EWM29772.1, cds924 (CDS) Nannochloropsis gaditana

Overview
NameEWM29772.1
Unique Namecds924
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002456.1:738637..738670 +
Alignment locationCM002456.1:738790..738887 +
Alignment locationCM002456.1:739063..739392 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM29772.1
Productankyrin unc44
Orig transcript idgnl|cribi|Naga_100022g37.871.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002456.1supercontigCM002456.1:738637..738670 +
CM002456.1supercontigCM002456.1:738790..738887 +
CM002456.1supercontigCM002456.1:739063..739392 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR020683Ankyrin_rpt-contain_dom
IPR002110Ankyrin_rpt
Homology
BLAST of EWM29772.1 vs. NCBI_GenBank
Match: gi|585112352|gb|EWM29772.1| (ankyrin unc44 [Nannochloropsis gaditana])

HSP 1 Score: 314.309 bits (804), Expect = 1.321e-108
Identity = 153/153 (100.00%), Postives = 153/153 (100.00%), Query Frame = 0
Query:    1 MIEGKEFDVNEAGAGDRRPLHRAAGSNHIEVCRYLIERGAKIDQADKSGRTALHWASISGHQETAELLVERGANLMAETSSKMTPLHGAAEGGRAELIRLFLTKGDKDALVNARDADNKTPFDLAMQGKHAAVVKALKEMGDPNAQGAACCVM 153
            MIEGKEFDVNEAGAGDRRPLHRAAGSNHIEVCRYLIERGAKIDQADKSGRTALHWASISGHQETAELLVERGANLMAETSSKMTPLHGAAEGGRAELIRLFLTKGDKDALVNARDADNKTPFDLAMQGKHAAVVKALKEMGDPNAQGAACCVM
Sbjct:    1 MIEGKEFDVNEAGAGDRRPLHRAAGSNHIEVCRYLIERGAKIDQADKSGRTALHWASISGHQETAELLVERGANLMAETSSKMTPLHGAAEGGRAELIRLFLTKGDKDALVNARDADNKTPFDLAMQGKHAAVVKALKEMGDPNAQGAACCVM 153          
BLAST of EWM29772.1 vs. NCBI_GenBank
Match: gi|675197193|ref|XP_008907481.1| (hypothetical protein PPTG_13508 [Phytophthora parasitica INRA-310] >gi|566020797|gb|ETI43708.1| hypothetical protein F443_11441 [Phytophthora parasitica P1569] >gi|567958174|gb|ETK83767.1| hypothetical protein L915_11133 [Phytophthora parasitica] >gi|567986868|gb|ETL37184.1| hypothetical protein L916_11029 [Phytophthora parasitica] >gi|568016156|gb|ETL90333.1| hypothetical protein L917_10938 [Phytophthora parasitica] >gi|568046541|gb|ETM43646.1| hypothetical protein L914_10962 [Phytophthora parasitica] >gi|568092296|gb|ETN07105.1| hypothetical protein PPTG_13508 [Phytophthora parasitica INRA-310] >gi|570324441|gb|ETO72389.1| hypothetical protein F444_11506 [Phytophthora parasitica P1976] >gi|570948270|gb|ETP13527.1| hypothetical protein F441_11359 [Phytophthora parasitica CJ01A1] >gi|570981111|gb|ETP41597.1| hypothetical protein F442_11330 [Phytophthora parasitica P10297] >gi|970631975|gb|KUF78405.1| Ankyrin-2 [Phytophthora nicotianae] >gi|970646061|gb|KUF86351.1| hypothetical protein AM588_10001126 [Phytophthora nicotianae])

HSP 1 Score: 184.111 bits (466), Expect = 8.615e-57
Identity = 90/152 (59.21%), Postives = 114/152 (75.00%), Query Frame = 0
Query:    1 MIEGKEFDVNEAGAGDRRPLHRAAGSNHIEVCRYLIERGAKIDQADKSGRTALHWASISGHQETAELLVERGANLMAETSSKMTPLHGAAEGGRAELIRLFLTKGDKDALVNARDADNKTPFDLAMQGKHAAVVKALKEMGDPNAQGAACCV 152
            ++E K  DVN  GAGDRR LHRAAG NH E+C  L+++GA+ID ADKSGRTALHWASISGH+E   +L+++GAN+ AET++ MT LHGAAEGG+ E++RL +   +  A    +DA+ K PFD AM GKH AVVK LKEMGD  AQ A+C +
Sbjct:   22 ILEEKSVDVNAPGAGDRRALHRAAGGNHAELCTLLLDKGAEIDGADKSGRTALHWASISGHKEATLVLLQKGANINAETTTGMTALHGAAEGGKVEIVRLLM---ENKADSAKKDANGKLPFDYAMDGKHKAVVKVLKEMGDAAAQSASCVI 170          
BLAST of EWM29772.1 vs. NCBI_GenBank
Match: gi|695376731|ref|XP_009515848.1| (hypothetical protein PHYSODRAFT_353557 [Phytophthora sojae] >gi|348688759|gb|EGZ28573.1| hypothetical protein PHYSODRAFT_353557 [Phytophthora sojae])

HSP 1 Score: 183.341 bits (464), Expect = 1.873e-56
Identity = 90/152 (59.21%), Postives = 114/152 (75.00%), Query Frame = 0
Query:    1 MIEGKEFDVNEAGAGDRRPLHRAAGSNHIEVCRYLIERGAKIDQADKSGRTALHWASISGHQETAELLVERGANLMAETSSKMTPLHGAAEGGRAELIRLFLTKGDKDALVNARDADNKTPFDLAMQGKHAAVVKALKEMGDPNAQGAACCV 152
            ++E K  DVN  GAGDRR LHRAAG NH E+C  L++RGA+ID ADKSGRTALHWASISGH+E   +L+++GAN+ AET++ MT LHGAAEGG+ E++RL +   +  A    +DA+ K PFD AM GKH AVVK LK+MGD  AQ A+C +
Sbjct:   22 ILEEKSVDVNAPGAGDRRALHRAAGGNHAELCTLLLDRGAEIDGADKSGRTALHWASISGHKEATLVLLQKGANINAETTTGMTALHGAAEGGKVEIVRLLM---ENKADSFKKDANGKLPFDYAMDGKHKAVVKVLKDMGDAAAQSASCVI 170          
BLAST of EWM29772.1 vs. NCBI_GenBank
Match: gi|1214713658|gb|OWZ24542.1| (hypothetical protein PHMEG_000359 [Phytophthora megakarya])

HSP 1 Score: 182.57 bits (462), Expect = 4.026e-56
Identity = 88/152 (57.89%), Postives = 115/152 (75.66%), Query Frame = 0
Query:    1 MIEGKEFDVNEAGAGDRRPLHRAAGSNHIEVCRYLIERGAKIDQADKSGRTALHWASISGHQETAELLVERGANLMAETSSKMTPLHGAAEGGRAELIRLFLTKGDKDALVNARDADNKTPFDLAMQGKHAAVVKALKEMGDPNAQGAACCV 152
            ++E K  DVN  GAGDRR LHRAAG NH E+C  L+++GA+I+ ADKSGRTALHWASISGH+E   +L+++GAN+ AET++ MT LHGAAEGG+ E++RL +   +  A  + +DA+ K PFD AM GKH AVVK LK+MGD  AQ A+C +
Sbjct:   22 ILEEKSVDVNAPGAGDRRALHRAAGGNHAELCTLLLDKGAEINGADKSGRTALHWASISGHKEATLVLLQKGANINAETTTGMTALHGAAEGGKVEIVRLLM---ENKADSSKKDANGKLPFDYAMDGKHKAVVKVLKDMGDAAAQSASCVI 170          
BLAST of EWM29772.1 vs. NCBI_GenBank
Match: gi|301118000|ref|XP_002906728.1| (conserved hypothetical protein [Phytophthora infestans T30-4] >gi|262108077|gb|EEY66129.1| conserved hypothetical protein [Phytophthora infestans T30-4])

HSP 1 Score: 181.03 bits (458), Expect = 1.447e-55
Identity = 88/152 (57.89%), Postives = 114/152 (75.00%), Query Frame = 0
Query:    1 MIEGKEFDVNEAGAGDRRPLHRAAGSNHIEVCRYLIERGAKIDQADKSGRTALHWASISGHQETAELLVERGANLMAETSSKMTPLHGAAEGGRAELIRLFLTKGDKDALVNARDADNKTPFDLAMQGKHAAVVKALKEMGDPNAQGAACCV 152
            ++E K  DVN  GAGDRR LHRAAG NH E+C  L+++GA+ID ADKSGRTALHWASISGH+E   +L+++GAN+ A T++ MT LHGAAEGG+ EL+RL +   +  A  + +D++ K PFD AM GKH AVVK LK+MGD  AQ A+C +
Sbjct:   22 ILEEKSVDVNAPGAGDRRALHRAAGGNHAELCTLLLDKGAEIDGADKSGRTALHWASISGHKEATLVLLQKGANINAGTTTGMTALHGAAEGGKVELVRLLM---ENKADSSKKDSNGKLPFDYAMDGKHKAVVKVLKDMGDAAAQSASCVI 170          
BLAST of EWM29772.1 vs. NCBI_GenBank
Match: gi|953488345|emb|CEG47829.1| (Ankyrin [Plasmopara halstedii])

HSP 1 Score: 181.03 bits (458), Expect = 1.474e-54
Identity = 89/153 (58.17%), Postives = 115/153 (75.16%), Query Frame = 0
Query:    1 MIEGKEFDVNEAGAGDRRPLHRAAGSNHIEVCRYLIERGAKIDQADKSGRTALHWASISGHQETAELLVERGANLMAETSSKMTPLHGAAEGGRAELIRLFL-TKGDKDALVNARDADNKTPFDLAMQGKHAAVVKALKEMGDPNAQGAACCV 152
            ++E K  DVN  GAGDRR LHRAAG NH E+C  L+++GA+I+ ADKSGRTALHWASISGH+E   LL+++GAN+ AET++ MT LHGAAEGG+ E++RL +  K D     + +D++ K PFD AM GKH AVVK LK+MGD  AQ A+C +
Sbjct:  100 ILEEKSVDVNAPGAGDRRALHRAAGGNHAELCTLLLDKGAEINGADKSGRTALHWASISGHKEATLLLLQKGANINAETTTGMTALHGAAEGGKVEIVRLLMELKADS----SKKDSNGKLPFDYAMDGKHKAVVKVLKDMGDVAAQSASCII 248          
BLAST of EWM29772.1 vs. NCBI_GenBank
Match: gi|698788630|ref|XP_009827347.1| (hypothetical protein H257_04505 [Aphanomyces astaci] >gi|574118436|gb|ETV83917.1| hypothetical protein H257_04505 [Aphanomyces astaci])

HSP 1 Score: 173.326 bits (438), Expect = 1.651e-52
Identity = 85/152 (55.92%), Postives = 109/152 (71.71%), Query Frame = 0
Query:    1 MIEGKEFDVNEAGAGDRRPLHRAAGSNHIEVCRYLIERGAKIDQADKSGRTALHWASISGHQETAELLVERGANLMAETSSKMTPLHGAAEGGRAELIRLFLTKGDKDALVNARDADNKTPFDLAMQGKHAAVVKALKEMGDPNAQGAACCV 152
            ++E    DVN  GA DRRPLHRAAG NH E+C  LIERGA+++  DKSGRT LHWA ISGH+E A +L+E+GA + A T+S MT L GAAE G+++++RL + +     L   +D D K  FDLAM GKH AVVKA+KE+GDP AQ A+C +
Sbjct:   22 ILEDPSMDVNAPGAADRRPLHRAAGGNHAELCSILIERGAEVNCPDKSGRTPLHWACISGHKEAAIVLLEKGAQVNAVTTSGMTSLMGAAEAGKSDVVRLLMERKADSTL---KDKDGKLAFDLAMAGKHNAVVKAMKELGDPAAQSASCVI 170          
BLAST of EWM29772.1 vs. NCBI_GenBank
Match: gi|635369784|emb|CCI42004.1| (unnamed protein product [Albugo candida])

HSP 1 Score: 172.555 bits (436), Expect = 3.012e-52
Identity = 84/153 (54.90%), Postives = 113/153 (73.86%), Query Frame = 0
Query:    1 MIEGKEFDVNEAGAGDRRPLHRAAGSNHIEVCRYLIERGAKIDQADKSGRTALHWASISGHQETAELLVERGANLMAETSSKMTPLHGAAEGGRAELIRLFL-TKGDKDALVNARDADNKTPFDLAMQGKHAAVVKALKEMGDPNAQGAACCV 152
            ++E    +VN  GAGDRR LHRAAG NH EVC  L+E+GA I+  DKSGRTALHWA+ISGH+E   +L+++GA + AET++K TPLHGA EGG+ E++RL +  K D     + +DA  K P+DLAM+GKH AV+K LKEMGD +A+ ++C +
Sbjct:   22 ILEENLVNVNAPGAGDRRALHRAAGGNHAEVCTLLLEKGADINGPDKSGRTALHWAAISGHKEAILILLQKGAYVNAETTTKATPLHGACEGGKVEVVRLLMQNKADP----SKKDASGKVPYDLAMEGKHKAVLKVLKEMGDTSAKSSSCLL 170          
BLAST of EWM29772.1 vs. NCBI_GenBank
Match: gi|673036304|ref|XP_008872113.1| (hypothetical protein H310_08217 [Aphanomyces invadans] >gi|574472552|gb|ETV99557.1| hypothetical protein H310_08217 [Aphanomyces invadans])

HSP 1 Score: 171.4 bits (433), Expect = 1.035e-51
Identity = 84/152 (55.26%), Postives = 109/152 (71.71%), Query Frame = 0
Query:    1 MIEGKEFDVNEAGAGDRRPLHRAAGSNHIEVCRYLIERGAKIDQADKSGRTALHWASISGHQETAELLVERGANLMAETSSKMTPLHGAAEGGRAELIRLFLTKGDKDALVNARDADNKTPFDLAMQGKHAAVVKALKEMGDPNAQGAACCV 152
            ++E    DVN  GA DRRPLHRAAG NH E+C  LIERGA+++  DKSGRT LHWA ISGH+E A +L+++GA + A T+S MT L GAAE G+++++RL + +     L   +D D K  FDLAM GKH AVVKA+KE+GDP AQ A+C +
Sbjct:   22 ILEDPSMDVNAPGAADRRPLHRAAGGNHAELCSILIERGAEVNCPDKSGRTPLHWACISGHKEAAIVLLDKGAEVNAVTTSGMTSLMGAAEAGKSDVVRLLMERKADSTL---KDKDGKLAFDLAMAGKHNAVVKAMKELGDPAAQSASCAI 170          
BLAST of EWM29772.1 vs. NCBI_GenBank
Match: gi|325180243|emb|CCA14646.1| (conserved hypothetical protein [Albugo laibachii Nc14])

HSP 1 Score: 173.326 bits (438), Expect = 3.735e-51
Identity = 84/153 (54.90%), Postives = 113/153 (73.86%), Query Frame = 0
Query:    1 MIEGKEFDVNEAGAGDRRPLHRAAGSNHIEVCRYLIERGAKIDQADKSGRTALHWASISGHQETAELLVERGANLMAETSSKMTPLHGAAEGGRAELIRLFL-TKGDKDALVNARDADNKTPFDLAMQGKHAAVVKALKEMGDPNAQGAACCV 152
            ++E    +VN  GAGDRR LHRAAG NH EVC  L+E+GA I+  DKSGRTALHWA+ISGH+E   +L+++GA++ AET++  TPLHGA EGG+ E++RL +  K D     + +DA  K P+DLAM+GKH AVVK LKEMGD +A+ ++C +
Sbjct:  128 ILEENLVNVNAPGAGDRRALHRAAGGNHAEVCTLLLEKGADINGPDKSGRTALHWAAISGHKEAILVLLQKGAHVNAETTTNATPLHGACEGGKVEVVRLLMQNKADP----SKKDASGKVPYDLAMEGKHKAVVKVLKEMGDTSAKSSSCVL 276          
The following BLAST results are available for this feature:
BLAST of EWM29772.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585112352|gb|EWM29772.1|1.321e-108100.00ankyrin unc44 [Nannochloropsis gaditana][more]
gi|675197193|ref|XP_008907481.1|8.615e-5759.21hypothetical protein PPTG_13508 [Phytophthora para... [more]
gi|695376731|ref|XP_009515848.1|1.873e-5659.21hypothetical protein PHYSODRAFT_353557 [Phytophtho... [more]
gi|1214713658|gb|OWZ24542.1|4.026e-5657.89hypothetical protein PHMEG_000359 [Phytophthora me... [more]
gi|301118000|ref|XP_002906728.1|1.447e-5557.89conserved hypothetical protein [Phytophthora infes... [more]
gi|953488345|emb|CEG47829.1|1.474e-5458.17Ankyrin [Plasmopara halstedii][more]
gi|698788630|ref|XP_009827347.1|1.651e-5255.92hypothetical protein H257_04505 [Aphanomyces astac... [more]
gi|635369784|emb|CCI42004.1|3.012e-5254.90unnamed protein product [Albugo candida][more]
gi|673036304|ref|XP_008872113.1|1.035e-5155.26hypothetical protein H310_08217 [Aphanomyces invad... [more]
gi|325180243|emb|CCA14646.1|3.735e-5154.90conserved hypothetical protein [Albugo laibachii N... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna924rna924Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications