EWM29748.1, cds928 (CDS) Nannochloropsis gaditana

Overview
NameEWM29748.1
Unique Namecds928
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002456.1:747891..747954 -
Alignment locationCM002456.1:747613..747726 -
Alignment locationCM002456.1:747335..747433 -
Alignment locationCM002456.1:746969..747162 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM29748.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100022g42.847.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002456.1supercontigCM002456.1:747891..747954 -
CM002456.1supercontigCM002456.1:747613..747726 -
CM002456.1supercontigCM002456.1:747335..747433 -
CM002456.1supercontigCM002456.1:746969..747162 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
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BLAST of EWM29748.1 vs. NCBI_GenBank
Match: gi|585112328|gb|EWM29748.1| (hypothetical protein Naga_100022g42 [Nannochloropsis gaditana])

HSP 1 Score: 314.694 bits (805), Expect = 1.604e-108
Identity = 156/156 (100.00%), Postives = 156/156 (100.00%), Query Frame = 0 
Query:    1 MRDTPEKRKDYKHYWYAPVYTGLAGSAVGAAVGAWRGQSALLFSLHLGIGYTIFGASFSSSLYGLEYVRQEEGILNWVGAGAVAGAVTSLITAGPRQAGRGAVFFGGMGMIAESISDLVESSISNYKDRRAKQRFGHPTAPSAWGGDKAIGRAEKR 156
            MRDTPEKRKDYKHYWYAPVYTGLAGSAVGAAVGAWRGQSALLFSLHLGIGYTIFGASFSSSLYGLEYVRQEEGILNWVGAGAVAGAVTSLITAGPRQAGRGAVFFGGMGMIAESISDLVESSISNYKDRRAKQRFGHPTAPSAWGGDKAIGRAEKR
Sbjct:    1 MRDTPEKRKDYKHYWYAPVYTGLAGSAVGAAVGAWRGQSALLFSLHLGIGYTIFGASFSSSLYGLEYVRQEEGILNWVGAGAVAGAVTSLITAGPRQAGRGAVFFGGMGMIAESISDLVESSISNYKDRRAKQRFGHPTAPSAWGGDKAIGRAEKR 156
The following BLAST results are available for this feature:
BLAST of EWM29748.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585112328|gb|EWM29748.1|1.604e-108100.00hypothetical protein Naga_100022g42 [Nannochlorops... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna928rna928Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications