EWM21500.1, cds9232 (CDS) Nannochloropsis gaditana

Overview
NameEWM21500.1
Unique Namecds9232
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037252.1:231094..231843 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM21500.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100019g6.522.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037252.1supercontigKK037252.1:231094..231843 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
BLAST of EWM21500.1 vs. NCBI_GenBank
Match: gi|585101730|gb|EWM21500.1| (hypothetical protein Naga_100019g6 [Nannochloropsis gaditana])

HSP 1 Score: 506.523 bits (1303), Expect = 0.000e+0
Identity = 249/249 (100.00%), Postives = 249/249 (100.00%), Query Frame = 0
Query:    1 MDFGKCSAILAGRKSCEVGTQRHHHSEEEVQEGYLLGQVIDLRPSAPSSESVHACEPPQETSTHPSNKEETILSVEAQAQQSVHKLQEGLTALPVRELVKTFRQAQEERVQAYNFFDQGLAQILSSRAFTEYDALCAEATAKFAVLSNLVNAVAECLGRDPYNRVVLARLLRRIQAEEKEKLSLTAALHLEKFRLATSTCSGAAGNENSDGREAMLLREGARRLETNIRHVVCRINDVLEEIRYEEEEE 249
            MDFGKCSAILAGRKSCEVGTQRHHHSEEEVQEGYLLGQVIDLRPSAPSSESVHACEPPQETSTHPSNKEETILSVEAQAQQSVHKLQEGLTALPVRELVKTFRQAQEERVQAYNFFDQGLAQILSSRAFTEYDALCAEATAKFAVLSNLVNAVAECLGRDPYNRVVLARLLRRIQAEEKEKLSLTAALHLEKFRLATSTCSGAAGNENSDGREAMLLREGARRLETNIRHVVCRINDVLEEIRYEEEEE
Sbjct:    1 MDFGKCSAILAGRKSCEVGTQRHHHSEEEVQEGYLLGQVIDLRPSAPSSESVHACEPPQETSTHPSNKEETILSVEAQAQQSVHKLQEGLTALPVRELVKTFRQAQEERVQAYNFFDQGLAQILSSRAFTEYDALCAEATAKFAVLSNLVNAVAECLGRDPYNRVVLARLLRRIQAEEKEKLSLTAALHLEKFRLATSTCSGAAGNENSDGREAMLLREGARRLETNIRHVVCRINDVLEEIRYEEEEE 249          
BLAST of EWM21500.1 vs. NCBI_GenBank
Match: gi|553181310|ref|XP_005853542.1| (hypothetical protein NGA_2120020, partial [Nannochloropsis gaditana CCMP526] >gi|553194561|ref|XP_005855988.1| hypothetical protein NGA_2120010, partial [Nannochloropsis gaditana CCMP526] >gi|422293072|gb|EKU20373.1| hypothetical protein NGA_2120010, partial [Nannochloropsis gaditana CCMP526] >gi|422295519|gb|EKU22818.1| hypothetical protein NGA_2120020, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 501.516 bits (1290), Expect = 2.549e-179
Identity = 247/249 (99.20%), Postives = 248/249 (99.60%), Query Frame = 0
Query:    1 MDFGKCSAILAGRKSCEVGTQRHHHSEEEVQEGYLLGQVIDLRPSAPSSESVHACEPPQETSTHPSNKEETILSVEAQAQQSVHKLQEGLTALPVRELVKTFRQAQEERVQAYNFFDQGLAQILSSRAFTEYDALCAEATAKFAVLSNLVNAVAECLGRDPYNRVVLARLLRRIQAEEKEKLSLTAALHLEKFRLATSTCSGAAGNENSDGREAMLLREGARRLETNIRHVVCRINDVLEEIRYEEEEE 249
            MDFGKCSAILAGRKSCEVG+QRHHHSEEEVQEG LLGQVIDLRPSAPSSESVHACEPPQETSTHPSNKEETILSVEAQAQQSVHKLQEGLTALPVRELVKTFRQAQEERVQAYNFFDQGLAQILSSRAFTEYDALCAEATAKFAVLSNLVNAVAECLGRDPYNRVVLARLLRRIQAEEKEKLSLTAALHLEKFRLATSTCSGAAGNENSDGREAMLLREGARRLETNIRHVVCRINDVLEEIRYEEEEE
Sbjct:    6 MDFGKCSAILAGRKSCEVGSQRHHHSEEEVQEGCLLGQVIDLRPSAPSSESVHACEPPQETSTHPSNKEETILSVEAQAQQSVHKLQEGLTALPVRELVKTFRQAQEERVQAYNFFDQGLAQILSSRAFTEYDALCAEATAKFAVLSNLVNAVAECLGRDPYNRVVLARLLRRIQAEEKEKLSLTAALHLEKFRLATSTCSGAAGNENSDGREAMLLREGARRLETNIRHVVCRINDVLEEIRYEEEEE 254          
BLAST of EWM21500.1 vs. NCBI_GenBank
Match: gi|397574767|gb|EJK49372.1| (hypothetical protein THAOC_31760 [Thalassiosira oceanica])

HSP 1 Score: 134.035 bits (336), Expect = 1.384e-34
Identity = 80/222 (36.04%), Postives = 124/222 (55.86%), Query Frame = 0
Query:   36 LGQVIDLRPSAPSSESVHACEP--------------PQETSTHPSNKEETILSVEAQAQQSVHKLQEGLTALPVRELVKTFRQAQEERVQAYNFFDQGLAQILSSRAFTEYDALCAEATAKFAVLSNLVNAVAECLGRDPYNRVVLARLLRRIQAEEKEKLSLTAALHLEKFRLATSTCSGAAGNENSDGREAMLLREGARRLETNIRHVVCRINDVLEEIR 243
            +GQ ID+    PS+++  A  P              P    T   +      +++A  ++   +++E +  + V +L++   QAQ++RV AY  FD GL  +L+S   T Y ALCA+ATA F+VLS+ +N++  CL R+ + R   AR + ++Q +E EKL+LTAA HLE+ RL  +   G A +   D R A LLREG + L+  +  VV  IND +EE+R
Sbjct:   46 MGQTIDM--DQPSTDADRAGPPGPLGGVSAASLPADPAVPETMSDDDRRKHDAMKADRERRGKEIREHMRTMDVADLLRLVFQAQQDRVAAYKVFDSGLETVLASGNITSYPALCAKATATFSVLSDTINSIRSCL-REQHGRTDAARAVEQLQKKEGEKLNLTAAAHLERLRLRNAQVEGGARDNGEDERTAALLREGIKTLDGKVAKVVEEINDCIEELR 264          
BLAST of EWM21500.1 vs. NCBI_GenBank
Match: gi|223999303|ref|XP_002289324.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220974532|gb|EED92861.1| predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 115.546 bits (288), Expect = 1.648e-27
Identity = 66/158 (41.77%), Postives = 93/158 (58.86%), Query Frame = 0
Query:   86 LQEGLTALPVRELVKTFRQAQEERVQAYNFFDQGLAQILSSRAFTEYDALCAEATAKFAVLSNLVNAVAECLGRDPYNRVVLARLLRRIQAEEKEKLSLTAALHLEKFRLATSTCSGAAGNENSDGREAMLLREGARRLETNIRHVVCRINDVLEEIR 243
            +Q  L ++ V +L+     AQ+ERV  Y  FD+GL+ IL S   T Y ALCA+ TA F+VLS+ +N V   L  D + R  +  ++ ++Q  E EKL+LTAALHLE+ RL  S      G ++S      LL+ G + LE+ I   V  IN+VLEE+R
Sbjct:  111 IQSTLQSMNVSDLLGMIFGAQQERVTTYKLFDEGLSTILCSGNITTYPALCAKVTASFSVLSDTINGVKSSL-VDNHERTDIGGVISQLQKHESEKLNLTAALHLERLRLKNSEL--GVGTDDSGENTLRLLKGGIQSLESKIATAVESINEVLEELR 265          
BLAST of EWM21500.1 vs. NCBI_GenBank
Match: gi|1210531612|dbj|GAX09968.1| (hypothetical protein FisN_11Lh043 [Fistulifera solaris])

HSP 1 Score: 109.768 bits (273), Expect = 1.977e-25
Identity = 62/160 (38.75%), Postives = 98/160 (61.25%), Query Frame = 0
Query:   84 HKLQEGLTALPVRELVKTFRQAQEERVQAYNFFDQGLAQILSSRAFTEYDALCAEATAKFAVLSNLVNAVAECLGRDPYNRVVLARLLRRIQAEEKEKLSLTAALHLEKFRLATSTCSGAAGNENSDGREAMLLREGARRLETNIRHVVCRINDVLEEIR 243
            ++++E L +L   EL+K F +AQE+RVQ Y  +DQGL +IL +    EY +LC E TA F+VLS+ +N + + L  +   +  +A L+ ++Q +E+ KL+LTAALHLE+ R+           + SD R   LL EGA  L   +R  +  IN++++E+R
Sbjct:   92 NEMEEKLGSLNKEELIKCFFEAQEQRVQTYRLYDQGLDRILETGQIHEYPSLCTETTATFSVLSDSINNIRKVL-LEKLEQTSVAELITQLQDKERTKLNLTAALHLERIRI--------HNQQASDDRITKLLMEGAASLRAQMRENIEEINEIMDELR 242          
BLAST of EWM21500.1 vs. NCBI_GenBank
Match: gi|1210526848|dbj|GAX14496.1| (hypothetical protein FisN_11Hh043 [Fistulifera solaris])

HSP 1 Score: 105.531 bits (262), Expect = 6.221e-24
Identity = 61/160 (38.12%), Postives = 98/160 (61.25%), Query Frame = 0
Query:   84 HKLQEGLTALPVRELVKTFRQAQEERVQAYNFFDQGLAQILSSRAFTEYDALCAEATAKFAVLSNLVNAVAECLGRDPYNRVVLARLLRRIQAEEKEKLSLTAALHLEKFRLATSTCSGAAGNENSDGREAMLLREGARRLETNIRHVVCRINDVLEEIR 243
            ++++E L++L   EL+K F +AQE+RV+ Y  +DQGL +IL +    EY +LC E TA F+VLS+ +N + + L  +   +  +A L+ ++Q +E+ KL+LTAALHLE+ R+           + SD R   LL EGA  L + +   V  IN +++E+R
Sbjct:   88 NEMEEKLSSLNKEELMKCFFEAQEQRVKTYRLYDQGLERILKTGQIHEYPSLCTETTATFSVLSDSINNIRKVL-LETLKQTSIADLIAQLQDKERTKLNLTAALHLERIRI--------QNQQASDDRITKLLVEGAASLRSQMGENVEEINGIMDELR 238          
BLAST of EWM21500.1 vs. NCBI_GenBank
Match: gi|299116846|emb|CBN74958.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 97.4413 bits (241), Expect = 4.140e-20
Identity = 61/159 (38.36%), Postives = 89/159 (55.97%), Query Frame = 0
Query:   98 LVKTFRQAQEERVQAYNFFDQGLAQILSSRAFTEYDALCAEATAKFAVLSNLVNAVAECLGRDPYNRVVLARLLRRIQAEEKEKLSLTAALHLEKFRLATSTCSGAAGNENSDGR---------EAMLLREGARRLETNIRHVVCRINDVLEEIRYEEE 247
            LV +FR+AQEERV  Y  F+ GL + L    ++ Y ALC E TA F+VLS  +NA+   LG+D   +  LA ++RR+Q  E+EKL++TAA HLE  R A +   G   + +S G+         +  LL +    L          ++++LEE+RYE E
Sbjct:  182 LVASFRRAQEERVALYRKFNGGLKEALRIGDYSGYPALCCEVTAGFSVLSKAINAIEATLGKDSETK-ALAGIIRRVQEHEREKLTVTAAHHLESMREARALGMGPGMSVHSGGQGDAGAASPSQDRLLSDAVGDLLRRAEGEAAAVSELLEELRYEAE 339          
BLAST of EWM21500.1 vs. NCBI_GenBank
Match: gi|1072229994|gb|OEU14728.1| (hypothetical protein FRACYDRAFT_269653 [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 95.5153 bits (236), Expect = 9.882e-20
Identity = 61/171 (35.67%), Postives = 89/171 (52.05%), Query Frame = 0
Query:   81 QSVHKLQEGLTALPVRELVKTFRQAQEERVQAYNFFDQGLAQILSSRAFTEYDALCAEATAKFAVLSNLVNAVAECLGRDPYNR--------VVLARLLRRIQAEEKEKLSLTAALHLEKFRLATSTCSGAAGNENSDGREAMLLREGARRLETNIRHVVCRINDVLEEIR 243
            Q   KL+E L  LP+ + ++   + QE+RV+AY  FDQ L  +L SR  T+Y   C  ATA F+VLS+ V A+ + +     N+          + R +  +Q+ E+EKL LTAA HLE        C  A+  +  D RE  LL  G   L + I      IND+L+++R
Sbjct:  107 QQQQKLRESLRDLPIVDFLRMVLKCQEDRVKAYIHFDQKLKTVLLSRKLTDYPPACLSATAAFSVLSDTVMAIRDEVSTRIENKNDTEKKFETSIVRSICELQSSEREKLQLTAAFHLE--------CLRASNLKQEDQRELQLLNSGQADLRSRIETCKTNINDILDDLR 269          
BLAST of EWM21500.1 vs. NCBI_GenBank
Match: gi|695466707|ref|XP_009539461.1| (hypothetical protein PHYSODRAFT_320201 [Phytophthora sojae] >gi|348665257|gb|EGZ05089.1| hypothetical protein PHYSODRAFT_320201 [Phytophthora sojae])

HSP 1 Score: 93.2041 bits (230), Expect = 1.579e-19
Identity = 62/158 (39.24%), Postives = 84/158 (53.16%), Query Frame = 0
Query:   88 EGLTALPVRELVKTFRQAQEERVQAYNFFDQGLAQILSSRAFTEYDALCAEATAKFAVLSNLVNAVAECLGRDPYNRVVLARLLRRIQAEEKEKLSLTAALHLEKFRLATSTCSGAAGNENSDGREAMLLREGARRLETNIRHVVCRINDVLEEIRYE 245
            E L  L  RELV+TF + QE RVQ Y  F QG      +  FT +   C+  T +F+ +S  +N V E L RD   +V +A+LLR++Q EEKEKL LT+A+ +EK RL     S A      D      L    + L       V RIN++LE++R E
Sbjct:   52 EDLALLSARELVQTFHRLQETRVQIYTEFRQGFQVHQKTEQFTSF---CSGITERFSAVSEKINRV-EKLLRDEKQQVAIAQLLRKVQLEEKEKLLLTSAVLIEKMRL-----SDATKQPEPDESTIAFLERSVQTLTAKHTDCVVRINEILEDLRAE 200          
BLAST of EWM21500.1 vs. NCBI_GenBank
Match: gi|567953221|gb|ETK78878.1| (hypothetical protein L915_15191 [Phytophthora parasitica])

HSP 1 Score: 90.5077 bits (223), Expect = 1.146e-18
Identity = 81/245 (33.06%), Postives = 111/245 (45.31%), Query Frame = 0
Query:    1 MDFGKCSAILAGRKSCEVGTQRHHHSEEEVQEGYLLGQVIDLRPSAPSSESVHACEPPQETSTHPSNKEETILSVEAQAQQSVHKLQEGLTALPVRELVKTFRQAQEERVQAYNFFDQGLAQILSSRAFTEYDALCAEATAKFAVLSNLVNAVAECLGRDPYNRVVLARLLRRIQAEEKEKLSLTAALHLEKFRLATSTCSGAAGNENSDGREAMLLREGARRLETNIRHVVCRINDVLEEIRYE 245
            M+F +C ++LA R +       H H EEE                       HA + PQ+ +      EET++S E           E LT L  RELV+TF   QE RVQ Y  F QG      +  F    A C+  T +F+ +S  +N V + L RD   +V+ A  +R+IQ EEKEKL LT+A+ +EK RL     + A    + D      L      L       V RIN+VLE++R E
Sbjct:    1 MEFQECFSLLASRPA-----HAHEHCEEEK----------------------HAEDKPQDVNA--VEHEETVVSEEL----------EDLTLLSTRELVRTFHGLQETRVQIYADFRQGFQVHQKTEQFP---AFCSGITERFSAVSERINQVEKYL-RDKKQQVI-ADFIRKIQLEEKEKLLLTSAVLIEKMRL-----TDALKQPDPDESTVAFLERSVETLNGKHTECVVRINEVLEDLRAE 196          
The following BLAST results are available for this feature:
BLAST of EWM21500.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585101730|gb|EWM21500.1|0.000e+0100.00hypothetical protein Naga_100019g6 [Nannochloropsi... [more]
gi|553181310|ref|XP_005853542.1|2.549e-17999.20hypothetical protein NGA_2120020, partial [Nannoch... [more]
gi|397574767|gb|EJK49372.1|1.384e-3436.04hypothetical protein THAOC_31760 [Thalassiosira oc... [more]
gi|223999303|ref|XP_002289324.1|1.648e-2741.77predicted protein [Thalassiosira pseudonana CCMP13... [more]
gi|1210531612|dbj|GAX09968.1|1.977e-2538.75hypothetical protein FisN_11Lh043 [Fistulifera sol... [more]
gi|1210526848|dbj|GAX14496.1|6.221e-2438.13hypothetical protein FisN_11Hh043 [Fistulifera sol... [more]
gi|299116846|emb|CBN74958.1|4.140e-2038.36conserved unknown protein [Ectocarpus siliculosus][more]
gi|1072229994|gb|OEU14728.1|9.882e-2035.67hypothetical protein FRACYDRAFT_269653 [Fragilario... [more]
gi|695466707|ref|XP_009539461.1|1.579e-1939.24hypothetical protein PHYSODRAFT_320201 [Phytophtho... [more]
gi|567953221|gb|ETK78878.1|1.146e-1833.06hypothetical protein L915_15191 [Phytophthora para... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9262rna9262Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications