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Properties
| Property Name | Value |
|---|
| Product | conserved unknown protein |
| Orig transcript id | gnl|cribi|Naga_100022g33.880.mrna |
| Orig protein id | gnl|cribi|Naga_100022g33.880 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002456.1 | supercontig | CM002456.1:730593..732459 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna920 ID=rna920|Name=rna920|organism=Nannochloropsis gaditana|type=mRNA|length=1734bp
ATGGCGGAGCGTTTGTACCAAACTTTTTTTCATTTGGTTTTATGTTTTGG
GATATCACTCGGCTTTCGGCCTCCCAGCCTCTTCAGCCCGATGCCCTCAT
CTTTGACGGCCCTTCAGGCGGCAACTTCCACGACAGACTCGCGAAACCTC
GCAGGCACCACGGGAACATGGAATCGAGAAGGCTGGATCAAGGGATTCGA
AACTGCGCGGTCGGAGACCTCCTACGAGGTAAAGGACATAAAAGAGGGCA
GTATCCCGACCGACATCAGAGGAACGCTGTTCCGCAACGGACATGCCAAA
TTCGACGTGAATGGGCTGGAAATCGCGCATCCCTTCGATGGCGATGGGAT
GATTAGTGCTTTAACGTTCCAGGACGGTCGAGCATTTTTTCGCAACCGCT
TTGTCGAAACGGAGGGCTACAAACGGGAGCAGAAGAGTCAAAAAATCGAG
TACCGCGGTACCTTCGGAACTCAGAAGCCCGGGGGATGGCTCGCAAATAT
TTTCGATATGCGTCGTAAGAATGTGGCGAACACTAACGTGATCTTTTGGG
GCAATCGTTTGCTGGCTCTGTGGGAGGGCGGTCTCCCCCACCTGATGGAC
CCGATCACGCTGCAGACTCTGGGCGAGTCTCGGCTCGCTAATGTCCTCAA
ACGCAACCAAAACCTGTGCGCCCACCCGCGGTACGACCCGGCCACCGACC
GCTACGTCTTCTTCTCTACAGATCCAGACCCGCGGAAGACAAAGATTACT
CTCTACGAGTTCGACACGGACTTCAAGCTGGTGGCCGAGCGCTCGGAGAA
CCTCCAGGGCTTCTCCCTCCTGCACGACATGGTGATCACTCCCTCCTACT
ACGTTTTCTTCAAGGCCCCACTCGACCTACAACCCCTCCCATGGCTGCTC
GGCCGCACGGGCGTGGCCTCCTGCATCAGGTTCCAGGACGACCAGCCCGC
AGTTGCCTACCTGATCCCGCGCAACAACCCGAGCAGGCCCATGGTCGAGA
TCCCAGTGGACCCTCACTTTTCCTTCCACTTTTCCAACGCTTTTGACGAC
TCCTCGACGGGGGAGGTTGTGGTGGACATTATCCGCGTGCCCAAGCTCTA
CCTCACGGACACGAAGGGGGTCACCGGGGACCCGATCTGGCGCTCTGTCG
ACTACGAGCGCGACGTCCCAAAATCCACGCTCTGGCGCTACCGGCTGAAC
CCCGCTCAGGCCACGCACACAAAGGCAGAGCTCTGGGACTTGTACTGCGA
CTTTCCCTCCATCCCCGCCTCCCGCACAGGCCAGCCCTACCGCTACACGT
ACCTGGCCGCGGGCAGAGACCCAACAGTGCCGACGCCGGTGGGCGTGGTG
GCTAAGTTCGACGTGGAGTGTGGTCGGCTCGTTGACTCGTGGAGGGCCGA
GCCGCAGGAGTTCATCAGCGAGACGGTGGTGGTGCCCCGGCAGGGACACG
AGGAGCGAGGCGAGGGCCTGGAGGACGAGGGGTATCTGATGACCTATGTC
TTCAATGGGGAGACCTCCCTGTCGCAAGTTCTGATCTTTGACGTGCAGAA
GCTCGGAAAGGGGCCTGTGGCGCGACTGCAGCTTGATTCGAACATTCCTT
TGTCTTTACACGGGACGTGGGCGCCAGAAGCGGTGTACGATGGCGAAGAA
ATTCTGAGGAAGTTCACCCTCTTCACGGGCCTGAAGAAGTTTGAGAAGGT
AGAGAGTGGTATGGCGCCGATCTTTGAATTCTAG back to topprotein sequence of rna920 >rna920-protein ID=rna920-protein|Name=rna920|organism=Nannochloropsis gaditana|type=polypeptide|length=292bp
MEDTCEEEEGVLYVHCNRCQQVLSSFYKSSCGHCFCVECATAHFAKDPCC
PVCGLRLSQKHFRGPFDVGISIAEPIETIMFKNVFSSNRLDEVLQRALQS
LPAVEDVISLVTTQLYLENQRSQFQRERVERKWRKVRGDLKLTVQEARSK
IALLSSQLAEAEAWKRKLNDELATAKQEAHEFHRKNKSMEQILARLRNDG
HAIPSALSSPASTPPHHNQHRLAQAHHRPQQSFYPPPSPRLNSSSSKSVN
GLQFPSNQEHILKKAHKQTIGTEDNVAKCEKTLTEEQQETNR back to topmRNA from alignment at CM002456.1:730593..732459- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna920 ID=rna920|Name=rna920|organism=Nannochloropsis gaditana|type=mRNA|length=1867bp|location=Sequence derived from alignment at CM002456.1:730593..732459- (Nannochloropsis gaditana)
TATCATTTTTAACTGCAGTCCTTACAGTCTGGCGCCCTCAAATTATTCAT
GCTCCGCATTCACATTATTTCGTTAACACCTTCGCACGTTCTTTACAAAC
CCACCTTCATCATCATTCCTGCTCAGTATACTCAGGATAACGAATGGAAG
ACACTTGCGAGGAAGAAGAAGGTGTCTTATATGTACACTGCAATCGCTGT
CAGCAGGTGCTTTCATCCTTCTACAAGTCCTCGTGTGGGCATTGTTTCTG
CGTAGAATGTGCCACAGCCCATTTCGCCAAAGATCCATGCTGCCCGGTTT
GTGGCCTGCGTCTTTCTCAGAAACACTTTCGTGGACCATTTGATGTGGGC
ATCTCAATTGCAGAGCCTATTGAGACAATCATGTTCAAGAATGTCTTCAG
TTCTAACCGGCTTGACGAGGTACTTCAAAGGGCCCTTCAGTCCTTGCCTG
CCGTGGAGGACGTCATATCCCTCGTCACAACACAACTCTATTTGGAAAAT
CAACGTAGCCAATTCCAGCGGGAGAGAGTTGAGCGCAAATGGAGAAAAGT
ACGCGGGGACTTGAAGCTTACTGTTCAAGAAGCCCGCAGCAAGATCGCTC
TGCTCTCCTCCCAGCTCGCAGAGGCCGAAGCTTGGAAAAGAAAACTCAGT
GAGTAGAAGCATCAAGGCTCTTATGTTGATATGCTCCATTTGGTGATGGA
GCTCTTTATGTGCGAGCAACTTTTGGACATGATGGGAAGTTTTGTGAGCT
GCCTCCGTTAAAGTTTCCTCAATGTGACCACTTTCTTCGATAGACGATGA
ATTGGCCACAGCCAAGCAAGAGGCGCATGAATTTCATCGCAAGAACAAGT
CTATGGAGCAGGTGAGAACCAGTTAAAGGGTATTGCAAGAGGAAATGGAG
ACCTGAATAGGATTAGGATTTGAGCAATGACGTATCTTGTATCCCTCAGT
TTTCATATGGGACCTTGACATCAATCTTCAACACACTCTCTCGTACCTCT
AAGATCCTAGCACGGCTTCGCAATGATGGACATGCGATCCCATCAGCGCT
CTCCAGCCCTGCGTCGACCCCCCCGCATCACAATCAGCATAGGTTGGCCC
AGGCGCATCACCGCCCGCAGCAATCCTTCTACCCACCTCCCTCTCCTCGC
CTCAATTCTAGTAGCAGCAAGGTACAATAAAGCTGACAGATGATGTGGTA
TATTTCGCTTAAGCAAGCTTGTGAAGAATAAAATTTCTTTTCCTTTGCCC
GTCCCTTAATTAGTCTGTAAATGGGTTACAGTTCCCATCCAATCAGGAAC
AGTCGTATCGGCCTGCCTCGGCGACAGCTATCTCTCCACGCATTCCATCC
TATCCTTGCACCGGAGGAAGGAATGGAAAAGCAGTCGGAGGGAGTCCGCT
GGGTTTCAATCAGCCCAGCCCACAGCCGACTCCTCCGCGCTGCCTGAGCG
CCACCAATTCCCTTTCCCGCAGTCTTTCCCCGCATCATAGTCATGCGTTC
GCTCCGCCTATTAGCCCTTATTCCCCAGCTTCATCCTTCTCTACGTCTTC
ATTGAACAGTGGCCGTAATTTTGGAGGTGTGAGTGACTATCGGGCGCCCT
ACCAATGAAGAACGAACGTAGCAAGCTGCGGGCTAAGGAAAAGCGTACAT
CAAAATGATCACAGAATGTACAATGGACAAAATGGCCTACGAGTGCAACC
CTATAGCCCTTCAGAAAGGTAAACATGCAGCATGTCTACTATTATGTGTT
CATTCTTTTTAGGCAAGCATCCTAAAGAAAGCTCACAAGCAGACCATCGG
GACGGAAGATAACGTTGCTAAGTGTGAGAAGACATTAACAGAAGAGCAGC
AAGAGACCAATCGTTAA back to topCoding sequence (CDS) from alignment at CM002456.1:730593..732459- >rna920 ID=rna920|Name=rna920|organism=Nannochloropsis gaditana|type=CDS|length=4395bp|location=Sequence derived from alignment at CM002456.1:730593..732459- (Nannochloropsis gaditana)
CATCCTAAAGAAAGCTCACAAGCAGACCATCGGGACGGAAGATAACGTTG
CTAAGTGTGAGAAGACATTAACAGAAGAGCAGCAAGAGACCAATCGTTAA
TCTGTAAATGGGTTACAGTTCCCATCCAATCAGGAACAATCCTAGCACGG
CTTCGCAATGATGGACATGCGATCCCATCAGCGCTCTCCAGCCCTGCGTC
GACCCCCCCGCATCACAATCAGCATAGGTTGGCCCAGGCGCATCACCGCC
CGCAGCAATCCTTCTACCCACCTCCCTCTCCTCGCCTCAATTCTAGTAGC
AGCAAGACGATGAATTGGCCACAGCCAAGCAAGAGGCGCATGAATTTCAT
CGCAAGAACAAGTCTATGGAGCAGATGGAAGACACTTGCGAGGAAGAAGA
AGGTGTCTTATATGTACACTGCAATCGCTGTCAGCAGGTGCTTTCATCCT
TCTACAAGTCCTCGTGTGGGCATTGTTTCTGCGTAGAATGTGCCACAGCC
CATTTCGCCAAAGATCCATGCTGCCCGGTTTGTGGCCTGCGTCTTTCTCA
GAAACACTTTCGTGGACCATTTGATGTGGGCATCTCAATTGCAGAGCCTA
TTGAGACAATCATGTTCAAGAATGTCTTCAGTTCTAACCGGCTTGACGAG
GTACTTCAAAGGGCCCTTCAGTCCTTGCCTGCCGTGGAGGACGTCATATC
CCTCGTCACAACACAACTCTATTTGGAAAATCAACGTAGCCAATTCCAGC
GGGAGAGAGTTGAGCGCAAATGGAGAAAAGTACGCGGGGACTTGAAGCTT
ACTGTTCAAGAAGCCCGCAGCAAGATCGCTCTGCTCTCCTCCCAGCTCGC
AGAGGCCGAAGCTTGGAAAAGAAAACTCACATCCTAAAGAAAGCTCACAA
GCAGACCATCGGGACGGAAGATAACGTTGCTAAGTGTGAGAAGACATTAA
CAGAAGAGCAGCAAGAGACCAATCGTTAATCTGTAAATGGGTTACAGTTC
CCATCCAATCAGGAACAATCCTAGCACGGCTTCGCAATGATGGACATGCG
ATCCCATCAGCGCTCTCCAGCCCTGCGTCGACCCCCCCGCATCACAATCA
GCATAGGTTGGCCCAGGCGCATCACCGCCCGCAGCAATCCTTCTACCCAC
CTCCCTCTCCTCGCCTCAATTCTAGTAGCAGCAAGACGATGAATTGGCCA
CAGCCAAGCAAGAGGCGCATGAATTTCATCGCAAGAACAAGTCTATGGAG
CAGATGGAAGACACTTGCGAGGAAGAAGAAGGTGTCTTATATGTACACTG
CAATCGCTGTCAGCAGGTGCTTTCATCCTTCTACAAGTCCTCGTGTGGGC
ATTGTTTCTGCGTAGAATGTGCCACAGCCCATTTCGCCAAAGATCCATGC
TGCCCGGTTTGTGGCCTGCGTCTTTCTCAGAAACACTTTCGTGGACCATT
TGATGTGGGCATCTCAATTGCAGAGCCTATTGAGACAATCATGTTCAAGA
ATGTCTTCAGTTCTAACCGGCTTGACGAGGTACTTCAAAGGGCCCTTCAG
TCCTTGCCTGCCGTGGAGGACGTCATATCCCTCGTCACAACACAACTCTA
TTTGGAAAATCAACGTAGCCAATTCCAGCGGGAGAGAGTTGAGCGCAAAT
GGAGAAAAGTACGCGGGGACTTGAAGCTTACTGTTCAAGAAGCCCGCAGC
AAGATCGCTCTGCTCTCCTCCCAGCTCGCAGAGGCCGAAGCTTGGAAAAG
AAAACTCACATCCTAAAGAAAGCTCACAAGCAGACCATCGGGACGGAAGA
TAACGTTGCTAAGTGTGAGAAGACATTAACAGAAGAGCAGCAAGAGACCA
ATCGTTAATCTGTAAATGGGTTACAGTTCCCATCCAATCAGGAACAATCC
TAGCACGGCTTCGCAATGATGGACATGCGATCCCATCAGCGCTCTCCAGC
CCTGCGTCGACCCCCCCGCATCACAATCAGCATAGGTTGGCCCAGGCGCA
TCACCGCCCGCAGCAATCCTTCTACCCACCTCCCTCTCCTCGCCTCAATT
CTAGTAGCAGCAAGACGATGAATTGGCCACAGCCAAGCAAGAGGCGCATG
AATTTCATCGCAAGAACAAGTCTATGGAGCAGATGGAAGACACTTGCGAG
GAAGAAGAAGGTGTCTTATATGTACACTGCAATCGCTGTCAGCAGGTGCT
TTCATCCTTCTACAAGTCCTCGTGTGGGCATTGTTTCTGCGTAGAATGTG
CCACAGCCCATTTCGCCAAAGATCCATGCTGCCCGGTTTGTGGCCTGCGT
CTTTCTCAGAAACACTTTCGTGGACCATTTGATGTGGGCATCTCAATTGC
AGAGCCTATTGAGACAATCATGTTCAAGAATGTCTTCAGTTCTAACCGGC
TTGACGAGGTACTTCAAAGGGCCCTTCAGTCCTTGCCTGCCGTGGAGGAC
GTCATATCCCTCGTCACAACACAACTCTATTTGGAAAATCAACGTAGCCA
ATTCCAGCGGGAGAGAGTTGAGCGCAAATGGAGAAAAGTACGCGGGGACT
TGAAGCTTACTGTTCAAGAAGCCCGCAGCAAGATCGCTCTGCTCTCCTCC
CAGCTCGCAGAGGCCGAAGCTTGGAAAAGAAAACTCACATCCTAAAGAAA
GCTCACAAGCAGACCATCGGGACGGAAGATAACGTTGCTAAGTGTGAGAA
GACATTAACAGAAGAGCAGCAAGAGACCAATCGTTAATCTGTAAATGGGT
TACAGTTCCCATCCAATCAGGAACAATCCTAGCACGGCTTCGCAATGATG
GACATGCGATCCCATCAGCGCTCTCCAGCCCTGCGTCGACCCCCCCGCAT
CACAATCAGCATAGGTTGGCCCAGGCGCATCACCGCCCGCAGCAATCCTT
CTACCCACCTCCCTCTCCTCGCCTCAATTCTAGTAGCAGCAAGACGATGA
ATTGGCCACAGCCAAGCAAGAGGCGCATGAATTTCATCGCAAGAACAAGT
CTATGGAGCAGATGGAAGACACTTGCGAGGAAGAAGAAGGTGTCTTATAT
GTACACTGCAATCGCTGTCAGCAGGTGCTTTCATCCTTCTACAAGTCCTC
GTGTGGGCATTGTTTCTGCGTAGAATGTGCCACAGCCCATTTCGCCAAAG
ATCCATGCTGCCCGGTTTGTGGCCTGCGTCTTTCTCAGAAACACTTTCGT
GGACCATTTGATGTGGGCATCTCAATTGCAGAGCCTATTGAGACAATCAT
GTTCAAGAATGTCTTCAGTTCTAACCGGCTTGACGAGGTACTTCAAAGGG
CCCTTCAGTCCTTGCCTGCCGTGGAGGACGTCATATCCCTCGTCACAACA
CAACTCTATTTGGAAAATCAACGTAGCCAATTCCAGCGGGAGAGAGTTGA
GCGCAAATGGAGAAAAGTACGCGGGGACTTGAAGCTTACTGTTCAAGAAG
CCCGCAGCAAGATCGCTCTGCTCTCCTCCCAGCTCGCAGAGGCCGAAGCT
TGGAAAAGAAAACTCACATCCTAAAGAAAGCTCACAAGCAGACCATCGGG
ACGGAAGATAACGTTGCTAAGTGTGAGAAGACATTAACAGAAGAGCAGCA
AGAGACCAATCGTTAATCTGTAAATGGGTTACAGTTCCCATCCAATCAGG
AACAATCCTAGCACGGCTTCGCAATGATGGACATGCGATCCCATCAGCGC
TCTCCAGCCCTGCGTCGACCCCCCCGCATCACAATCAGCATAGGTTGGCC
CAGGCGCATCACCGCCCGCAGCAATCCTTCTACCCACCTCCCTCTCCTCG
CCTCAATTCTAGTAGCAGCAAGACGATGAATTGGCCACAGCCAAGCAAGA
GGCGCATGAATTTCATCGCAAGAACAAGTCTATGGAGCAGATGGAAGACA
CTTGCGAGGAAGAAGAAGGTGTCTTATATGTACACTGCAATCGCTGTCAG
CAGGTGCTTTCATCCTTCTACAAGTCCTCGTGTGGGCATTGTTTCTGCGT
AGAATGTGCCACAGCCCATTTCGCCAAAGATCCATGCTGCCCGGTTTGTG
GCCTGCGTCTTTCTCAGAAACACTTTCGTGGACCATTTGATGTGGGCATC
TCAATTGCAGAGCCTATTGAGACAATCATGTTCAAGAATGTCTTCAGTTC
TAACCGGCTTGACGAGGTACTTCAAAGGGCCCTTCAGTCCTTGCCTGCCG
TGGAGGACGTCATATCCCTCGTCACAACACAACTCTATTTGGAAAATCAA
CGTAGCCAATTCCAGCGGGAGAGAGTTGAGCGCAAATGGAGAAAAGTACG
CGGGGACTTGAAGCTTACTGTTCAAGAAGCCCGCAGCAAGATCGCTCTGC
TCTCCTCCCAGCTCGCAGAGGCCGAAGCTTGGAAAAGAAAACTCA back to top
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