rna928, rna928 (mRNA) Nannochloropsis gaditana

Overview
Namerna928
Unique Namerna928
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1791
Alignment locationCM002456.1:746969..747954 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100022g42.847.mrna
Orig protein idgnl|cribi|Naga_100022g42.847
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002456.1supercontigCM002456.1:746969..747954 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100022g42gene891Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna928rna928-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM29748.1cds928Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna928 ID=rna928|Name=rna928|organism=Nannochloropsis gaditana|type=mRNA|length=1791bp
ATGGTCAGCATGAAGGATCCAGCGTGGAAAAAGGTGCGGGCGTTACCCGA
GGCACCGGACTCGGAGCCTGGAGTCGTGGCCTACCGGTGTGCCATCGTGC
ACAGCAAGTCCCTGACGGAACTTGAGATGCTGCCTGACGGGTTGCTGGTG
GTCGATCATGCTCGAGATGGGCTGATCTTGGATTTGCTGGATGTGGAGCA
CAAGACTTTGGAGGAGGTCGATGAAATTGCTGCGCGCGCTCATGCTCATG
AGATTGTTGAGTTCCACGGCCGCATCATGATGCCCGGCTTCGTCGACACG
CACGCCCATGCTCCCCAATACGCTTTCACAGGCACAGGAATGAATCTACC
TCTGCTTAAGTGGCTGAACACTTACACGTTTCCGTGCGAGGCCAAATTTG
CCGACCTCAACTTCGCCCAAGACGTGTATTCTAAGTCAGTCCGTCGACAC
TTGATGAACGGCACGACCACCTGCTCCTACTTCGCCACTTTGCACCTGGA
GGCTTCCAAGCTCCTGGTCGACATAGTGCGAGAGCAGGGTCAGAGGGCTT
ACGTGGGGAAGGTCTCCATGGACCGCAATTCTCCGGATTTCTACATGGAG
ACGACGGAGCAGGGGATTAAGGACGTGGCCGATTTTGTACGCTACACGAA
GCGCACTTCTGTGTGCCCACAGGCAGCTCCCGGCGCCTCCTCCGTGCCTC
CACGCATGAAGCGGGTCGCCTCCGAGACCCGCATCGTGCGTCGCGAGAGC
TTGGGAGAGGCGACAGACGTGGAGTCGCCGGAGACGAGCGATCCAGAGAA
CGAAGAAGCGGTCAGAGCGACAGGCACTGCTAGTCCCACTGAGGATAAAG
GCGGCGAGAAGAGGGACTCATGCTCATTGCCAAGCGGGGCTCTCACGGCA
GCCAACGCCCTGCCCCCGCCCGTGGGAGGCAAAAGCGGAAGGATCACTCC
GGGTGCTACCGGTAACCTTGCCGCGTCTTCCAGTCAGAGCGACCCCCACA
AAACCCGGACGGTAGAGACGCCTACCCCCAGGTCTTATGCATCGCCCCCC
CCACTGGTCACGCCTGTCCTCACCCCGCGCTTCGTGCCCAGCTGCACGCC
CGAGATGCTCCAAGCCCTGGGAGAGCTCTCACGAGTACAAAACCTCCCTG
TGCAATCCCACCTAAGCGAGTCGCAAAGAGAGATTGCCTGGGTGCGGGAG
CTACATCCCGAGTGCGAGCACTACACGGACGTGTACCGCACCTTCGGCCT
CTTGCATGAGAGGGCCTACTTCGCTCACTGCTGTCACTGCGGAGCCGACG
AGCAAGCGATCCTCAAAGTCAACGATGTGGGCGTCGCGCACTGTCCCTCC
TCGAACTTCATGCTAGGCAGCGGTGTTTTAAATGTGCGCCGACTACTGGA
TCGCGGCATCAAGGTAGGTCTCGGGACAGACGTCGCGGGTGGCTATTCGA
CTTCGGTGCTGGACGCCGCACGCCAAGCTATCATTGCGTCGCGCTGTATC
TCGTTCACCGAGAAGGACGAGCAAGGTCAGCCTTACGAAGCTCTGACTAT
TGATGAAGTCTTCTTCTTAGCGACGCAAGGAGGGGCAAACGTGCTAGGCA
TAGGCGCGGCGGTTGGAAATTTTTCTCCCGGGAAGTACTTAGACGCCGTA
GTCGTAGACCCCAAAACAGAGGATGGGCCACTCGACATGTTCGATGGCGA
GTACCTGCACTCTGCCTTCGAAAAGTTTCTCTTTCTAGGCGATGACCGTA
ACATAGAGCAGGTCTACGTCGGGGGGAAACGGGTATTGTGA
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protein sequence of rna928

>rna928-protein ID=rna928-protein|Name=rna928|organism=Nannochloropsis gaditana|type=polypeptide|length=156bp
MRDTPEKRKDYKHYWYAPVYTGLAGSAVGAAVGAWRGQSALLFSLHLGIG
YTIFGASFSSSLYGLEYVRQEEGILNWVGAGAVAGAVTSLITAGPRQAGR
GAVFFGGMGMIAESISDLVESSISNYKDRRAKQRFGHPTAPSAWGGDKAI
GRAEKR
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mRNA from alignment at CM002456.1:746969..747954-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna928 ID=rna928|Name=rna928|organism=Nannochloropsis gaditana|type=mRNA|length=986bp|location=Sequence derived from alignment at CM002456.1:746969..747954- (Nannochloropsis gaditana)
ATGCGGGACACTCCGGAAAAGAGAAAGGATTACAAGCATTACTGGTACGC
ACCCGTATATACCGGTAAGTACCCTGGCTTTTTATGTCTACGACTGCCTC
CTGAGCTTTAGCAGACATCTTACGACTGGTTAATCAATCATGGCCATGAG
CGCTTTCGGTGTCTGCATCTTCTTTGAAATGTCACAATGCTGATCACTTT
GATATTTCCCCCGTCACAATGTAATAAGGTCTTGCTGGTTCAGCTGTAGG
AGCAGCAGTCGGGGCATGGCGCGGCCAATCAGCTTTATTATTTTCACTAC
ATTTGGGAATCGGCTACACCATATTCGGGGCATCATTTAGCTGTAAGCGT
TTGTAGTGTGTAACGCTAAAAGCTTAGTGTGTGTGACCAGAAAACCATAG
ACACAAGAAGGCATTTCCAGACGAGGGAGCCGAGGGTTTTAAAGACATAT
ATGGTGTGTGCTTTATAAAATTCAGGTCTTTTGACGTGCTCGCGGCTAAA
AAATATTGCACTTTCAAACAGCTTCACTTTATGGCTTGGAGTACGTACGA
CAAGAGGAAGGCATACTAAACTGGGTGGGCGCCGGTGCTGTCGCAGGGGC
TGTGACCTCTCTCATCACTGGTAAATTTGCTTATTAGGTCACATGAATTC
GATAAATTTGAAATGCTACACTCGCATCAAATTATATCGAATAAGGTGCT
TTGTCTGCGTCTGATCTCAGAGCAAAGCGCATGAAACTAGCGGATTTCTC
ACTCTGACCTGTATTAATTTCACAACATATTCGACAATCAAGCTGGGCCT
CGCCAAGCAGGCCGAGGAGCCGTTTTCTTCGGTGGAATGGGCATGATTGC
AGAAAGTATTTCCGATTTGGTGGAGAGCTCAATCTCAAATTACAAGGATA
GGAGGGCCAAGCAACGCTTCGGACACCCCACTGCCCCATCTGCATGGGGA
GGGGACAAGGCGATAGGAAGGGCAGAGAAGCGATGA
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Coding sequence (CDS) from alignment at CM002456.1:746969..747954-

>rna928 ID=rna928|Name=rna928|organism=Nannochloropsis gaditana|type=CDS|length=1884bp|location=Sequence derived from alignment at CM002456.1:746969..747954- (Nannochloropsis gaditana)
CTGGGCCTCGCCAAGCAGGCCGAGGAGCCGTTTTCTTCGGTGGAATGGGC
ATGATTGCAGAAAGTATTTCCGATTTGGTGGAGAGCTCAATCTCAAATTA
CAAGGATAGGAGGGCCAAGCAACGCTTCGGACACCCCACTGCCCCATCTG
CATGGGGAGGGGACAAGGCGATAGGAAGGGCAGAGAAGCGATGACTTCAC
TTTATGGCTTGGAGTACGTACGACAAGAGGAAGGCATACTAAACTGGGTG
GGCGCCGGTGCTGTCGCAGGGGCTGTGACCTCTCTCATCACTGGTCTTGC
TGGTTCAGCTGTAGGAGCAGCAGTCGGGGCATGGCGCGGCCAATCAGCTT
TATTATTTTCACTACATTTGGGAATCGGCTACACCATATTCGGGGCATCA
TTTAGCTATGCGGGACACTCCGGAAAAGAGAAAGGATTACAAGCATTACT
GGTACGCACCCGTATATACCGCTGGGCCTCGCCAAGCAGGCCGAGGAGCC
GTTTTCTTCGGTGGAATGGGCATGATTGCAGAAAGTATTTCCGATTTGGT
GGAGAGCTCAATCTCAAATTACAAGGATAGGAGGGCCAAGCAACGCTTCG
GACACCCCACTGCCCCATCTGCATGGGGAGGGGACAAGGCGATAGGAAGG
GCAGAGAAGCGATGACTTCACTTTATGGCTTGGAGTACGTACGACAAGAG
GAAGGCATACTAAACTGGGTGGGCGCCGGTGCTGTCGCAGGGGCTGTGAC
CTCTCTCATCACTGGTCTTGCTGGTTCAGCTGTAGGAGCAGCAGTCGGGG
CATGGCGCGGCCAATCAGCTTTATTATTTTCACTACATTTGGGAATCGGC
TACACCATATTCGGGGCATCATTTAGCTATGCGGGACACTCCGGAAAAGA
GAAAGGATTACAAGCATTACTGGTACGCACCCGTATATACCGCTGGGCCT
CGCCAAGCAGGCCGAGGAGCCGTTTTCTTCGGTGGAATGGGCATGATTGC
AGAAAGTATTTCCGATTTGGTGGAGAGCTCAATCTCAAATTACAAGGATA
GGAGGGCCAAGCAACGCTTCGGACACCCCACTGCCCCATCTGCATGGGGA
GGGGACAAGGCGATAGGAAGGGCAGAGAAGCGATGACTTCACTTTATGGC
TTGGAGTACGTACGACAAGAGGAAGGCATACTAAACTGGGTGGGCGCCGG
TGCTGTCGCAGGGGCTGTGACCTCTCTCATCACTGGTCTTGCTGGTTCAG
CTGTAGGAGCAGCAGTCGGGGCATGGCGCGGCCAATCAGCTTTATTATTT
TCACTACATTTGGGAATCGGCTACACCATATTCGGGGCATCATTTAGCTA
TGCGGGACACTCCGGAAAAGAGAAAGGATTACAAGCATTACTGGTACGCA
CCCGTATATACCGCTGGGCCTCGCCAAGCAGGCCGAGGAGCCGTTTTCTT
CGGTGGAATGGGCATGATTGCAGAAAGTATTTCCGATTTGGTGGAGAGCT
CAATCTCAAATTACAAGGATAGGAGGGCCAAGCAACGCTTCGGACACCCC
ACTGCCCCATCTGCATGGGGAGGGGACAAGGCGATAGGAAGGGCAGAGAA
GCGATGACTTCACTTTATGGCTTGGAGTACGTACGACAAGAGGAAGGCAT
ACTAAACTGGGTGGGCGCCGGTGCTGTCGCAGGGGCTGTGACCTCTCTCA
TCACTGGTCTTGCTGGTTCAGCTGTAGGAGCAGCAGTCGGGGCATGGCGC
GGCCAATCAGCTTTATTATTTTCACTACATTTGGGAATCGGCTACACCAT
ATTCGGGGCATCATTTAGCTATGCGGGACACTCCGGAAAAGAGAAAGGAT
TACAAGCATTACTGGTACGCACCCGTATATACCG
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Synonyms
Publications