rna9198, rna9198 (mRNA) Nannochloropsis gaditana

Overview
Namerna9198
Unique Namerna9198
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length612
Alignment locationKK037252.1:82789..84642 -

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Properties
Property NameValue
ProductMitotic checkpoint protein PRCC
Orig transcript idgnl|cribi|Naga_100019g72.498.mrna
Orig protein idgnl|cribi|Naga_100019g72.498
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037252.1supercontigKK037252.1:82789..84642 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100019g72gene8923Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna9198rna9198-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM21476.1cds9168Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna9198 ID=rna9198|Name=rna9198|organism=Nannochloropsis gaditana|type=mRNA|length=612bp
ATGATCGAACTGGACGTGTGCTTAGACCGGAGCGGAGAGGTGATCGTCCA
CCACGACCGGTACCTTCCCGACGGCCGCCTCCTCGAGAACCTGGCCCTGG
CCCAGATCAAGCGTGTCGATCCCGCGGTGGAGCCCCTGGCGCGGGTGCTC
GCCGACCTGCGGGCCTCGGGCGTCTCGCTCTACCTGGACATCAAGACGGA
CAGGGTCGTCGCGCCGCTCATGCGCCTCTTGCACGAGGCCATCGCTCAGA
AAGGATGGGCGCCCTCGCGGCTTCTGGTCGCAAGCTTCAATCAGTATGAC
ATGATCGAGGTGAACGCTCACCGGCTCGCCTACCCGGCCACCCTCGCGGC
CTTGCAGACCTGCATCATCGTGGACGGGGTGCCCATCTCCTTCGCCAAGG
AGTACGCGGCCTTGGGTGTGCACTGGTGCTCCATCGGGGACGGATGCGTG
TTGCCGTCCTTTTTGGAGGACGCTCACCGGAGGGGCATCGGCGTGATGGT
CTGGACGGTCAACAATGCCAGGTGGGGGAGGTCGACGAGGCCGGGGAGGG
GCCTGGAGGCAGGGACGGCGCCGGAAAAGGGCAGACTAGGTGTTCTAGGT
TCGGGTAACTAA
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protein sequence of rna9198

>rna9198-protein ID=rna9198-protein|Name=rna9198|organism=Nannochloropsis gaditana|type=polypeptide|length=504bp
MSLLGVDYGSDSEEDRPFAPPAPRPDPPVSPATTLSVSGTTAGNAPGSDS
ISTADSGQGEKHRRKKRKVKVAVSILPSHIQAALMRAAPLRRSTGQKEGP
VTGVSDDEDDENDYADEVERKELDEEELERRRRIREQVAESKAVAKRQAA
GATGLFALLPKPKVEKAMEKALKKSGDSAAEKKKDKGANMEADAVAVMGA
ASDKKEEGGDQGASSESDGAEEEKEEEEEEEEKEEEGLGLLHSSLMAGAT
AAALPRVSISQGMRGLAIPAPTAPAAAVGAEIRQPSTSLSVAASSELPAS
GSTGTMGHGAATSGLGESVGSREPQAYASYGGLWQGQENERAMRAHRAEL
DAYYAAEASRQPPLQMSPGSCLQPHAQEDDFEVPLSEQGSRRQKQRLQRE
LAAGNLSAVSKLGGQVVEVARREESWDPYRYGPPKKKEKVSIAATFYDTK
TGETVTTTEASRTHKRRHQINTLAIQAAEREADLLEGKARSMQSKAQTQG
KYGW
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mRNA from alignment at KK037252.1:82789..84642-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna9198 ID=rna9198|Name=rna9198|organism=Nannochloropsis gaditana|type=mRNA|length=1854bp|location=Sequence derived from alignment at KK037252.1:82789..84642- (Nannochloropsis gaditana)
AAAGCAGGTATGTCCTTGCTGGGCGTGGACTATGGAAGTGACTCGGAAGA
AGACCGTCCTTTTGCCCCTCCTGCACCCCGGCCCGACCCTCCTGTCTCTC
CTGCTACTACTTTGTCGGTCTCAGGAACCACGGCGGGGAACGCGCCTGGC
TCCGACTCGATCAGTACTGCTGACTCTGGACAGGGAGAAAAGCATAGGAG
GAAGAAAAGAAAGGTCAAGGTGGCTGTGTCCATCCTCCCGTCCCATATTC
AGGCCGCTCTGATGAGGGCAGCGCCCTTGCGACGGAGCACAGGCCAGAAA
GAGGGACCAGTGACAGGCGTCTCTGATGACGAGGATGACGAAAATGACTA
TGCGGATGAGGTGGAGAGGAAGGAACTCGATGAAGAGGTAGGTAGGAGAG
GCGAGAGGAATGCGATCGCGTTGCTCCTGGTCTGTCACGTGCGGCCCTTT
GCATATTTGACTAATGAAGTATTGGAGCGTGTCCTGCTACGTAGGGTAAA
TGGTGCACTGGCTTTGTCAAACGTGGGCGAGGAGAGAGATTGAAACGACG
ATGGCCAAACCCTCGCAGTAGAGTAGCAATTCGCTCCCATACTCTCCAGT
CCCCGGTACCCCTTATCGCTACAACCTCGTCTTTTTCATTTTCATCATGT
GTAGGAGCTGGAACGACGTCGCAGAATCCGTGAACAGGTGGCAGAAAGCA
AAGCCGTCGCGAAGAGGCAGGCCGCCGGCGCTACGGGGCTATTTGCTCTC
CTTCCGAAGCCCAAAGTGGAGAAGGCAATGGAGAAAGCGTTGAAGAAGAG
TGGTGACTCGGCCGCGGAGAAGAAGAAAGATAAGGGGGCGAATATGGAGG
CGGATGCAGTCGCTGTCATGGGGGCTGCGTCGGACAAGAAAGAGGAGGGG
GGCGACCAGGGAGCATCGAGTGAGAGCGATGGGGCGGAGGAGGAGAAGGA
GGAGGAGGAGGAGGAGGAGGAGAAGGAAGAGGAAGGGCTCGGGCTTCTCC
ACTCCTCCCTCATGGCAGGCGCCACAGCCGCCGCTCTTCCCCGCGTATCC
ATCTCTCAGGGAATGCGCGGCCTAGCCATCCCGGCGCCGACAGCACCGGC
GGCTGCGGTGGGAGCAGAGATAAGGCAGCCGTCCACTAGCCTCAGTGTGG
CAGCGTCGTCTGAGCTCCCTGCTTCTGGTTCGACAGGGACGATGGGTCAT
GGCGCGGCGACCTCGGGCCTCGGGGAGTCCGTTGGGTCGAGAGAGCCGCA
AGCTTACGCCTCCTATGGAGGGCTTTGGCAGGGACAGGAGAATGAACGGG
CAATGAGGGCGCACCGAGCAGAGTTGGATGCCTACTACGCCGCCGAGGCG
TCACGACAACCCCCGCTGCAGATGAGTCCGGGTTCCTGTCTGCAGCCTCA
TGCGCAGGAGGACGATTTTGAAGTACCTCTTTCAGAGCAGGGTTCTCGGA
GGCAAAAACAGCGCTTACAGAGAGAGTTGGCGGCAGGGAATTTGTCCGCT
GTCAGCAAGCTCGGAGGACAGGTCGTAGAGGTGGCGCGTCGGGAGGAAAG
CTGGGATCCGTACCGGTATGGCCCTCCCAAAAAGAAGGAGAAGGTCTCAA
TTGCCGCTACCTTTTACGATACAAAAACTGGAGAAACGGTCACGACCACA
GAGGCTTCTCGAACGCACAAAAGAAGACATCAGATAAATACGTTGGCAAT
ACAAGCAGCTGAGCGGGAGGCGGATCTCTTGGAAGGGAAGGCGCGCAGCA
TGCAAAGTAAAGCCCAGACCCAGGGCAAATATGGGTGGTGAAGTTTTTTT
CTTATTTTGGTTTTAAAATTGCCATGAGAAAGAAAGAATAGAATCCGTTC
GTCC
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Coding sequence (CDS) from alignment at KK037252.1:82789..84642-

>rna9198 ID=rna9198|Name=rna9198|organism=Nannochloropsis gaditana|type=CDS|length=3030bp|location=Sequence derived from alignment at KK037252.1:82789..84642- (Nannochloropsis gaditana)
GAGCTGGAACGACGTCGCAGAATCCGTGAACAGGTGGCAGAAAGCAAAGC
CGTCGCGAAGAGGCAGGCCGCCGGCGCTACGGGGCTATTTGCTCTCCTTC
CGAAGCCCAAAGTGGAGAAGGCAATGGAGAAAGCGTTGAAGAAGAGTGGT
GACTCGGCCGCGGAGAAGAAGAAAGATAAGGGGGCGAATATGGAGGCGGA
TGCAGTCGCTGTCATGGGGGCTGCGTCGGACAAGAAAGAGGAGGGGGGCG
ACCAGGGAGCATCGAGTGAGAGCGATGGGGCGGAGGAGGAGAAGGAGGAG
GAGGAGGAGGAGGAGGAGAAGGAAGAGGAAGGGCTCGGGCTTCTCCACTC
CTCCCTCATGGCAGGCGCCACAGCCGCCGCTCTTCCCCGCGTATCCATCT
CTCAGGGAATGCGCGGCCTAGCCATCCCGGCGCCGACAGCACCGGCGGCT
GCGGTGGGAGCAGAGATAAGGCAGCCGTCCACTAGCCTCAGTGTGGCAGC
GTCGTCTGAGCTCCCTGCTTCTGGTTCGACAGGGACGATGGGTCATGGCG
CGGCGACCTCGGGCCTCGGGGAGTCCGTTGGGTCGAGAGAGCCGCAAGCT
TACGCCTCCTATGGAGGGCTTTGGCAGGGACAGGAGAATGAACGGGCAAT
GAGGGCGCACCGAGCAGAGTTGGATGCCTACTACGCCGCCGAGGCGTCAC
GACAACCCCCGCTGCAGATGAGTCCGGGTTCCTGTCTGCAGCCTCATGCG
CAGGAGGACGATTTTGAAGTACCTCTTTCAGAGCAGGGTTCTCGGAGGCA
AAAACAGCGCTTACAGAGAGAGTTGGCGGCAGGGAATTTGTCCGCTGTCA
GCAAGCTCGGAGGACAGGTCGTAGAGGTGGCGCGTCGGGAGGAAAGCTGG
GATCCGTACCGGTATGGCCCTCCCAAAAAGAAGGAGAAGGTCTCAATTGC
CGCTACCTTTTACGATACAAAAACTGGAGAAACGGTCACGACCACAGAGG
CTTCTCGAACGCACAAAAGAAGACATCAGATAAATACGTTGGCAATACAA
GCAGCTGAGCGGGAGGCGGATCTCTTGGAAGGGAAGGCGCGCAGCATGCA
AAGTAAAGCCCAGACCCAGGGCAAATATGGGTGGTGAATGTCCTTGCTGG
GCGTGGACTATGGAAGTGACTCGGAAGAAGACCGTCCTTTTGCCCCTCCT
GCACCCCGGCCCGACCCTCCTGTCTCTCCTGCTACTACTTTGTCGGTCTC
AGGAACCACGGCGGGGAACGCGCCTGGCTCCGACTCGATCAGTACTGCTG
ACTCTGGACAGGGAGAAAAGCATAGGAGGAAGAAAAGAAAGGTCAAGGTG
GCTGTGTCCATCCTCCCGTCCCATATTCAGGCCGCTCTGATGAGGGCAGC
GCCCTTGCGACGGAGCACAGGCCAGAAAGAGGGACCAGTGACAGGCGTCT
CTGATGACGAGGATGACGAAAATGACTATGCGGATGAGGTGGAGAGGAAG
GAACTCGATGAAGAGGAGCTGGAACGACGTCGCAGAATCCGTGAACAGGT
GGCAGAAAGCAAAGCCGTCGCGAAGAGGCAGGCCGCCGGCGCTACGGGGC
TATTTGCTCTCCTTCCGAAGCCCAAAGTGGAGAAGGCAATGGAGAAAGCG
TTGAAGAAGAGTGGTGACTCGGCCGCGGAGAAGAAGAAAGATAAGGGGGC
GAATATGGAGGCGGATGCAGTCGCTGTCATGGGGGCTGCGTCGGACAAGA
AAGAGGAGGGGGGCGACCAGGGAGCATCGAGTGAGAGCGATGGGGCGGAG
GAGGAGAAGGAGGAGGAGGAGGAGGAGGAGGAGAAGGAAGAGGAAGGGCT
CGGGCTTCTCCACTCCTCCCTCATGGCAGGCGCCACAGCCGCCGCTCTTC
CCCGCGTATCCATCTCTCAGGGAATGCGCGGCCTAGCCATCCCGGCGCCG
ACAGCACCGGCGGCTGCGGTGGGAGCAGAGATAAGGCAGCCGTCCACTAG
CCTCAGTGTGGCAGCGTCGTCTGAGCTCCCTGCTTCTGGTTCGACAGGGA
CGATGGGTCATGGCGCGGCGACCTCGGGCCTCGGGGAGTCCGTTGGGTCG
AGAGAGCCGCAAGCTTACGCCTCCTATGGAGGGCTTTGGCAGGGACAGGA
GAATGAACGGGCAATGAGGGCGCACCGAGCAGAGTTGGATGCCTACTACG
CCGCCGAGGCGTCACGACAACCCCCGCTGCAGATGAGTCCGGGTTCCTGT
CTGCAGCCTCATGCGCAGGAGGACGATTTTGAAGTACCTCTTTCAGAGCA
GGGTTCTCGGAGGCAAAAACAGCGCTTACAGAGAGAGTTGGCGGCAGGGA
ATTTGTCCGCTGTCAGCAAGCTCGGAGGACAGGTCGTAGAGGTGGCGCGT
CGGGAGGAAAGCTGGGATCCGTACCGGTATGGCCCTCCCAAAAAGAAGGA
GAAGGTCTCAATTGCCGCTACCTTTTACGATACAAAAACTGGAGAAACGG
TCACGACCACAGAGGCTTCTCGAACGCACAAAAGAAGACATCAGATAAAT
ACGTTGGCAATACAAGCAGCTGAGCGGGAGGCGGATCTCTTGGAAGGGAA
GGCGCGCAGCATGCAAAGTAAAGCCCAGACCCAGGGCAAATATGGGTGGT
GAATGTCCTTGCTGGGCGTGGACTATGGAAGTGACTCGGAAGAAGACCGT
CCTTTTGCCCCTCCTGCACCCCGGCCCGACCCTCCTGTCTCTCCTGCTAC
TACTTTGTCGGTCTCAGGAACCACGGCGGGGAACGCGCCTGGCTCCGACT
CGATCAGTACTGCTGACTCTGGACAGGGAGAAAAGCATAGGAGGAAGAAA
AGAAAGGTCAAGGTGGCTGTGTCCATCCTCCCGTCCCATATTCAGGCCGC
TCTGATGAGGGCAGCGCCCTTGCGACGGAGCACAGGCCAGAAAGAGGGAC
CAGTGACAGGCGTCTCTGATGACGAGGATGACGAAAATGACTATGCGGAT
GAGGTGGAGAGGAAGGAACTCGATGAAGAG
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Synonyms
Publications