rna924, rna924 (mRNA) Nannochloropsis gaditana

Overview
Namerna924
Unique Namerna924
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1209
Alignment locationCM002456.1:738637..739392 +

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Properties
Property NameValue
Productankyrin unc44
Orig transcript idgnl|cribi|Naga_100022g37.871.mrna
Orig protein idgnl|cribi|Naga_100022g37.871
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002456.1supercontigCM002456.1:738637..739392 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100022g37gene887Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna924rna924-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM29772.1cds924Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna924 ID=rna924|Name=rna924|organism=Nannochloropsis gaditana|type=mRNA|length=1209bp
ATGGGTCATTTTCCTTGGGGCGCACCACACTCGCATGTTATGCGCGCAGC
TTTCTTTCTGGCTCTCCTCCTATTGCAGGACTTGGGGGAAGGCCACCCGT
CATCACCGGTAGGAAAAGCATTAGATCAACCTTTCCTCGCGCGACGGAGG
GAAATCAGGGTCCAGCGTCAGAGAGTGTCGAATTCAGGAGGGAGGCAGAC
ACGCGGCAAAACCCATGGAGATGCCAAACTCCACCGGCGACGGATTGATC
AAGGCCAAAAGGAGCGGGAGTCTAGTGCAGCTGCAGCCATGCCGGACCAG
GAGCCACGGGTGGAGGAGGAGGACTTGTTAGAAGAGGCTATACGTGAACG
CTCTATCAATAAATACTTTGCAGCGGATCCTTTATGGACGGGTCAGCTTG
TGGCGAGCGCTTTGGCATGGGCTCTGGTGCTGGCTGCGGCCTCTTTGCCT
CCGGACATTGGCAGAGACCGCCCGATCCTACGTGTGCTGGCTGCCAGGCA
CGCCCTTGGCCTAGCGGCGGACGTGCGCCGCGTGCTCTTGGTGGCGGCGG
ATGGCGCTGTCAATAGAAGAAGGATTCACGAGCTCGTTGGCGGCCTGACA
AGCGTTCCCGGGGCTCCTGCCTATCTGCTCTACACAGCCGCACTGCTCGC
ATGGCCCGCGACTGACTCGCCTAAGGGGGTAGTTAACGGCCTCGCGCCGC
TCCTTCTCCGTGAATTTTTCACGGCCTTAGCAGCAGTTCTGGATTTGCTT
CAGATTTTAGGTGTGTCCTCGGAGGCTGCCTCAGGGCCTGGCTCCGCTGC
TCGCTGTGGACCGCGGAGGCCCATGCCTGGTTCACTCTCTACCATTAGCT
TGCTGCTTGAGGCATCGCTGGGGCTGTCTTTGGCGGTGGCCCTCTTGCGG
TGCAGGAACCAAGGCGGTACGCTTTTGCGGCGGTGTTTGGCAGCGCTGCT
CTTCGCAAATTTCTTGTACAATCGAATTGGCCACATTTCTGGGCTTAAGG
AGGCGATTTGCCGACGTTCTGTTGGTGGCTCGGCTCTCGCTCTACTCAAG
CCTATATGGAAAGACATGGAACCTGCGACGCGTCAACTGACGGCCGTAAG
TCGAGCCACGCTTGCCCGCTTGGACACGATCCCCGGGGGAGAAAGAGTAA
GATCCATGCTGCAGCTTCTCGGCTTTCTAGAAGACGATGCAGAGACAAAG
GAGGCATAA
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protein sequence of rna924

>rna924-protein ID=rna924-protein|Name=rna924|organism=Nannochloropsis gaditana|type=polypeptide|length=153bp
MIEGKEFDVNEAGAGDRRPLHRAAGSNHIEVCRYLIERGAKIDQADKSGR
TALHWASISGHQETAELLVERGANLMAETSSKMTPLHGAAEGGRAELIRL
FLTKGDKDALVNARDADNKTPFDLAMQGKHAAVVKALKEMGDPNAQGAAC
CVM
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mRNA from alignment at CM002456.1:738637..739392+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna924 ID=rna924|Name=rna924|organism=Nannochloropsis gaditana|type=mRNA|length=756bp|location=Sequence derived from alignment at CM002456.1:738637..739392+ (Nannochloropsis gaditana)
ATGATAGAGGGTAAAGAATTCGACGTTAATGAAGGTATGTCCTTATATTT
GTTGGGGGTAAGGGTGGATTAAAGCAAATGTTGAATTGAGATGTCTAAAG
TGGGCAGTGCCTTGCACTAGTTTTATTCCATGTCCTATATATTCCACTTA
AAGCCGGAGCGGGGGACAGAAGACCGCTTCATCGCGCTGCAGGAAGTAAT
CATATTGAGGTGTGCCGGTACCTTATCGAGAGGGGGGCCAAAATTGATCA
GGTTTGTGAGCAAGAGTGCGGTGGATGGAAACTCTTACAAGGGGCCAAAT
GTCGCGGACGAGCAATATGCTGCGGCTCCATGTCCTGCTCACTGCTTTTC
AAAAATTCTCCTTGTTCTCTGCACCTCAGATGCAGTATTTTTCTCAGACT
TACTTTTCCGTGTACGTTTCTTGCAGGCAGATAAAAGTGGACGCACAGCG
TTACATTGGGCCAGCATTAGCGGACACCAGGAAACGGCTGAGCTTCTTGT
AGAGAGAGGTGCGAATCTCATGGCTGAAACTTCTTCTAAAATGACCCCCC
TACACGGGGCCGCcgagggtggaagggcggagcTCATTCGGCTCTTCCTC
ACGAAGGGTGACAAGGACGCCCTTGTGAATGCTCGCGATGCTGACAACAA
GACACCTTTCGATCTGGCCATGCAGGGCAAACACGCTGCGGTTGTCAAAG
CTCTGAAGGAAATGGGTGATCCCAATGCACAGGGAGCAGCATGTTGCGTG
ATGTAA
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Coding sequence (CDS) from alignment at CM002456.1:738637..739392+

>rna924 ID=rna924|Name=rna924|organism=Nannochloropsis gaditana|type=CDS|length=1386bp|location=Sequence derived from alignment at CM002456.1:738637..739392+ (Nannochloropsis gaditana)
ATGATAGAGGGTAAAGAATTCGACGTTAATGAAGCCGGAGCGGGGGACAG
AAGACCGCTTCATCGCGCTGCAGGAAGTAATCATATTGAGGTGTGCCGGT
ACCTTATCGAGAGGGGGGCCAAAATTGATCAGGCAGATAAAAGTGGACGC
ACAGCGTTACATTGGGCCAGCATTAGCGGACACCAGGAAACGGCTGAGCT
TCTTGTAGAGAGAGGTGCGAATCTCATGGCTGAAACTTCTTCTAAAATGA
CCCCCCTACACGGGGCCGCcgagggtggaagggcggagcTCATTCGGCTC
TTCCTCACGAAGGGTGACAAGGACGCCCTTGTGAATGCTCGCGATGCTGA
CAACAAGACACCTTTCGATCTGGCCATGCAGGGCAAACACGCTGCGGTTG
TCAAAGCTCTGAAGGAAATGGGTGATCCCAATGCACAGGGAGCAGCATGT
TGCGTGATGTAAATGATAGAGGGTAAAGAATTCGACGTTAATGAAGCCGG
AGCGGGGGACAGAAGACCGCTTCATCGCGCTGCAGGAAGTAATCATATTG
AGGTGTGCCGGTACCTTATCGAGAGGGGGGCCAAAATTGATCAGGCAGAT
AAAAGTGGACGCACAGCGTTACATTGGGCCAGCATTAGCGGACACCAGGA
AACGGCTGAGCTTCTTGTAGAGAGAGGTGCGAATCTCATGGCTGAAACTT
CTTCTAAAATGACCCCCCTACACGGGGCCGCcgagggtggaagggcggag
cTCATTCGGCTCTTCCTCACGAAGGGTGACAAGGACGCCCTTGTGAATGC
TCGCGATGCTGACAACAAGACACCTTTCGATCTGGCCATGCAGGGCAAAC
ACGCTGCGGTTGTCAAAGCTCTGAAGGAAATGGGTGATCCCAATGCACAG
GGAGCAGCATGTTGCGTGATGTAAATGATAGAGGGTAAAGAATTCGACGT
TAATGAAGCCGGAGCGGGGGACAGAAGACCGCTTCATCGCGCTGCAGGAA
GTAATCATATTGAGGTGTGCCGGTACCTTATCGAGAGGGGGGCCAAAATT
GATCAGGCAGATAAAAGTGGACGCACAGCGTTACATTGGGCCAGCATTAG
CGGACACCAGGAAACGGCTGAGCTTCTTGTAGAGAGAGGTGCGAATCTCA
TGGCTGAAACTTCTTCTAAAATGACCCCCCTACACGGGGCCGCcgagggt
ggaagggcggagcTCATTCGGCTCTTCCTCACGAAGGGTGACAAGGACGC
CCTTGTGAATGCTCGCGATGCTGACAACAAGACACCTTTCGATCTGGCCA
TGCAGGGCAAACACGCTGCGGTTGTCAAAGCTCTGAAGGAAATGGGTGAT
CCCAATGCACAGGGAGCAGCATGTTGCGTGATGTAA
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Synonyms
Publications