rna9262, rna9262 (mRNA) Nannochloropsis gaditana

Overview
Namerna9262
Unique Namerna9262
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1424
Alignment locationKK037252.1:231094..231843 +

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100019g6.522.mrna
Orig protein idgnl|cribi|Naga_100019g6.522
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037252.1supercontigKK037252.1:231094..231843 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100019g6gene8984Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna9262rna9262-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM21500.1cds9232Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna9262 ID=rna9262|Name=rna9262|organism=Nannochloropsis gaditana|type=mRNA|length=1424bp
GAGAGCAACGTCTGAGTGCAACATGATGTTCTGGCCTCGGACTTAAGGAT
AAGATCGCACGTCGACCATCCAACTGCGAATTCTGCGCAAAAATTAAATT
CATTGCCTCTACCCAGGCGTTAATAAACGAGGGCCATCAGACTTACCGAG
GGAAAAGCATTCTATATCTTCCTGCGCATCCTCACCTCGGTATCATGATG
CTCCACTCCACACCGAACCCTACGATCAATGTCACGATAGTCCTCCTCCA
CACACATCCCAAAATCTTATCAGGCCCTGATAATGCCATCTCCGATGAGC
TTGACCCCGGCATCGCAAGCTTTTTTGGCCCAGATCTACCCTCCGAACGC
GCCCCCTGCAAGAGACATGCCTCTCGACGTGGGTCGGGCCAAGATGGAGG
CGGCCGCACGGGCATTGGGGGGGCCATACCTAAGCGTCCGACGCGTGGAG
GACCTCAGTATCCCCTCGTTGGATGGCAACGCTTCAGTGAAGGTCCGGGT
GTATTCTCCCAAAATTGACGCGACGCTCCCGGTTCTTCTGTACGCGCACG
GCGGCGGTTTCGTCAAAGGCAACCTTGAGACGCACGACCAGCTGTGCCGG
CGTATAGCGGTGGGGTCGGATCATGTTGTGGTCGCGGTAGATTACCGGCT
GAGTCCGGAGCACCGCTTTCCCGCTGCATTGGACGACGTGGAGGCGGCGT
ACACTTGGGTGGTGGGGCAGGTGGCCTGGGACGCGACTCGCATTAGCCTG
GCGGGGGACAGCGCGGGTGGCAATTTAATGAGCGCCTTAGCAGTGAGGCT
TGCGGGTAAGCCGGAGTCCCAGGTCCGGCCAGAGCATCGCATCAGGCGGC
AGGTCCTCATTTACCCCGTTGTCGACGTGCGACGCCGGGGGGAGTCCTAC
GAGACCTACGGCACAGGCTACGGGCTGTCCGCTACCGCCATCGACTATTA
CCTCGAGAGCTACCTGGGGCCCGCGTACACAGACGCCAAAGACGAAGACG
CCCGCCGCGCCGTGCTGGAGAAACCGGAGGTCTCCACCATCCTATACCAG
CATCCTGAGAAGCTCCCACCCACCCTGATTTTGACCGCGGCGTGCGACCC
GCTGGCCAGCGAGGCGGGCTTGCTGAAGGAGCGCTTGGAAGCGGCAGGAG
TGCCTGTGCGTCAGATAATATATCCAGACACGGTCCACGCCTACATGACG
TTCTTCGACATTTTTCCGGAGTCGGAGCAGAGTCTGGAGGAGATCGTGAG
GTTTTTGAACGAGGACATCGGGTCCTGAGAGACATGCAAAAGCGGGGGAC
AGCTGGGAAGGAGGATGGGCTTAAACTGGTCCCTTGTTTAATTTATAGGA
TGCCACGCAGGTATCGCTTGCTTGTGGGAAAGTATTGAGAACTGTGGCCA
GATCGGGAGAGCTGTGGACAACCT
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protein sequence of rna9262

>rna9262-protein ID=rna9262-protein|Name=rna9262|organism=Nannochloropsis gaditana|type=polypeptide|length=249bp
MDFGKCSAILAGRKSCEVGTQRHHHSEEEVQEGYLLGQVIDLRPSAPSSE
SVHACEPPQETSTHPSNKEETILSVEAQAQQSVHKLQEGLTALPVRELVK
TFRQAQEERVQAYNFFDQGLAQILSSRAFTEYDALCAEATAKFAVLSNLV
NAVAECLGRDPYNRVVLARLLRRIQAEEKEKLSLTAALHLEKFRLATSTC
SGAAGNENSDGREAMLLREGARRLETNIRHVVCRINDVLEEIRYEEEEE
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mRNA from alignment at KK037252.1:231094..231843+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna9262 ID=rna9262|Name=rna9262|organism=Nannochloropsis gaditana|type=mRNA|length=750bp|location=Sequence derived from alignment at KK037252.1:231094..231843+ (Nannochloropsis gaditana)
ATGGACTTTGGTAAGTGCTCGGCAATATTAGCGGGACGAAAAAGCTGCGA
GGTAGGAACTCAAAGGCACCATCActccgaggaagaggtgcagGAGGGGT
ACCTCCTGGGGCAGGTGATAGACCTGCGACCgtcggctccctcctctgag
AGCGTGCACGCCTGCGAACCACCTCAAGAGACGTCTACCCACCCATCGAA
CAAGGAGGAAACCATCCTCTCCGTTGAGGCCCAGGCACAACAGAGCGTGC
ACAAGTTGCAGGAGGGGTTGACGGCGTTGCCTGTGAGGGAACTGGTGAAA
ACCTTCCGGCAAGCGCAGGAGGAGCGCGTTCAAGCCTACAATTTTTTTGA
TCAGGGCTTGGCCCAAATTCTGTCGTCACGGGCATTCACTGAATACGATG
CATTGTGCGCGGAAGCTACGGCCAAGTTCGCAGTTTTAAGCAACCTTGTG
AACGCGGTTGCGGAGTGCCTGGGGAGGGATCCCTACAACAGAGTAGTTCT
GGCAAGGTTACTTCGTCGAATACaagcggaagaaaaggagaaattGTCTC
TCACAGCCGCCCTGCATCTGGAAAAGTTTAGACTCGCGACTTCCACGTGC
AGTGGCGCTGCAGGAAATGAAAATTctgacgggcgggaagcaaTGCTTTT
GCGTGAAGGCGCTAGACGGTTAGAAACGAACATCAGACATGTTGTATGTC
GCATAAATGATGTGTTGGAGGAAATAAGgtatgaggaagaggaagaatag
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Coding sequence (CDS) from alignment at KK037252.1:231094..231843+

>rna9262 ID=rna9262|Name=rna9262|organism=Nannochloropsis gaditana|type=CDS|length=750bp|location=Sequence derived from alignment at KK037252.1:231094..231843+ (Nannochloropsis gaditana)
ATGGACTTTGGTAAGTGCTCGGCAATATTAGCGGGACGAAAAAGCTGCGA
GGTAGGAACTCAAAGGCACCATCActccgaggaagaggtgcagGAGGGGT
ACCTCCTGGGGCAGGTGATAGACCTGCGACCgtcggctccctcctctgag
AGCGTGCACGCCTGCGAACCACCTCAAGAGACGTCTACCCACCCATCGAA
CAAGGAGGAAACCATCCTCTCCGTTGAGGCCCAGGCACAACAGAGCGTGC
ACAAGTTGCAGGAGGGGTTGACGGCGTTGCCTGTGAGGGAACTGGTGAAA
ACCTTCCGGCAAGCGCAGGAGGAGCGCGTTCAAGCCTACAATTTTTTTGA
TCAGGGCTTGGCCCAAATTCTGTCGTCACGGGCATTCACTGAATACGATG
CATTGTGCGCGGAAGCTACGGCCAAGTTCGCAGTTTTAAGCAACCTTGTG
AACGCGGTTGCGGAGTGCCTGGGGAGGGATCCCTACAACAGAGTAGTTCT
GGCAAGGTTACTTCGTCGAATACaagcggaagaaaaggagaaattGTCTC
TCACAGCCGCCCTGCATCTGGAAAAGTTTAGACTCGCGACTTCCACGTGC
AGTGGCGCTGCAGGAAATGAAAATTctgacgggcgggaagcaaTGCTTTT
GCGTGAAGGCGCTAGACGGTTAGAAACGAACATCAGACATGTTGTATGTC
GCATAAATGATGTGTTGGAGGAAATAAGgtatgaggaagaggaagaatag
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Synonyms
Publications