EWM29781.1, cds920 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM29781.1 vs. NCBI_GenBank
Match: gi|585112361|gb|EWM29781.1| (conserved unknown protein [Nannochloropsis gaditana]) HSP 1 Score: 607.446 bits (1565), Expect = 0.000e+0 Identity = 292/292 (100.00%), Postives = 292/292 (100.00%), Query Frame = 0
Query: 1 MEDTCEEEEGVLYVHCNRCQQVLSSFYKSSCGHCFCVECATAHFAKDPCCPVCGLRLSQKHFRGPFDVGISIAEPIETIMFKNVFSSNRLDEVLQRALQSLPAVEDVISLVTTQLYLENQRSQFQRERVERKWRKVRGDLKLTVQEARSKIALLSSQLAEAEAWKRKLNDELATAKQEAHEFHRKNKSMEQILARLRNDGHAIPSALSSPASTPPHHNQHRLAQAHHRPQQSFYPPPSPRLNSSSSKSVNGLQFPSNQEHILKKAHKQTIGTEDNVAKCEKTLTEEQQETNR 292
MEDTCEEEEGVLYVHCNRCQQVLSSFYKSSCGHCFCVECATAHFAKDPCCPVCGLRLSQKHFRGPFDVGISIAEPIETIMFKNVFSSNRLDEVLQRALQSLPAVEDVISLVTTQLYLENQRSQFQRERVERKWRKVRGDLKLTVQEARSKIALLSSQLAEAEAWKRKLNDELATAKQEAHEFHRKNKSMEQILARLRNDGHAIPSALSSPASTPPHHNQHRLAQAHHRPQQSFYPPPSPRLNSSSSKSVNGLQFPSNQEHILKKAHKQTIGTEDNVAKCEKTLTEEQQETNR
Sbjct: 1 MEDTCEEEEGVLYVHCNRCQQVLSSFYKSSCGHCFCVECATAHFAKDPCCPVCGLRLSQKHFRGPFDVGISIAEPIETIMFKNVFSSNRLDEVLQRALQSLPAVEDVISLVTTQLYLENQRSQFQRERVERKWRKVRGDLKLTVQEARSKIALLSSQLAEAEAWKRKLNDELATAKQEAHEFHRKNKSMEQILARLRNDGHAIPSALSSPASTPPHHNQHRLAQAHHRPQQSFYPPPSPRLNSSSSKSVNGLQFPSNQEHILKKAHKQTIGTEDNVAKCEKTLTEEQQETNR 292
BLAST of EWM29781.1 vs. NCBI_GenBank
Match: gi|299470417|emb|CBN80178.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 63.1586 bits (152), Expect = 1.315e-7 Identity = 64/257 (24.90%), Postives = 101/257 (39.30%), Query Frame = 0
Query: 16 CNRC----------QQVLSSFYKSSCGHCFCVECATAHFAKDPCCPVCGLRLSQKHFRGPFDVGISIAEP--IETIMFKNVFSSNRLDEVLQRALQSLPAVEDVISLVTTQLYLENQRSQFQRERVERKWRKVRGDLKLTVQEARSKIALLSSQLAEAEAWKRKLNDELATAKQEAHEFHRKNKSMEQILARLRNDGHAIPSALSSPASTPPHHNQHRLAQAHHRPQQSFYPPPSPRLNS--SSSKSVNGLQFPSNQ 258
CN C Q+ S Y + CGH FC CA HF + CP CG L + + D+ + + EP + I+F+ Q AL++ + + + +Q+ LENQR ++ + K++ + + R++ A + E E R EL ++ E +RK ++ E+ A LR+ +T P F PP SPR + S S NG Q S Q
Sbjct: 15 CNMCWNPHPVALPRQEGTGSCYVTRCGHLFCESCAFRHFGQSQACPTCGHGLDESEIQ---DLTLGL-EPSSLRRIVFEEALKEPNHHSSSQAALRTAELANETLGFLFSQMLLENQRGAEATSVLKGEVAKLKHEQGRVTMQMRNQNAAADQKHREMEHKLRVRTKELVDLQEAYKEKNRKCQAWEKAYANLRSQ------------TTDPSRG------------GGFTPPESPRAGAMRGPSGSFNGGQGGSMQ 243 The following BLAST results are available for this feature:
BLAST of EWM29781.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 2
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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