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Properties
| Property Name | Value |
|---|
| Product | ubiquitin-conjugating enzyme e2 i |
| Orig transcript id | gnl|cribi|Naga_100019g40.492.mrna |
| Orig protein id | gnl|cribi|Naga_100019g40.492 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037252.1 | supercontig | KK037252.1:167535..168634 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna9232 ID=rna9232|Name=rna9232|organism=Nannochloropsis gaditana|type=mRNA|length=1995bp
TGTTGCGGGGGCTTGGTCGCCGGAGAGCTGAGACATCAGGCTTTTCTCGC
TTGGCGAGGCCTCAAGCCGCTGCACGTGGACGACATTCTCAATCCTTGCC
GGGACCCACGCCTGTGAAGTAGAGCGTTTATCGGCAAATATGTTGCTTTC
GACCGCGTACACGAGGCACAGTGTTCACAGGGCTCTTTGTCTACTCTCTT
CGATGCTCAAGTGCCCAACAGGCGACTCGACCGGGCGGCAAATCGACCTC
CGTGAGGTGGCAGGAACGTGTGGATCTGTCATTGTATGACCTGTATGCAA
GAGGCGCGATTCTCCATGGTTACCTGGGCCCAGCCACTTACACGGGCTTA
AAATGTCGTTATTTCCGCGGTCTCTTAGAACGTTTGCGAGCGAGTTCGAG
CTGTGGCCCTTGCCGGCGGACGAGGAGGCACTCGCTCTCTCTGCGCGTCG
GCCTCCCGGCTACTTTGACTGCGACGACATCGCTTTGCGTACACCACAAG
AGGAAGTCGAGAATGGTATGGTTGCGGCGCTAGCTCATTGGGCTGACTGG
GAAGCATCTCATGTGTCCCTTGCGTCGCTAGAAGGCCAGAGGGTAGTGCG
CCTACCGCCAGGGATGAGGCTGAGGGAGCACGACAAAGAGGTAGACAGGG
ACGAAAACCGTGACTCCAGGACGCAGAGCGTGCAGGAGAATATGAATGAA
AGGAGCCCTTTGTCTCGAAACCAAGGCGAAAACGGCACCCCATCAGCTCA
CCATTGCGGAGAGAGGGTGAACGGCAGCATAGGTAGCAACCTTCACGTGT
CAGTGGAAGGGCCTGACGAGCTGGCAATGTTGGATATATTAGATAAGGTC
CCTGATTTCAAACGAGTCGAGGCGGGACTCCGCTCTCGTATGGAGTCATC
GCAATTAGCCTTGGGTCGATGGCGTTTGGCGAACGAAAAATTTGGGGCTG
GTATGCGGGACTTTCGGCGGTTGCCCTTCTTGCGCAAGGCCGTCAATGTG
ATTCAGGCCCCGGCACACTCCAGCATGACCAGTAATGCAGCCTCCGAGGC
GGGGCAGCTGATGCAAGACGACGAAGCCTTGGTGACGGTCACCATTTTCG
GTAACCGCGCATCGATGCTGTACCGGCAAGAGGATTATCTCCTAAGGGCG
GGAAATACGCTCGGGGATCTGCATCGGGTCTTTTCCTGCTCCCTGGCCGC
GATGATGGCACAGGGTGATCAGGGAGACCGGTCATGGGATAGTCTCCAGG
CTGGCATTCCGGCTTTTTTCTTTATAGAGGGTAAGTTTTACGCGGCGATG
CAGCCGAGGGGGCACAAGAAAGGGGAAAGGGAGGAACAGACGGGTGTCGA
GCATGAAGAGGAAAGCCATGGGAGGACTGTTATTGAACACCTGCGGTCAA
TCATGGCCTGGACGGACGAGCCTGGCAAAAACCGACGGGAACAGCTTGGG
CTGGGCACGGAGGTGGACTGGGAGGTGCTAGACATGGACCGCGTCCGGCT
CTCGGACCTGACGTTGCGGATCGGCACCCGCTATCTCTATAGCCATCTGG
GAGAATGCGAGCACCATTTTAATATCTCCGACATACGCCTCCTGGGCCCT
CAGGATTCGCGCAATTGCCAAGACTACCCCGCGCTTGTCTTCCAAAAGCA
CTACAGGAGAAGGCGTTGCGCGGTTTGTGACGTCCGTCTTGGAAAATTCT
GTGCGCTGGGCGACCCTGTTGGAGATGATCACAGGATGATATACTGTGAA
TTCTGTCATTACCTCCTGCACTACGATGCAGAGGGACATTTGCTCCGAGA
CGACTTTGAGCTCTTTCCTTACATGCACGATGATTGAGACCGTGCTATGA
TGTGGAGACCGTAGGGTTTGGAAGAGTCAGTTTCCTACGTGTAAATTTTA
ATCAAGAAAGCATTTCTGCTGAAACGGAAAAATAAATCTTAATCAAAATC
AATTGTTTCTAGCAGATCGGCAGACGCAATCTAAAACGTGTGTGT back to topprotein sequence of rna9232 >rna9232-protein ID=rna9232-protein|Name=rna9232|organism=Nannochloropsis gaditana|type=polypeptide|length=160bp
MSGGIARGRLQEERKAWRKDHPHGFVARPVLDADGSMNLMSWDCSIPGKE
GTDWEGGVFKVTMEFSEDYPSKPPKCKFVPALFHPNVYPSGTVCLSILNE
DEDWRPAITVKQMLLGIQDLLDSPNPESPAQAQAYQLFVTNREEYRRRVR
IEAKRNTPAS back to topmRNA from alignment at KK037252.1:167535..168634+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna9232 ID=rna9232|Name=rna9232|organism=Nannochloropsis gaditana|type=mRNA|length=1100bp|location=Sequence derived from alignment at KK037252.1:167535..168634+ (Nannochloropsis gaditana)
CGCGGCCATGAGCGTGCTGCATTGCAGACGGATATTATAGAATAATACAG
AACTGTCACGTGGACACTATGCAGATGTACTCCAATCTTATATCCGAGCT
AGAATCGAGCTCTTTGCATCGCTTGCTACTTTTCCCGTGCATGCACGACG
ACTCGTTGACGCACCAATCATTTGATCTTACATTTGAAACTCACAAACCT
GGATGCTCCACTCTCTCTGATACAGCGACCGCTGTccgtcctccaagccc
gaGACCATGAGCGGTGGAATCGCTCGCGGACGGTTGCAAGAGGAGCGGAA
GGCCTGGCGCAAAGACCATCCCCACGGCTTCGTGGCCCGACCAGTCTTGG
ACGCGGACGGCTCCATGAATCTGATGAGCTGGGACTGCTCGATACCAGGA
AAGGTAAACGTGCAGACGGTCCGatgaggggagagaggggacggggaggt
agTCGTTGCCTGCCCGGGTGAAGCAGTGACCCTGGTCCGTCTCGTCGGCT
CCTGACCTGAACAAACCCTCTCTCTGCATTGACGCACAGGAAGGAACGGA
CTGGGAGGGGGGTGTTTTCAAGGTGACGATGGAGTTCTCGGAGGACTACC
CCTCCAAGCCTCCCAAGTGCAAATTCGTCCCGGCGCTCTTCCACCCCAAC
GTCTATCCCTCGGGCACGGTCTGTCTCTCCATATTaaacgaggacgagga
ctgGAGGCCCGCCATCACAGTCAAGCAGATGCTTCTGGGCATCCAAGACC
TATTGGACAGTCCCAACCCGGAGAGTCCCGCGCAGGCGCAAGCCTACCAG
CTCTTCGTCACTAACCGGGAGGAATACCGTCGGCGGGTGCGCATCGAGGC
GAAACGCAACACGCCGGCCTCATAGGAGTTTGGGAGGCTCTGTCGTGGTT
GTACATGTGGTCGCACGAGCGGCAGAGGgccagcagggagagggtgggag
agagggaagggaggagggagggggccccCGGTGTGCTTGCCCTGGACCTA
AGTGGAGGTGGCTGGCCCTGAATCTGATGTAAGATGAGATGCGAGGGAAC
CGACGTATCGCCACAGGTAAAAAATATAACTTGAAGCAGTAGAAAGCGCC
back to topCoding sequence (CDS) from alignment at KK037252.1:167535..168634+ >rna9232 ID=rna9232|Name=rna9232|organism=Nannochloropsis gaditana|type=CDS|length=966bp|location=Sequence derived from alignment at KK037252.1:167535..168634+ (Nannochloropsis gaditana)
ATGAGCGGTGGAATCGCTCGCGGACGGTTGCAAGAGGAGCGGAAGGCCTG
GCGCAAAGACCATCCCCACGGCTTCGTGGCCCGACCAGTCTTGGACGCGG
ACGGCTCCATGAATCTGATGAGCTGGGACTGCTCGATACCAGGAAAGGAA
GGAACGGACTGGGAGGGGGGTGTTTTCAAGGTGACGATGGAGTTCTCGGA
GGACTACCCCTCCAAGCCTCCCAAGTGCAAATTCGTCCCGGCGCTCTTCC
ACCCCAACGTCTATCCCTCGGGCACGGTCTGTCTCTCCATATTaaacgag
gacgaggactgGAGGCCCGCCATCACAGTCAAGCAGATGCTTCTGGGCAT
CCAAGACCTATTGGACAGTCCCAACCCGGAGAGTCCCGCGCAGGCGCAAG
CCTACCAGCTCTTCGTCACTAACCGGGAGGAATACCGTCGGCGGGTGCGC
ATCGAGGCGAAACGCAACACGCCGGCCTCATAGATGAGCGGTGGAATCGC
TCGCGGACGGTTGCAAGAGGAGCGGAAGGCCTGGCGCAAAGACCATCCCC
ACGGCTTCGTGGCCCGACCAGTCTTGGACGCGGACGGCTCCATGAATCTG
ATGAGCTGGGACTGCTCGATACCAGGAAAGGAAGGAACGGACTGGGAGGG
GGGTGTTTTCAAGGTGACGATGGAGTTCTCGGAGGACTACCCCTCCAAGC
CTCCCAAGTGCAAATTCGTCCCGGCGCTCTTCCACCCCAACGTCTATCCC
TCGGGCACGGTCTGTCTCTCCATATTaaacgaggacgaggactgGAGGCC
CGCCATCACAGTCAAGCAGATGCTTCTGGGCATCCAAGACCTATTGGACA
GTCCCAACCCGGAGAGTCCCGCGCAGGCGCAAGCCTACCAGCTCTTCGTC
ACTAACCGGGAGGAATACCGTCGGCGGGTGCGCATCGAGGCGAAACGCAA
CACGCCGGCCTCATAG back to top
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