EWM21500.1, cds9232 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM21500.1 vs. NCBI_GenBank
Match: gi|585101730|gb|EWM21500.1| (hypothetical protein Naga_100019g6 [Nannochloropsis gaditana]) HSP 1 Score: 506.523 bits (1303), Expect = 0.000e+0 Identity = 249/249 (100.00%), Postives = 249/249 (100.00%), Query Frame = 0 Query: 1 MDFGKCSAILAGRKSCEVGTQRHHHSEEEVQEGYLLGQVIDLRPSAPSSESVHACEPPQETSTHPSNKEETILSVEAQAQQSVHKLQEGLTALPVRELVKTFRQAQEERVQAYNFFDQGLAQILSSRAFTEYDALCAEATAKFAVLSNLVNAVAECLGRDPYNRVVLARLLRRIQAEEKEKLSLTAALHLEKFRLATSTCSGAAGNENSDGREAMLLREGARRLETNIRHVVCRINDVLEEIRYEEEEE 249 MDFGKCSAILAGRKSCEVGTQRHHHSEEEVQEGYLLGQVIDLRPSAPSSESVHACEPPQETSTHPSNKEETILSVEAQAQQSVHKLQEGLTALPVRELVKTFRQAQEERVQAYNFFDQGLAQILSSRAFTEYDALCAEATAKFAVLSNLVNAVAECLGRDPYNRVVLARLLRRIQAEEKEKLSLTAALHLEKFRLATSTCSGAAGNENSDGREAMLLREGARRLETNIRHVVCRINDVLEEIRYEEEEE Sbjct: 1 MDFGKCSAILAGRKSCEVGTQRHHHSEEEVQEGYLLGQVIDLRPSAPSSESVHACEPPQETSTHPSNKEETILSVEAQAQQSVHKLQEGLTALPVRELVKTFRQAQEERVQAYNFFDQGLAQILSSRAFTEYDALCAEATAKFAVLSNLVNAVAECLGRDPYNRVVLARLLRRIQAEEKEKLSLTAALHLEKFRLATSTCSGAAGNENSDGREAMLLREGARRLETNIRHVVCRINDVLEEIRYEEEEE 249
BLAST of EWM21500.1 vs. NCBI_GenBank
Match: gi|553181310|ref|XP_005853542.1| (hypothetical protein NGA_2120020, partial [Nannochloropsis gaditana CCMP526] >gi|553194561|ref|XP_005855988.1| hypothetical protein NGA_2120010, partial [Nannochloropsis gaditana CCMP526] >gi|422293072|gb|EKU20373.1| hypothetical protein NGA_2120010, partial [Nannochloropsis gaditana CCMP526] >gi|422295519|gb|EKU22818.1| hypothetical protein NGA_2120020, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 501.516 bits (1290), Expect = 2.549e-179 Identity = 247/249 (99.20%), Postives = 248/249 (99.60%), Query Frame = 0 Query: 1 MDFGKCSAILAGRKSCEVGTQRHHHSEEEVQEGYLLGQVIDLRPSAPSSESVHACEPPQETSTHPSNKEETILSVEAQAQQSVHKLQEGLTALPVRELVKTFRQAQEERVQAYNFFDQGLAQILSSRAFTEYDALCAEATAKFAVLSNLVNAVAECLGRDPYNRVVLARLLRRIQAEEKEKLSLTAALHLEKFRLATSTCSGAAGNENSDGREAMLLREGARRLETNIRHVVCRINDVLEEIRYEEEEE 249 MDFGKCSAILAGRKSCEVG+QRHHHSEEEVQEG LLGQVIDLRPSAPSSESVHACEPPQETSTHPSNKEETILSVEAQAQQSVHKLQEGLTALPVRELVKTFRQAQEERVQAYNFFDQGLAQILSSRAFTEYDALCAEATAKFAVLSNLVNAVAECLGRDPYNRVVLARLLRRIQAEEKEKLSLTAALHLEKFRLATSTCSGAAGNENSDGREAMLLREGARRLETNIRHVVCRINDVLEEIRYEEEEE Sbjct: 6 MDFGKCSAILAGRKSCEVGSQRHHHSEEEVQEGCLLGQVIDLRPSAPSSESVHACEPPQETSTHPSNKEETILSVEAQAQQSVHKLQEGLTALPVRELVKTFRQAQEERVQAYNFFDQGLAQILSSRAFTEYDALCAEATAKFAVLSNLVNAVAECLGRDPYNRVVLARLLRRIQAEEKEKLSLTAALHLEKFRLATSTCSGAAGNENSDGREAMLLREGARRLETNIRHVVCRINDVLEEIRYEEEEE 254
BLAST of EWM21500.1 vs. NCBI_GenBank
Match: gi|397574767|gb|EJK49372.1| (hypothetical protein THAOC_31760 [Thalassiosira oceanica]) HSP 1 Score: 134.035 bits (336), Expect = 1.384e-34 Identity = 80/222 (36.04%), Postives = 124/222 (55.86%), Query Frame = 0 Query: 36 LGQVIDLRPSAPSSESVHACEP--------------PQETSTHPSNKEETILSVEAQAQQSVHKLQEGLTALPVRELVKTFRQAQEERVQAYNFFDQGLAQILSSRAFTEYDALCAEATAKFAVLSNLVNAVAECLGRDPYNRVVLARLLRRIQAEEKEKLSLTAALHLEKFRLATSTCSGAAGNENSDGREAMLLREGARRLETNIRHVVCRINDVLEEIR 243 +GQ ID+ PS+++ A P P T + +++A ++ +++E + + V +L++ QAQ++RV AY FD GL +L+S T Y ALCA+ATA F+VLS+ +N++ CL R+ + R AR + ++Q +E EKL+LTAA HLE+ RL + G A + D R A LLREG + L+ + VV IND +EE+R Sbjct: 46 MGQTIDM--DQPSTDADRAGPPGPLGGVSAASLPADPAVPETMSDDDRRKHDAMKADRERRGKEIREHMRTMDVADLLRLVFQAQQDRVAAYKVFDSGLETVLASGNITSYPALCAKATATFSVLSDTINSIRSCL-REQHGRTDAARAVEQLQKKEGEKLNLTAAAHLERLRLRNAQVEGGARDNGEDERTAALLREGIKTLDGKVAKVVEEINDCIEELR 264
BLAST of EWM21500.1 vs. NCBI_GenBank
Match: gi|223999303|ref|XP_002289324.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220974532|gb|EED92861.1| predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 115.546 bits (288), Expect = 1.648e-27 Identity = 66/158 (41.77%), Postives = 93/158 (58.86%), Query Frame = 0 Query: 86 LQEGLTALPVRELVKTFRQAQEERVQAYNFFDQGLAQILSSRAFTEYDALCAEATAKFAVLSNLVNAVAECLGRDPYNRVVLARLLRRIQAEEKEKLSLTAALHLEKFRLATSTCSGAAGNENSDGREAMLLREGARRLETNIRHVVCRINDVLEEIR 243 +Q L ++ V +L+ AQ+ERV Y FD+GL+ IL S T Y ALCA+ TA F+VLS+ +N V L D + R + ++ ++Q E EKL+LTAALHLE+ RL S G ++S LL+ G + LE+ I V IN+VLEE+R Sbjct: 111 IQSTLQSMNVSDLLGMIFGAQQERVTTYKLFDEGLSTILCSGNITTYPALCAKVTASFSVLSDTINGVKSSL-VDNHERTDIGGVISQLQKHESEKLNLTAALHLERLRLKNSEL--GVGTDDSGENTLRLLKGGIQSLESKIATAVESINEVLEELR 265
BLAST of EWM21500.1 vs. NCBI_GenBank
Match: gi|1210531612|dbj|GAX09968.1| (hypothetical protein FisN_11Lh043 [Fistulifera solaris]) HSP 1 Score: 109.768 bits (273), Expect = 1.977e-25 Identity = 62/160 (38.75%), Postives = 98/160 (61.25%), Query Frame = 0 Query: 84 HKLQEGLTALPVRELVKTFRQAQEERVQAYNFFDQGLAQILSSRAFTEYDALCAEATAKFAVLSNLVNAVAECLGRDPYNRVVLARLLRRIQAEEKEKLSLTAALHLEKFRLATSTCSGAAGNENSDGREAMLLREGARRLETNIRHVVCRINDVLEEIR 243 ++++E L +L EL+K F +AQE+RVQ Y +DQGL +IL + EY +LC E TA F+VLS+ +N + + L + + +A L+ ++Q +E+ KL+LTAALHLE+ R+ + SD R LL EGA L +R + IN++++E+R Sbjct: 92 NEMEEKLGSLNKEELIKCFFEAQEQRVQTYRLYDQGLDRILETGQIHEYPSLCTETTATFSVLSDSINNIRKVL-LEKLEQTSVAELITQLQDKERTKLNLTAALHLERIRI--------HNQQASDDRITKLLMEGAASLRAQMRENIEEINEIMDELR 242
BLAST of EWM21500.1 vs. NCBI_GenBank
Match: gi|1210526848|dbj|GAX14496.1| (hypothetical protein FisN_11Hh043 [Fistulifera solaris]) HSP 1 Score: 105.531 bits (262), Expect = 6.221e-24 Identity = 61/160 (38.12%), Postives = 98/160 (61.25%), Query Frame = 0 Query: 84 HKLQEGLTALPVRELVKTFRQAQEERVQAYNFFDQGLAQILSSRAFTEYDALCAEATAKFAVLSNLVNAVAECLGRDPYNRVVLARLLRRIQAEEKEKLSLTAALHLEKFRLATSTCSGAAGNENSDGREAMLLREGARRLETNIRHVVCRINDVLEEIR 243 ++++E L++L EL+K F +AQE+RV+ Y +DQGL +IL + EY +LC E TA F+VLS+ +N + + L + + +A L+ ++Q +E+ KL+LTAALHLE+ R+ + SD R LL EGA L + + V IN +++E+R Sbjct: 88 NEMEEKLSSLNKEELMKCFFEAQEQRVKTYRLYDQGLERILKTGQIHEYPSLCTETTATFSVLSDSINNIRKVL-LETLKQTSIADLIAQLQDKERTKLNLTAALHLERIRI--------QNQQASDDRITKLLVEGAASLRSQMGENVEEINGIMDELR 238
BLAST of EWM21500.1 vs. NCBI_GenBank
Match: gi|299116846|emb|CBN74958.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 97.4413 bits (241), Expect = 4.140e-20 Identity = 61/159 (38.36%), Postives = 89/159 (55.97%), Query Frame = 0 Query: 98 LVKTFRQAQEERVQAYNFFDQGLAQILSSRAFTEYDALCAEATAKFAVLSNLVNAVAECLGRDPYNRVVLARLLRRIQAEEKEKLSLTAALHLEKFRLATSTCSGAAGNENSDGR---------EAMLLREGARRLETNIRHVVCRINDVLEEIRYEEE 247 LV +FR+AQEERV Y F+ GL + L ++ Y ALC E TA F+VLS +NA+ LG+D + LA ++RR+Q E+EKL++TAA HLE R A + G + +S G+ + LL + L ++++LEE+RYE E Sbjct: 182 LVASFRRAQEERVALYRKFNGGLKEALRIGDYSGYPALCCEVTAGFSVLSKAINAIEATLGKDSETK-ALAGIIRRVQEHEREKLTVTAAHHLESMREARALGMGPGMSVHSGGQGDAGAASPSQDRLLSDAVGDLLRRAEGEAAAVSELLEELRYEAE 339
BLAST of EWM21500.1 vs. NCBI_GenBank
Match: gi|1072229994|gb|OEU14728.1| (hypothetical protein FRACYDRAFT_269653 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 95.5153 bits (236), Expect = 9.882e-20 Identity = 61/171 (35.67%), Postives = 89/171 (52.05%), Query Frame = 0 Query: 81 QSVHKLQEGLTALPVRELVKTFRQAQEERVQAYNFFDQGLAQILSSRAFTEYDALCAEATAKFAVLSNLVNAVAECLGRDPYNR--------VVLARLLRRIQAEEKEKLSLTAALHLEKFRLATSTCSGAAGNENSDGREAMLLREGARRLETNIRHVVCRINDVLEEIR 243 Q KL+E L LP+ + ++ + QE+RV+AY FDQ L +L SR T+Y C ATA F+VLS+ V A+ + + N+ + R + +Q+ E+EKL LTAA HLE C A+ + D RE LL G L + I IND+L+++R Sbjct: 107 QQQQKLRESLRDLPIVDFLRMVLKCQEDRVKAYIHFDQKLKTVLLSRKLTDYPPACLSATAAFSVLSDTVMAIRDEVSTRIENKNDTEKKFETSIVRSICELQSSEREKLQLTAAFHLE--------CLRASNLKQEDQRELQLLNSGQADLRSRIETCKTNINDILDDLR 269
BLAST of EWM21500.1 vs. NCBI_GenBank
Match: gi|695466707|ref|XP_009539461.1| (hypothetical protein PHYSODRAFT_320201 [Phytophthora sojae] >gi|348665257|gb|EGZ05089.1| hypothetical protein PHYSODRAFT_320201 [Phytophthora sojae]) HSP 1 Score: 93.2041 bits (230), Expect = 1.579e-19 Identity = 62/158 (39.24%), Postives = 84/158 (53.16%), Query Frame = 0 Query: 88 EGLTALPVRELVKTFRQAQEERVQAYNFFDQGLAQILSSRAFTEYDALCAEATAKFAVLSNLVNAVAECLGRDPYNRVVLARLLRRIQAEEKEKLSLTAALHLEKFRLATSTCSGAAGNENSDGREAMLLREGARRLETNIRHVVCRINDVLEEIRYE 245 E L L RELV+TF + QE RVQ Y F QG + FT + C+ T +F+ +S +N V E L RD +V +A+LLR++Q EEKEKL LT+A+ +EK RL S A D L + L V RIN++LE++R E Sbjct: 52 EDLALLSARELVQTFHRLQETRVQIYTEFRQGFQVHQKTEQFTSF---CSGITERFSAVSEKINRV-EKLLRDEKQQVAIAQLLRKVQLEEKEKLLLTSAVLIEKMRL-----SDATKQPEPDESTIAFLERSVQTLTAKHTDCVVRINEILEDLRAE 200
BLAST of EWM21500.1 vs. NCBI_GenBank
Match: gi|567953221|gb|ETK78878.1| (hypothetical protein L915_15191 [Phytophthora parasitica]) HSP 1 Score: 90.5077 bits (223), Expect = 1.146e-18 Identity = 81/245 (33.06%), Postives = 111/245 (45.31%), Query Frame = 0 Query: 1 MDFGKCSAILAGRKSCEVGTQRHHHSEEEVQEGYLLGQVIDLRPSAPSSESVHACEPPQETSTHPSNKEETILSVEAQAQQSVHKLQEGLTALPVRELVKTFRQAQEERVQAYNFFDQGLAQILSSRAFTEYDALCAEATAKFAVLSNLVNAVAECLGRDPYNRVVLARLLRRIQAEEKEKLSLTAALHLEKFRLATSTCSGAAGNENSDGREAMLLREGARRLETNIRHVVCRINDVLEEIRYE 245 M+F +C ++LA R + H H EEE HA + PQ+ + EET++S E E LT L RELV+TF QE RVQ Y F QG + F A C+ T +F+ +S +N V + L RD +V+ A +R+IQ EEKEKL LT+A+ +EK RL + A + D L L V RIN+VLE++R E Sbjct: 1 MEFQECFSLLASRPA-----HAHEHCEEEK----------------------HAEDKPQDVNA--VEHEETVVSEEL----------EDLTLLSTRELVRTFHGLQETRVQIYADFRQGFQVHQKTEQFP---AFCSGITERFSAVSERINQVEKYL-RDKKQQVI-ADFIRKIQLEEKEKLLLTSAVLIEKMRL-----TDALKQPDPDESTVAFLERSVETLNGKHTECVVRINEVLEDLRAE 196 The following BLAST results are available for this feature:
BLAST of EWM21500.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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