rna9286, rna9286 (mRNA) Nannochloropsis gaditana

Overview
Namerna9286
Unique Namerna9286
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length2281
Alignment locationKK037252.1:287856..289112 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100147g16.4609.mrna
Orig protein idgnl|cribi|Naga_100147g16.4609
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037252.1supercontigKK037252.1:287856..289112 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100147g16gene9005Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna9286rna9286-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM21428.1cds9256Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna9286 ID=rna9286|Name=rna9286|organism=Nannochloropsis gaditana|type=mRNA|length=2281bp
TGACAGTCCAGATTTCTCCTCCTTCTTATCTATCTCATCCTCCACGCCGC
ACATCTCCTTGACAGGCGCCCCTATGGTCAAGTTCATTTTCTTGTCCATT
TCCCTGGCCCTTTTCCTCCACCATCACGCATATGTCGATGCTCGACATAA
TTTTCATCGGTTCGTTGAACAACGTGACCGTTCCGCCGGTTTCCTCGGTA
TACACCGGCAAATTTTAAGGGGTGCAGGTCGCCCGTCTTCATTTCCAGTC
TCTCTTCCCACCATGTCGCCAACATCGACTCCGCCCACGCCCCTCTCTAC
CTATTACCTCTCCCCCTCGCCAACTTCCTCCAAATTCTGCCCTTCCTCTT
GTGGCGTCGGCTTGTTTCATGCTCTGAGACACCTCCCCCAGCCCACGCGC
ATTTCCTTCCCCCTCTGGGCAACCGCCGCGGAGCTGGCGGGAGACCTGAC
GGCAGATAAGGCGGCTGAGAATGTGGTCATAGTAGGATCAGGCCCTGCAG
GGTACACCGCCGCAATTTATTGCGCTCGAGCAAATTTAAAACCCGTGATC
TTCGAGGGCGCGTCCTCCACCGGGGGACAATTGATGGCCACCACGGACGT
GGAGAATTTCCCGGGCTTTCCGGACGGGATATTGGGACCAGACTTGATGA
TGAATATGAGGAAACAAGCGGCCAGATGGGGGGCGGAGCTGGAGAGTGAC
GACGTGGTAAGCGTGGACCTGTCTTCTCGCCCTTTTTCCGTGACGGGGGC
GAACGGACGGTGCGTGACGGCGCATTCCGTCATTATCGCCACGGGGGCCG
TGGCCAAACGCCTCCGGCTCCCGAACGAGGAGAGGTATTGGTCAAAGGGG
ATCACGGCGTGCGCCATCTGCGACGGCGCCGCCCCCATGTTCAGCGGAGA
ACCCCTGGCTGTGGTGGGGGGGGGAGACAGCGCGGCCGAAGAGGCGGTAT
ACCTGACCAAGTACTCGCCGGAGATCCATCTTTTGGTCCGAGGGGAGAGC
ATGCGGGCGTCCCGGGCCCTCCAGGACCGGGTGTTGGCGAACAGGAAGAT
CTTGGTGCATTACAACACGCGCGTCGTGGACGTGTTGGGCGACGACCCGG
AGGTGCCCTTCCTGAAGAGCCCCGTGACCGCGGTGCAAGTGGCCACGACG
GAGGGGAAGACAGAGGTAATGAAGAGCCTGGCGGTCCGTGGTTTGTTCTA
CGCCATCGGACACGACCCGAACACGGCCTTGTTCGCGCAATTTTTGGATG
TGGACGAGAAAGGCTACGTTCGTGTGGCCCCCGGAACACCCACCACCTCT
TTGTCCGGCGTCTTTGCGGCAGGCGACGTTCAGGACCCGCACTGGCGCCA
GGCCGTGACCGCAGCGGGCTCAGGCTGCATGGCTGCCCTGGCAGCCGAGA
GGTATCTGTCGGGGGAAGGGCTGCTAAGGGAAGTGCACCAGCCTAAGGAC
GACGTGGAGAGGAAAAAGGGGGCAGGAGACAGGGGCGGGGAGAAGGCGGT
CCAAGAGCCGGGAGAAAAGCAGACAGAGGCCACTGCCATACCAAGCGACA
GGAACAGTGGGAGTGGGAGTAGAGGTGGGAGTGGCACCGGCATGCGCAGC
CTCGCGGCTGCCGCCGAAGACGACGCCACCGACACATACCACAAGGGAGA
GGCGGCCTTGCAGTCCCTCCTGGCCTCGAGCGGCAAGCCTATCTTGATCA
TGTTCATGAGCAAGACTTGCGGGCCCTGCCGGATCCTGAAGCCGATTCTT
GGCCGGGTGTTGAAGGAATATGAAGGGCGGGTTCATTTTGTAGAAATCGA
CATCGAGGAACATCCAGACCTGACGTTGCAGTCCTCCGTGGCCGGGACCC
CGACCGTGCAGCTGGTCAATCTGAAGAATCGGGCCGAGGGGGAGGAAGTG
GTGACTCTGAGGGGGGTGAAGAAGGGGAGCGAGTACAAGGCGCAGATCGA
AGAGGCGCTGGGGGGGCATGAGTGAGCACGAGGTAAATGACGACGATGAA
ATAGGTAACAGGGTCGAATGGAAATACAACGGAACGAGAAAGGCAAGGGG
AGGAAAAAATCGTGGTTCAGTCGCTGCGACGGCGCAGACGGCGGCCCTGT
GTAGATGAGGCCATCTTGATGCAGACTACTCAAATGCGTACAAGTTAGCG
AACGATTTTAGCGTTACACACGAAAAGCCTGATTTACTTAAGAATTCCAA
CGTAAGACTGATCTATTGCAAGGCTCCTTTCATAGGCGAGCCCGTTTGAA
AGTCAAAAAAGGATGCGAAATTACCAACACC
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protein sequence of rna9286

>rna9286-protein ID=rna9286-protein|Name=rna9286|organism=Nannochloropsis gaditana|type=polypeptide|length=215bp
MARSLHALFFLAVVSSIFNSIVCVSAFVPPLSPLSYIRREHHGLVDSSFL
VDPITAPQNWPHAPQLSRLHSSSSSNSQSDEKNKRSKRRRRKQGGASSPS
SPSALPSPSSYDASLEELIVDERKSALPRLEDLKMLKSGKAVGPDTGSTG
GKPGILMPRELEEMKQKEKAKQATKGAPAYFDTMTKVTWAAIALLILAEV
VAQVIPKASTVTPGG
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mRNA from alignment at KK037252.1:287856..289112-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna9286 ID=rna9286|Name=rna9286|organism=Nannochloropsis gaditana|type=mRNA|length=1257bp|location=Sequence derived from alignment at KK037252.1:287856..289112- (Nannochloropsis gaditana)
TTTTCATTTTTTGCCTTCTTGTAATGTACAACAGGTGTTAAGGCTTTGCT
TCATTTTTGAGGACTGCGTTGCATTTTGCCGTGGCTTCCGAGAACAAGGA
GCAGATACCTTCTTTCTTCTTCATCACACCACAAAATTGCGACGTGGCGT
CACACAAGCCATGGCGCGATCTTTGCACGCCTTGTTTTTCCTCGCTGTTG
TTTCCTCCATATTCAATAGCATCGTGTGCGTCTCCGCCTTCGTCCCTCCT
TTGTCCCCTTTGTCTTATATACGTCGCGAGCACCATGGCCTGGTTGATTC
GTCATTCCTCGTCGACCCCATCACAGGTACGACCAGAGAGACGATTAAAG
GATGTCCTAGACTTGCTTTCTCTGTTGCCTTTTCCCTTTTGAATTTCTGA
GAAGATGGCTTAAGACAGCGGGCACCTATTTTCGGACGGGGCAGGAAGGC
CATGACGTAGCAGGAACGGAGGACCTTCTCAAGAGTTTGTTCGCATATGA
TATCCATTAATTCAGGACATGAAGACATGATAAATGCTATATGTGCGTAT
CTGGACCCCTCAATGGTCATGTATGTGTTCCGGTCTCTCGAATGCGCTAA
TAGTAGGCCGGTCATGTATGTTTTCCGGTCTCTCGAATGCGCTAATAGTG
TACTCCTCTCCGTCATCCCCTCCGTCTCGTGCCCCTAGCTCCCCAGAACT
GGCCCCATGCGCCGCAGCTATCTCGTCTACACAGCTCATCCAGCAGCAAT
AGCCAATCGGACGAAAAGAATAAACGCTCGAAACGTCGACGGCGCAAGCA
AGGGGGCGCCTCCTCTCCCTCCTCCCCCTCGGCGTTACCAAGCCCGTCTT
CCTACGATGCGAGCCTGGAGGAGCTGATCGTAGACGAACGCAAGTCCGCA
CTGCCTCGTCTTGAGGACTTGAAAATGCTCAAAAGTGGGAAAGCTGTAGG
GCCTGACACGGGCAGTACGGGCGGAAAGCCCGGTATCCTGATGCCGCGAG
AGCTGGAAGAAATGAAGCAGAAAGAAAAGGCAAAACAGGCGACTAAAGGC
GCACCAGCATATTTTGATACAATGACGAAGGTCACATGGGCTGCGATCGC
CCTGCTAATATTGGCGGAGGTGGTGGCGCAAGTGATCCCTAAAGCCTCCA
CAGTCACCCCGGGGGGGTAAGGAGGAAGCTGCCTGACCAAGGCATTTGAA
AAGGCGAACTAAATACGCAAACCAGAAGAATTAATGACCGACACACCCCA
AAATGGC
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Coding sequence (CDS) from alignment at KK037252.1:287856..289112-

>rna9286 ID=rna9286|Name=rna9286|organism=Nannochloropsis gaditana|type=CDS|length=1296bp|location=Sequence derived from alignment at KK037252.1:287856..289112- (Nannochloropsis gaditana)
CTCCCCAGAACTGGCCCCATGCGCCGCAGCTATCTCGTCTACACAGCTCA
TCCAGCAGCAATAGCCAATCGGACGAAAAGAATAAACGCTCGAAACGTCG
ACGGCGCAAGCAAGGGGGCGCCTCCTCTCCCTCCTCCCCCTCGGCGTTAC
CAAGCCCGTCTTCCTACGATGCGAGCCTGGAGGAGCTGATCGTAGACGAA
CGCAAGTCCGCACTGCCTCGTCTTGAGGACTTGAAAATGCTCAAAAGTGG
GAAAGCTGTAGGGCCTGACACGGGCAGTACGGGCGGAAAGCCCGGTATCC
TGATGCCGCGAGAGCTGGAAGAAATGAAGCAGAAAGAAAAGGCAAAACAG
GCGACTAAAGGCGCACCAGCATATTTTGATACAATGACGAAGGTCACATG
GGCTGCGATCGCCCTGCTAATATTGGCGGAGGTGGTGGCGCAAGTGATCC
CTAAAGCCTCCACAGTCACCCCGGGGGGGTAAATGGCGCGATCTTTGCAC
GCCTTGTTTTTCCTCGCTGTTGTTTCCTCCATATTCAATAGCATCGTGTG
CGTCTCCGCCTTCGTCCCTCCTTTGTCCCCTTTGTCTTATATACGTCGCG
AGCACCATGGCCTGGTTGATTCGTCATTCCTCGTCGACCCCATCACAGCT
CCCCAGAACTGGCCCCATGCGCCGCAGCTATCTCGTCTACACAGCTCATC
CAGCAGCAATAGCCAATCGGACGAAAAGAATAAACGCTCGAAACGTCGAC
GGCGCAAGCAAGGGGGCGCCTCCTCTCCCTCCTCCCCCTCGGCGTTACCA
AGCCCGTCTTCCTACGATGCGAGCCTGGAGGAGCTGATCGTAGACGAACG
CAAGTCCGCACTGCCTCGTCTTGAGGACTTGAAAATGCTCAAAAGTGGGA
AAGCTGTAGGGCCTGACACGGGCAGTACGGGCGGAAAGCCCGGTATCCTG
ATGCCGCGAGAGCTGGAAGAAATGAAGCAGAAAGAAAAGGCAAAACAGGC
GACTAAAGGCGCACCAGCATATTTTGATACAATGACGAAGGTCACATGGG
CTGCGATCGCCCTGCTAATATTGGCGGAGGTGGTGGCGCAAGTGATCCCT
AAAGCCTCCACAGTCACCCCGGGGGGGTAAATGGCGCGATCTTTGCACGC
CTTGTTTTTCCTCGCTGTTGTTTCCTCCATATTCAATAGCATCGTGTGCG
TCTCCGCCTTCGTCCCTCCTTTGTCCCCTTTGTCTTATATACGTCGCGAG
CACCATGGCCTGGTTGATTCGTCATTCCTCGTCGACCCCATCACAG
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Synonyms
Publications