|
|
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100022g38.875.mrna |
| Orig protein id | gnl|cribi|Naga_100022g38.875 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002456.1 | supercontig | CM002456.1:739547..740514 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna925 ID=rna925|Name=rna925|organism=Nannochloropsis gaditana|type=mRNA|length=462bp
ATGATAGAGGGTAAAGAATTCGACGTTAATGAAGCCGGAGCGGGGGACAG
AAGACCGCTTCATCGCGCTGCAGGAAGTAATCATATTGAGGTGTGCCGGT
ACCTTATCGAGAGGGGGGCCAAAATTGATCAGGCAGATAAAAGTGGACGC
ACAGCGTTACATTGGGCCAGCATTAGCGGACACCAGGAAACGGCTGAGCT
TCTTGTAGAGAGAGGTGCGAATCTCATGGCTGAAACTTCTTCTAAAATGA
CCCCCCTACACGGGGCCGCCGAGGGTGGAAGGGCGGAGCTCATTCGGCTC
TTCCTCACGAAGGGTGACAAGGACGCCCTTGTGAATGCTCGCGATGCTGA
CAACAAGACACCTTTCGATCTGGCCATGCAGGGCAAACACGCTGCGGTTG
TCAAAGCTCTGAAGGAAATGGGTGATCCCAATGCACAGGGAGCAGCATGT
TGCGTGATGTAA back to topprotein sequence of rna925 >rna925-protein ID=rna925-protein|Name=rna925|organism=Nannochloropsis gaditana|type=polypeptide|length=104bp
MMMMMMMVAAPGAGKNAATLSTRNRNRITVVLVTLGITMAALLPYGIRKL
RDGRSLYQSDKPLTGSQIMRGAYMNSSSQDIGPDPDYDFRSGEWHGRRND
PTKK back to topmRNA from alignment at CM002456.1:739547..740514- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna925 ID=rna925|Name=rna925|organism=Nannochloropsis gaditana|type=mRNA|length=968bp|location=Sequence derived from alignment at CM002456.1:739547..740514- (Nannochloropsis gaditana)
GATGTTCACAGAATGTAGGAATATGGCCATTTCACGAGGCCTGTAGTGTC
GTACAAACCTGCTGTGTTTATCCCGCTATTCTTTCAAAGACTTGCAGTCA
GCTTGACCTTGTTTTGTTGTTCAAGATCCATGCATGTCCAAGCCCGCCAC
GTCCCTGCAGCCTTGCTTGCAGGAGGTTGATAACATGATTCTGGGCACTG
GGCTCGCATCTACGGATCTCAGAGACCTGCTACTGTAACATACGTTTCGA
CAGACAATCAAAACATTTGAAGATCAATTTCTGCAATCAAAGGGACAATT
TTTCCCGGCTGAGGTGGGAAAGGGCTAAGAAATCCTGTAACGACCATGAT
GATGATGATGATGATGGTTGCCGCCCCGGGTGCCGGCAAAAATGCAGCAA
CACTATCCACACGCAATCGAAACCGCATTACTGTAGTACTGGTAACATTG
GGTATAACAATGGGTAAGTGAGCTGCGGTAAACGTGTAATACTGGTTGTT
AAGCCTGTCATCCGCATGCTTACTGCGGCACAGCATTTCATATCGCATTG
GTATGTCTTTCCCTCACACGTCTTCTTTTTTTCGGAAAGAGCAGCATTAG
TATAACATATTTCATTTCAAATACTTTCGTGCACCGAATCACAGCGGCTC
TTCTGCCCTACGGTATCCGCAAACTCCGCGATGGACGGTCCTTGTACCAG
AGCGACAAGCCCCTTACCGGGAGCCAGATCATGCGGGGGGCCTACATGAA
CTCTTCCAGCCAAGACATTGGACCTGACCCGGACTACGATTTTCGATCAG
GAGAGTGGCATGGCAGACGAAACGATCCTACCAAGAAGTAGTCAAGGACG
ATGCCGGGGATCCTGGAGAAGGATTGCTATAAAGCCTCCGCGCCAAATCC
AGTCCTTGTAAATGCCTGTGTGTGGATAAGAAAGACCGAGCAATATAATC
ATTGTTCAGAGCAACACC back to topCoding sequence (CDS) from alignment at CM002456.1:739547..740514- >rna925 ID=rna925|Name=rna925|organism=Nannochloropsis gaditana|type=CDS|length=630bp|location=Sequence derived from alignment at CM002456.1:739547..740514- (Nannochloropsis gaditana)
CGGCTCTTCTGCCCTACGGTATCCGCAAACTCCGCGATGGACGGTCCTTG
TACCAGAGCGACAAGCCCCTTACCGGGAGCCAGATCATGCGGGGGGCCTA
CATGAACTCTTCCAGCCAAGACATTGGACCTGACCCGGACTACGATTTTC
GATCAGGAGAGTGGCATGGCAGACGAAACGATCCTACCAAGAAGTAGATG
ATGATGATGATGATGATGGTTGCCGCCCCGGGTGCCGGCAAAAATGCAGC
AACACTATCCACACGCAATCGAAACCGCATTACTGTAGTACTGGTAACAT
TGGGTATAACAATGGCGGCTCTTCTGCCCTACGGTATCCGCAAACTCCGC
GATGGACGGTCCTTGTACCAGAGCGACAAGCCCCTTACCGGGAGCCAGAT
CATGCGGGGGGCCTACATGAACTCTTCCAGCCAAGACATTGGACCTGACC
CGGACTACGATTTTCGATCAGGAGAGTGGCATGGCAGACGAAACGATCCT
ACCAAGAAGTAGATGATGATGATGATGATGATGGTTGCCGCCCCGGGTGC
CGGCAAAAATGCAGCAACACTATCCACACGCAATCGAAACCGCATTACTG
TAGTACTGGTAACATTGGGTATAACAATGG back to top
|