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Properties
Property Name | Value |
Product | Cytochrome b561/ferric reductase transmembrane |
Orig transcript id | gnl|cribi|Naga_100019g20.501.mrna |
Orig protein id | gnl|cribi|Naga_100019g20.501 |
Gbkey | mRNA |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
KK037252.1 | supercontig | KK037252.1:203050..204900 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna9250 ID=rna9250|Name=rna9250|organism=Nannochloropsis gaditana|type=mRNA|length=3956bp AAGTCTGGGACAACACCTTTTGAGTAAAACTGTGCGTTGCAAGTCTGCTG CAGATATCACTTCATTTAAATTAGACTGTTGATGATATGAGCTGTGCATG AGATTTGGTGGATCTGTCTTTGCTGAAAGCCAGTGCCTTTTTTTCGGTCT AGCCCTCAGGCTTTGCCCCTGCTGGTATCTCGGGACAATATTCACTTATA TGCCGCCCGGCCAGTCCTATTGGCAGGGCAATCTCACAACTCTCTCCTTT CAATCGCGCCATGTGAGAAAGACCACCAGGAAAACCACAGTTATAACTTT CCGTCAGTAGGTACTGGTCGTGTAGCGGAGTGGAACGTTTGTCATGGCCT TTTTTCCCGCGTGTAAAAATGTCCTGTCAAGAAGATGATCCGGGTGAAGG AGACGGGACTTGACGTATGCCTTTTCGTGAATGCTGGCACTTCTTCACGC GCGGTACTACTCCATTTCATATGTCCTTAGATGAGGCATGAAACTTCAAC TGTGTCTCACCAGGCGACCAAATTCGCGGGTGGCTGTCATATTCACTGTT GTCTCACTCAACATATTTATCTCCTTCAGCACCTCCGTGTCACAGGCGCA GTGCAGGCGCATGGCAACCGAGGCCAACGGTGGACCAGTGGATCACCACC GACGGCGGGACGATGACACAGAGCAACAAATGCACCAGCAGAGCAACGAG CAGGCCCCTGGAGCCCATCAGTTCTCAGAAGTCTCGGCAGCCGGCCGGGC TGAGGCTTTCCCTTCCATGCAAGAGGAATTGGTGGAAGGTCGTCCGCTCA GCATGAAACGAGTGCGATCAAGTCAGAGCTGCACATTGGAAGGGCTTTTC TTGGCCCAGGCACCGCCTCCTGATTGCCCACCGTACTTGGACGGCAGGCA GCTGCCTCTGTGGGTAGGCCGGAGCCCCCTGGAGCTCACCCCCGAGAAAG CAGATGAGCTGCACAACATTCAATGGCGGGCCTGGAAGGAGGAGCTGTGT AGCGAGTCCCGCGAGCAAAATGTGGTCGGCATGGAGAGTAGCCTCGGCCG TGAGAAGGGCGGAGCCCACGGCGCAGCAGGGAAGGACTACGCGCGGATCC TGGAGGCCGCCGGCTCGATCTTCAACTCTGCCTTCCTGAAGCTCAATCCC CACAACTTCTCCATCACGGTAGGGATCACCGTGGACGCGATGTACCATAC CAAGGCCCCGCTGCTGGCCTGTGCCAATACCTTCCTCTACGGCCTCAGCC TCCTGGCCGACAACCCCTCCAAACAGACGATCCCCATCCAATTCTGTCCC GCCGCCCCCCTCTTCATGGAGGTGTGGGCCCAAGAGACCTTCGGGACTGG GGGCGGAGGGGAGGCCGTGGAGTCCCTCTTCCAGTTCTGCGGGGTCTACC CCCACACGGGCCTGCCGGAGGTGCTGAGCCGGCAGGTGGAGCGTCGCGTC GGGGAGCTGATGGTGGGGACGAGGTACAAGGAAGCGGTGACCTTAATCTC GCGGTTGCTGGAGGCGCCCTGGGCGCAAGGGCACAAGATATGGGAGGAAG ATGTCTACTGGAAACTACGCCTGCTCTCCTACACGTGCAAGCGGCGGGCC CGGCACCTCGCCTCGGGGAGCCCCCGCTTCTCGTCCGCTTCCTCCTCCTC CCCCAAGCGCGGGCCGGCAGCCACCTCGAAGGGCACAACCGGCGGTCGAG CGAGGCAAAACGAGACGACACCGACGGTGGTAAGGGTGGTCGTGCTCGTC TTCCCCTCCTCCTCCGGCCGCCTCCCCCGCGAGCTCGAGGAGGGGGAGGC TTCGGGCACCTACGAGGCGGGCTGTTCCTTCGAGCCTGAGGAGCTGGAGG CGTCCTTGACGGCGATGGAGGCGGCCTTTGAAGAGTTCTCCGAGTCCTTC CTGGCCCTGTCTAAGGAGACGGTGAAGTGGGAGCTAGTCCTGGACCGGGC ACAGTGCGTGCTGAGGGGGGCCTGTATGCCCGCCCGCCGCTACCACCGCG AGGTGGAGGCCTCCACGAACCCGAACCGGCTCGTGGCTCAGGCAGATTTC GCAGCCTGCCCCAACTTCCGCAAACACTTGGCCGTGGCAAGCGAAACGGA CGAAAGAGTGCGGGAAGCTCAAGCCGTCCTGGTGGTGTGGCCCGGATTGA AGGCGCCGCCGGCCGCCTACATGCTGACCTGCGGGGGAATCACGGCCTCG GGGGGAGACGCGGCCGGGGGCCGGGCGGTCTTCATGTCGGACGGGCCCAT GCTAAAGGGGCGGCCGGTCTGGTCGCCCATGTGGTTCTGGCACGAGGTTT TTCACATCATGGAGCACATATTCCCCGAGGCTCCCTTCGCGGAAGCCTCC GCCTCCATCGGCCACCCCTGCTTCCTCCGAGACCAGTGGCCAGATCACTA TGACGGCCCGGGCTATGAATGGGACTACTACTACCACAGCTATCGCCAGC ACATTTTGCACGGGAGCGCCCAACCCCCCCTTGCGGCCCGGCTGGCCAAC CTGTCCCACCTGCCCCGCACCCGCTGCTTCGACATCTCCCGGCGGGACAC GGCCACGATCATCGCGCGGCTTGCCCACCCGGGGGATCGGATCATTTTGC GGGGGGGTACGTGCGAGATGAGCGCGAGCAGCGGGGCTTTGGCCTTCAAG CCGGGCGCCGTGCTCCCAGGACTCACCTACGTGAGCGCAATCAACGAGGG ACGGGCGGTCGCGCCGGGGCGGGAAGAGGCCAAGATGGCGAGTAACGAGG AGGAGATCAAGAAGGAGGAGGAGGAGGAGCGGGCCTTCATGGCCTTCTGG GTGAGCGAGCCTCCCTGTTTCGTCGTCACAATGGTCCAAGGGGGGGACAG GGCGGCGCACGAGGCGCTGCTCGATAAGTTATTGGCGGACAAACCCAGCA GCAAGAGCTACTCCCCTCGACAGGCGAGGCAGGGGCTCGACGGTTCCCCC CTCGCCTCCTCGCCCACGGCGAAGGAGACCCCGTGCATGGGCCCGGGGGG CGGCTTTTCTGGCCCTGGTCGAGGGGCCTCGGAGCACGCTCTCCACCACT CCCCTGGTCGCATATGCGCAGCAGAAGCTGCAAGCGTGCACGGAGCAAGG CATCTGCACCTTTCGGGCCACGGGTACCAGCTGGATGCGGCAGGCGTACA TGGTGTGCCGGACCTGTGAGAAGTACAGCGTGCTCCAGGGCAATGTAGGT TGTTGCATGCCCTGCTCCCAGATCTGCCATAAGGACCACGACCTGGTGCA GAAGGAGGAGGGACCCTTCTACTGCGACTGTGCAATCGGCGGCTTCTCGA ATATGAAGTGCCACTGTGTTGGGCTGGAGCACGAGACGATGCGGCACGGG GGGGGGCGCGGGCATGTGGGAGGCGTCTTTCCGATGGATACGAGCACGGA AATTCCGGGCGAAGACGGACGAGTTTATCCAGGACATCATGACAACAGCA AGCAGGGAGAAGAACTTCGATGTCTCAACGGTTTGCATGCATGAGGGGGG CGGGCGCAGGAAAATATCGACACACAAGGACCACTCTCTCTGGTTTCTTG AAGAGGACGGTAGGACATGTGTTTGAGCTACAATTTGTGCAAAGCATCAG AAAAACTTATCCCCGGTGTTCAAAGAGGTTATACCTGAAATGGGATGCGT GTGAGTGGTGGGGCCCAGTATTGGGGGCACGCGGGAGTTGTTTGGGCCCC CGCATGGGCCATGTCGGGGGGTGAGCGTTCCTGTAGGATGATTTTTAATC GCTTCTTTTGTAGACGTAGAAGGACGCGCTGGAATTTTACTCATGTTCCA AATCGATTTGTGCTGCCTGCTCGCCAGCCAGCATTGCAAAATAAAAAAAA ATGAACCAAACGTCGTATATTGACCTCAACCCTTGCCCGCCACGGTGCCG AGGAGCAGCTAATGACCGCCAGGGCCACTTTCGCAAGACAAACGGTGTTA AAAAAC back to topprotein sequence of rna9250 >rna9250-protein ID=rna9250-protein|Name=rna9250|organism=Nannochloropsis gaditana|type=polypeptide|length=215bp MGEAAVGAHGIIMIVAFLFMTQLAEAIAWWASNKTNMRTNYFKVIEHGSR LWNAHRGLNTLAFILGLVGMIIILSAEEFKEAMGSKERHVIYGFSMIVAL FVHILFRVAYPDDKTKWVHRWFGRAINLWAFFVTFTGYELANYGSNEGTD AGGEDFDNIVIIFCFWVILKFGIWVFYLILRRRGKAQKYDSVGAAEGIQL PTTNAIEVGSPPASL back to topmRNA from alignment at KK037252.1:203050..204900- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna9250 ID=rna9250|Name=rna9250|organism=Nannochloropsis gaditana|type=mRNA|length=1851bp|location=Sequence derived from alignment at KK037252.1:203050..204900- (Nannochloropsis gaditana) ATTGTGCAAATGTGCAAGTTACATAAAAAAATAAGTCTTTGGTTCGAATG
CAACCATGAGTCAATTGTAGGTGCTTTTGTATGATTTCTTGAGCACACTA
ACAGAACACGCATGCCATATCTCGCACAGACCACGAAGACAAAGAAATCT
TGTGAGGATGGGAGAAGCTGCTGTTGGTGCACACGGTATCATTATGATCG
TCGCGTTCCTCTTCATGACACAACTAGCTGAGGCGATAGCATGGTGGGCA
TCCAACAAGGTGGGTCGAGAGTTCCGTGGTGCAGCAGAAAGCGAAGCGGG
TATGGGGGGGAAGTGGCGGAATAAACATTTAGACATGACTAGGTTGCGAA
GGAAGGATAAAGTGAAGATAGGCTTTGTTCAGCACAGGCTTCGAGCCAAG
GCGACCATGGGCTCGTTCTATCCCGCGGTCTCCTAGTACCAGGCATTTCC
TCCTTCTGCCACCTGTCGGTCTACGTGCTCGTGCTCTTATCCCTCCTACT
CTCATTGTGATTTTTTTGCTTTTAACACTCTCTGTCAGACAAATATGCGG
ACCAACTACTTTAAAGTCATCGAGCATGGATCCAGACTTTGGAACGCCCA
CAGAGGTCTGAACACGCTGGCCTTCATCCTAGGCCTTGTTGGAATGATCA
TAATTTTGAGCGCCGAAGAGTTCAAAGAGGCGATGGGCTCCAAGGAGAGG
CACGTCATTTACGGATTCTCGATGATAGTTGCCCTGTTCGTGCACATCCT
CTTTCGAGTGGCGTATCCGGATGTAAGTTTCAAGCCCACGAGGAATCATC
GAATGTCTTTCGTCCCATTCATCCACTTTTTATCAACCGACATGAAAATT
TATTCCCTTTTCGGCTGCAGGACAAAACAAAGTGGGTACACCGGTGGTTC
GGGCGTGCTATCAACCTGTGGGCGTTCTTCGTGACCTTTACCGGGTACGA
GCTCGCCAATTACGGTTCAAACGAAGGAACCGATGCTGGAGGAGAAGATT
TTGACAACATTGTTATCATTTTTTGCTTCTGGGTCATCTTGAAGTTCGGG
TATGTGCGAAAATCTTACATTTTAACTTTCCTTGTTCTCTACATTTTTTT
AAAAAAAACACAATAGTTTCTTGAGCCACGATTTGATTGGATCTTGAAAT
CCTTTCTCCACTTGTGCCCTTTCATATGTCTTGCTTTTTGCACGACGAAA
AAGATATCTTCCCAACACTGCTCACATGTCCATTTCAAACAGCATATGGG
TCTTCTACCTGATTCTTCGTAGGCGCGGCAAGGTAATTACACTGGCAAGG
ATAATATTATCTTGAAGAAAAGCTGAACCATACAATTTATCCACGTGTTG
TGAGCTCACTCATTACTCTTCCCCCTTTCTTCCAATCTCAACCTTCCTTT
CTGCCGCACGTTACAGGCACAAAAATACGACAGCGTTGGCGCGGCTGAAG
GAATTCAACTTCCTACTACCAATGCGATTGAGGTTGGCTCTCCACCGGCT
TCTCTGTAACAGACAAGCTGCCATCCACTTTCGTTTTCTGTGCGCACAAG
TGCCCTTGTTTGGGATGAAAAGCAACCCGAAAGCATTTGATATGGCTTTA
AGAAGTCTGTTTTTATGTTGACCTGGAAAGGACATGAAGAAAAGAGCAAG
ATCGCGTGCGTTCATTGCTTTTTGAACACATTTGAAGTTATAAATATGGA
ACAATTAAGTAATTCTACCCTCACCGATGTGTGGGGGCTGGAAAAAAACG
GCGACAGGATGCTGCTACCAACGGAAAGCGCCGTCGTCGGATCGAACACT
GACTTTTCGAGGGGGAAAATAAAGCAACGTAGAGTACGAAACTTCAAGCC
T back to topCoding sequence (CDS) from alignment at KK037252.1:203050..204900- >rna9250 ID=rna9250|Name=rna9250|organism=Nannochloropsis gaditana|type=CDS|length=3240bp|location=Sequence derived from alignment at KK037252.1:203050..204900- (Nannochloropsis gaditana) GCACAAAAATACGACAGCGTTGGCGCGGCTGAAGGAATTCAACTTCCTAC TACCAATGCGATTGAGGTTGGCTCTCCACCGGCTTCTCTGTAACATATGG GTCTTCTACCTGATTCTTCGTAGGCGCGGCAAGGACAAAACAAAGTGGGT ACACCGGTGGTTCGGGCGTGCTATCAACCTGTGGGCGTTCTTCGTGACCT TTACCGGGTACGAGCTCGCCAATTACGGTTCAAACGAAGGAACCGATGCT GGAGGAGAAGATTTTGACAACATTGTTATCATTTTTTGCTTCTGGGTCAT CTTGAAGTTCGGACAAATATGCGGACCAACTACTTTAAAGTCATCGAGCA TGGATCCAGACTTTGGAACGCCCACAGAGGTCTGAACACGCTGGCCTTCA TCCTAGGCCTTGTTGGAATGATCATAATTTTGAGCGCCGAAGAGTTCAAA GAGGCGATGGGCTCCAAGGAGAGGCACGTCATTTACGGATTCTCGATGAT AGTTGCCCTGTTCGTGCACATCCTCTTTCGAGTGGCGTATCCGGATATGG GAGAAGCTGCTGTTGGTGCACACGGTATCATTATGATCGTCGCGTTCCTC TTCATGACACAACTAGCTGAGGCGATAGCATGGTGGGCATCCAACAAGGC ACAAAAATACGACAGCGTTGGCGCGGCTGAAGGAATTCAACTTCCTACTA CCAATGCGATTGAGGTTGGCTCTCCACCGGCTTCTCTGTAACATATGGGT CTTCTACCTGATTCTTCGTAGGCGCGGCAAGGACAAAACAAAGTGGGTAC ACCGGTGGTTCGGGCGTGCTATCAACCTGTGGGCGTTCTTCGTGACCTTT ACCGGGTACGAGCTCGCCAATTACGGTTCAAACGAAGGAACCGATGCTGG AGGAGAAGATTTTGACAACATTGTTATCATTTTTTGCTTCTGGGTCATCT TGAAGTTCGGACAAATATGCGGACCAACTACTTTAAAGTCATCGAGCATG GATCCAGACTTTGGAACGCCCACAGAGGTCTGAACACGCTGGCCTTCATC CTAGGCCTTGTTGGAATGATCATAATTTTGAGCGCCGAAGAGTTCAAAGA GGCGATGGGCTCCAAGGAGAGGCACGTCATTTACGGATTCTCGATGATAG TTGCCCTGTTCGTGCACATCCTCTTTCGAGTGGCGTATCCGGATATGGGA GAAGCTGCTGTTGGTGCACACGGTATCATTATGATCGTCGCGTTCCTCTT CATGACACAACTAGCTGAGGCGATAGCATGGTGGGCATCCAACAAGGCAC AAAAATACGACAGCGTTGGCGCGGCTGAAGGAATTCAACTTCCTACTACC AATGCGATTGAGGTTGGCTCTCCACCGGCTTCTCTGTAACATATGGGTCT TCTACCTGATTCTTCGTAGGCGCGGCAAGGACAAAACAAAGTGGGTACAC CGGTGGTTCGGGCGTGCTATCAACCTGTGGGCGTTCTTCGTGACCTTTAC CGGGTACGAGCTCGCCAATTACGGTTCAAACGAAGGAACCGATGCTGGAG GAGAAGATTTTGACAACATTGTTATCATTTTTTGCTTCTGGGTCATCTTG AAGTTCGGACAAATATGCGGACCAACTACTTTAAAGTCATCGAGCATGGA TCCAGACTTTGGAACGCCCACAGAGGTCTGAACACGCTGGCCTTCATCCT AGGCCTTGTTGGAATGATCATAATTTTGAGCGCCGAAGAGTTCAAAGAGG CGATGGGCTCCAAGGAGAGGCACGTCATTTACGGATTCTCGATGATAGTT GCCCTGTTCGTGCACATCCTCTTTCGAGTGGCGTATCCGGATATGGGAGA AGCTGCTGTTGGTGCACACGGTATCATTATGATCGTCGCGTTCCTCTTCA TGACACAACTAGCTGAGGCGATAGCATGGTGGGCATCCAACAAGGCACAA AAATACGACAGCGTTGGCGCGGCTGAAGGAATTCAACTTCCTACTACCAA TGCGATTGAGGTTGGCTCTCCACCGGCTTCTCTGTAACATATGGGTCTTC TACCTGATTCTTCGTAGGCGCGGCAAGGACAAAACAAAGTGGGTACACCG GTGGTTCGGGCGTGCTATCAACCTGTGGGCGTTCTTCGTGACCTTTACCG GGTACGAGCTCGCCAATTACGGTTCAAACGAAGGAACCGATGCTGGAGGA GAAGATTTTGACAACATTGTTATCATTTTTTGCTTCTGGGTCATCTTGAA GTTCGGACAAATATGCGGACCAACTACTTTAAAGTCATCGAGCATGGATC CAGACTTTGGAACGCCCACAGAGGTCTGAACACGCTGGCCTTCATCCTAG GCCTTGTTGGAATGATCATAATTTTGAGCGCCGAAGAGTTCAAAGAGGCG ATGGGCTCCAAGGAGAGGCACGTCATTTACGGATTCTCGATGATAGTTGC CCTGTTCGTGCACATCCTCTTTCGAGTGGCGTATCCGGATATGGGAGAAG CTGCTGTTGGTGCACACGGTATCATTATGATCGTCGCGTTCCTCTTCATG ACACAACTAGCTGAGGCGATAGCATGGTGGGCATCCAACAAGGCACAAAA ATACGACAGCGTTGGCGCGGCTGAAGGAATTCAACTTCCTACTACCAATG CGATTGAGGTTGGCTCTCCACCGGCTTCTCTGTAACATATGGGTCTTCTA CCTGATTCTTCGTAGGCGCGGCAAGGACAAAACAAAGTGGGTACACCGGT GGTTCGGGCGTGCTATCAACCTGTGGGCGTTCTTCGTGACCTTTACCGGG TACGAGCTCGCCAATTACGGTTCAAACGAAGGAACCGATGCTGGAGGAGA AGATTTTGACAACATTGTTATCATTTTTTGCTTCTGGGTCATCTTGAAGT TCGGACAAATATGCGGACCAACTACTTTAAAGTCATCGAGCATGGATCCA GACTTTGGAACGCCCACAGAGGTCTGAACACGCTGGCCTTCATCCTAGGC CTTGTTGGAATGATCATAATTTTGAGCGCCGAAGAGTTCAAAGAGGCGAT GGGCTCCAAGGAGAGGCACGTCATTTACGGATTCTCGATGATAGTTGCCC TGTTCGTGCACATCCTCTTTCGAGTGGCGTATCCGGATATGGGAGAAGCT GCTGTTGGTGCACACGGTATCATTATGATCGTCGCGTTCCTCTTCATGAC ACAACTAGCTGAGGCGATAGCATGGTGGGCATCCAACAAG back to top
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