: cytohesin-1 isoform X2 [Camelus dromeda... [more]
gi|919014222|ref|XP_013391575.1|2.286e-5834.96PREDICTED: cytohesin-1-like isoform X1 [Lingula an... [more]
gi|744622617|ref|XP_010997925.1|2.595e-5836.17PREDICTED: cytohesin-1 isoform X1 [Camelus dromeda... [more]
gi|743711030|ref|XP_010948999.1|5.736e-5836.36PREDICTED: cytohesin-1 isoform X2 [Camelus bactria... [more]
gi|913300933|ref|XP_013199817.1|8.170e-5839.81PREDICTED: GTP exchange factor for ARFs 1 isoform ... [more]
gi|1126477757|ref|XP_019673897.1|9.063e-5836.51PREDICTED: cytohesin-1 isoform X2 [Felis catus][more]
gi|880883156|ref|XP_012968824.1|1.552e-5735.97cytohesin-1 isoform X2 [Mesocricetus auratus][more]
gi|919014233|ref|XP_013391579.1|2.505e-5738.73PREDICTED: cytohesin-1-like isoform X5 [Lingula an... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna929rna929Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications