EWM29776.1, cds925 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM29776.1 vs. NCBI_GenBank
Match: gi|585112356|gb|EWM29776.1| (hypothetical protein Naga_100022g38 [Nannochloropsis gaditana]) HSP 1 Score: 213.772 bits (543), Expect = 2.926e-70 Identity = 104/104 (100.00%), Postives = 104/104 (100.00%), Query Frame = 0 Query: 1 MMMMMMMVAAPGAGKNAATLSTRNRNRITVVLVTLGITMAALLPYGIRKLRDGRSLYQSDKPLTGSQIMRGAYMNSSSQDIGPDPDYDFRSGEWHGRRNDPTKK 104 MMMMMMMVAAPGAGKNAATLSTRNRNRITVVLVTLGITMAALLPYGIRKLRDGRSLYQSDKPLTGSQIMRGAYMNSSSQDIGPDPDYDFRSGEWHGRRNDPTKK Sbjct: 1 MMMMMMMVAAPGAGKNAATLSTRNRNRITVVLVTLGITMAALLPYGIRKLRDGRSLYQSDKPLTGSQIMRGAYMNSSSQDIGPDPDYDFRSGEWHGRRNDPTKK 104
BLAST of EWM29776.1 vs. NCBI_GenBank
Match: gi|698807508|ref|XP_009836783.1| (hypothetical protein H257_11511 [Aphanomyces astaci] >gi|574108339|gb|ETV73847.1| hypothetical protein H257_11511 [Aphanomyces astaci]) HSP 1 Score: 62.3882 bits (150), Expect = 1.329e-10 Identity = 32/88 (36.36%), Postives = 52/88 (59.09%), Query Frame = 0 Query: 13 AGKNAATLSTRNRNRITVV-LVTLGITMAALLPYGIRKLRDGRSLYQSDKPLTGSQIMRGAYMNSSSQDIGPDPDYDFRSGEWHGRRN 99 A + TL +R + + + V LG LPY I K + G++ + PL+ +++ RGA++NS S+DIGPDPD+ F + + GRR+ Sbjct: 2 ASRAQRTLKSRRESSLLIGGFVLLGGLAMYSLPYFIVKGKQGQNTLAKEGPLSKTEVRRGAFLNSGSKDIGPDPDWSFVTNSYQGRRS 89
BLAST of EWM29776.1 vs. NCBI_GenBank
Match: gi|695372497|ref|XP_009514826.1| (hypothetical protein PHYSODRAFT_470133 [Phytophthora sojae] >gi|348687737|gb|EGZ27551.1| hypothetical protein PHYSODRAFT_470133 [Phytophthora sojae]) HSP 1 Score: 60.8474 bits (146), Expect = 6.255e-10 Identity = 35/91 (38.46%), Postives = 48/91 (52.75%), Query Frame = 0 Query: 13 AGKNAATLSTRNRNRITVVLVTLGITMAALLPYGIRKLRDGRSLYQSDKPLTGSQIMRGAYMNSSSQDIGPDPDYDFRSGEWHGRRNDPTK 103 AGK A + + N V + T +P+ + G +L +KPL SQI RGAY NS S+D G DPD+D ++G +HGRR K Sbjct: 3 AGKRA--MKAKGSNGPVVGFALVVATGFFSIPF-VAHYTKGANLTAQEKPLNASQIRRGAYANSGSRDAGVDPDWDLKTGTYHGRRGPSVK 90
BLAST of EWM29776.1 vs. NCBI_GenBank
Match: gi|675196943|ref|XP_008907356.1| (hypothetical protein PPTG_13431 [Phytophthora parasitica INRA-310] >gi|566020951|gb|ETI43862.1| hypothetical protein F443_11327 [Phytophthora parasitica P1569] >gi|567958322|gb|ETK83911.1| hypothetical protein L915_11038 [Phytophthora parasitica] >gi|567987010|gb|ETL37325.1| hypothetical protein L916_10937 [Phytophthora parasitica] >gi|568016309|gb|ETL90486.1| hypothetical protein L917_10843 [Phytophthora parasitica] >gi|568046682|gb|ETM43787.1| hypothetical protein L914_10874 [Phytophthora parasitica] >gi|568092794|gb|ETN07599.1| hypothetical protein PPTG_13431 [Phytophthora parasitica INRA-310] >gi|570324594|gb|ETO72542.1| hypothetical protein F444_11394 [Phytophthora parasitica P1976] >gi|570948423|gb|ETP13680.1| hypothetical protein F441_11248 [Phytophthora parasitica CJ01A1] >gi|570981298|gb|ETP41742.1| hypothetical protein F442_11235 [Phytophthora parasitica P10297]) HSP 1 Score: 60.4622 bits (145), Expect = 7.831e-10 Identity = 28/61 (45.90%), Postives = 37/61 (60.66%), Query Frame = 0 Query: 43 LPYGIRKLRDGRSLYQSDKPLTGSQIMRGAYMNSSSQDIGPDPDYDFRSGEWHGRRNDPTK 103 +P+ + G +L +KPL SQI RGAY NS S+D G DPD+D +G +HGRR K Sbjct: 35 IPF-VAHYTKGANLTAQEKPLNASQIRRGAYANSGSRDAGADPDWDMSTGTYHGRRGRSVK 94
BLAST of EWM29776.1 vs. NCBI_GenBank
Match: gi|673031736|ref|XP_008869829.1| (hypothetical protein H310_06506 [Aphanomyces invadans] >gi|574474980|gb|ETW01981.1| hypothetical protein H310_06506 [Aphanomyces invadans]) HSP 1 Score: 60.4622 bits (145), Expect = 8.598e-10 Identity = 25/56 (44.64%), Postives = 40/56 (71.43%), Query Frame = 0 Query: 43 LPYGIRKLRDGRSLYQSDKPLTGSQIMRGAYMNSSSQDIGPDPDYDFRSGEWHGRR 98 LPY I K + G++ + PL+ +++ RGA++NS S+DIGPDPD++F + + GRR Sbjct: 33 LPYVIVKGKQGQNTLSKEGPLSVTEVRRGAFLNSGSKDIGPDPDWNFETNSYQGRR 88
BLAST of EWM29776.1 vs. NCBI_GenBank
Match: gi|1214691510|gb|OWZ06403.1| (hypothetical protein PHMEG_00021351 [Phytophthora megakarya]) HSP 1 Score: 58.9214 bits (141), Expect = 2.779e-9 Identity = 27/56 (48.21%), Postives = 36/56 (64.29%), Query Frame = 0 Query: 43 LPYGIRKLRDGRSLYQSDKPLTGSQIMRGAYMNSSSQDIGPDPDYDFRSGEWHGRR 98 +P+ + G +L +KPL SQI RGAY NS S+D G DPD+D +G +HGRR Sbjct: 36 IPF-VAHYTKGANLTAQEKPLNASQIRRGAYANSGSRDAGVDPDWDLSTGTYHGRR 90
BLAST of EWM29776.1 vs. NCBI_GenBank
Match: gi|325184417|emb|CCA18909.1| (hypothetical protein PITG_19672 [Albugo laibachii Nc14]) HSP 1 Score: 57.3806 bits (137), Expect = 9.803e-9 Identity = 31/71 (43.66%), Postives = 43/71 (60.56%), Query Frame = 0 Query: 30 VVLVTLGITMAALL--PYGIRKLRDGRSLYQSDKPLTGSQIMRGAYMNSSSQDIGPDPDYDFRSGEWHGRR 98 VV V IT A PY L+ + ++K L+ SQ+ RGAY+N+ S+DIGPDPDYD ++ W+G R Sbjct: 12 VVAVLALITAGAFFSVPYLSHYLKT-ENYQTTEKALSSSQVRRGAYLNTGSKDIGPDPDYDAKTRTWNGGR 81
BLAST of EWM29776.1 vs. NCBI_GenBank
Match: gi|301092111|ref|XP_002896228.1| (hypothetical protein PITG_19672 [Phytophthora infestans T30-4] >gi|262094858|gb|EEY52910.1| hypothetical protein PITG_19672 [Phytophthora infestans T30-4]) HSP 1 Score: 56.9954 bits (136), Expect = 1.979e-8 Identity = 30/76 (39.47%), Postives = 43/76 (56.58%), Query Frame = 0 Query: 31 VLVTLGITMAA---LLPYGIRKLRDGRSLYQSDKPLTGSQIMRGAYMNSSSQDIGPDPDYDFRSGEWHGRRNDPTK 103 ++ L + +AA +P+ + G +L +KPL SQI RGAY NS S+D G DPD+D +G +H RR K Sbjct: 20 IVFGLSLVVAAGFFSIPF-VAHYTKGANLTAQEKPLNASQIRRGAYANSGSRDAGADPDWDLSTGTYHDRRGSSLK 94
BLAST of EWM29776.1 vs. NCBI_GenBank
Match: gi|1173930926|gb|OQR83519.1| (hypothetical protein ACHHYP_14615 [Achlya hypogyna]) HSP 1 Score: 56.225 bits (134), Expect = 2.609e-8 Identity = 30/75 (40.00%), Postives = 46/75 (61.33%), Query Frame = 0 Query: 25 RNRITVVL-VTLGITMAALLPYGIRKLRDGRSLYQSDKPLTGSQIMRGAYMNSSSQDIGPDPDYDFRSGEWHGRR 98 RN++ V L V G ++ LP+ I + + ++ + PL+ SQI RG YMN+ S+DIG DPD+D + + GRR Sbjct: 3 RNKLAVGLAVGAGGLLSFSLPFWIVQSKKDQNTMSMEGPLSTSQIRRGVYMNTGSKDIGRDPDWDLTTNTYKGRR 77 The following BLAST results are available for this feature:
BLAST of EWM29776.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 9
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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