EWM21476.1, cds9168 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM21476.1 vs. NCBI_GenBank
Match: gi|585101706|gb|EWM21476.1| (Mitotic checkpoint protein PRCC [Nannochloropsis gaditana]) HSP 1 Score: 1007.67 bits (2604), Expect = 0.000e+0 Identity = 504/504 (100.00%), Postives = 504/504 (100.00%), Query Frame = 0
Query: 1 MSLLGVDYGSDSEEDRPFAPPAPRPDPPVSPATTLSVSGTTAGNAPGSDSISTADSGQGEKHRRKKRKVKVAVSILPSHIQAALMRAAPLRRSTGQKEGPVTGVSDDEDDENDYADEVERKELDEEELERRRRIREQVAESKAVAKRQAAGATGLFALLPKPKVEKAMEKALKKSGDSAAEKKKDKGANMEADAVAVMGAASDKKEEGGDQGASSESDGAEEEKEEEEEEEEKEEEGLGLLHSSLMAGATAAALPRVSISQGMRGLAIPAPTAPAAAVGAEIRQPSTSLSVAASSELPASGSTGTMGHGAATSGLGESVGSREPQAYASYGGLWQGQENERAMRAHRAELDAYYAAEASRQPPLQMSPGSCLQPHAQEDDFEVPLSEQGSRRQKQRLQRELAAGNLSAVSKLGGQVVEVARREESWDPYRYGPPKKKEKVSIAATFYDTKTGETVTTTEASRTHKRRHQINTLAIQAAEREADLLEGKARSMQSKAQTQGKYGW 504
MSLLGVDYGSDSEEDRPFAPPAPRPDPPVSPATTLSVSGTTAGNAPGSDSISTADSGQGEKHRRKKRKVKVAVSILPSHIQAALMRAAPLRRSTGQKEGPVTGVSDDEDDENDYADEVERKELDEEELERRRRIREQVAESKAVAKRQAAGATGLFALLPKPKVEKAMEKALKKSGDSAAEKKKDKGANMEADAVAVMGAASDKKEEGGDQGASSESDGAEEEKEEEEEEEEKEEEGLGLLHSSLMAGATAAALPRVSISQGMRGLAIPAPTAPAAAVGAEIRQPSTSLSVAASSELPASGSTGTMGHGAATSGLGESVGSREPQAYASYGGLWQGQENERAMRAHRAELDAYYAAEASRQPPLQMSPGSCLQPHAQEDDFEVPLSEQGSRRQKQRLQRELAAGNLSAVSKLGGQVVEVARREESWDPYRYGPPKKKEKVSIAATFYDTKTGETVTTTEASRTHKRRHQINTLAIQAAEREADLLEGKARSMQSKAQTQGKYGW
Sbjct: 1 MSLLGVDYGSDSEEDRPFAPPAPRPDPPVSPATTLSVSGTTAGNAPGSDSISTADSGQGEKHRRKKRKVKVAVSILPSHIQAALMRAAPLRRSTGQKEGPVTGVSDDEDDENDYADEVERKELDEEELERRRRIREQVAESKAVAKRQAAGATGLFALLPKPKVEKAMEKALKKSGDSAAEKKKDKGANMEADAVAVMGAASDKKEEGGDQGASSESDGAEEEKEEEEEEEEKEEEGLGLLHSSLMAGATAAALPRVSISQGMRGLAIPAPTAPAAAVGAEIRQPSTSLSVAASSELPASGSTGTMGHGAATSGLGESVGSREPQAYASYGGLWQGQENERAMRAHRAELDAYYAAEASRQPPLQMSPGSCLQPHAQEDDFEVPLSEQGSRRQKQRLQRELAAGNLSAVSKLGGQVVEVARREESWDPYRYGPPKKKEKVSIAATFYDTKTGETVTTTEASRTHKRRHQINTLAIQAAEREADLLEGKARSMQSKAQTQGKYGW 504
BLAST of EWM21476.1 vs. NCBI_GenBank
Match: gi|553196129|ref|XP_005856276.1| (hypothetical protein NGA_2119710, partial [Nannochloropsis gaditana CCMP526] >gi|422292790|gb|EKU20092.1| hypothetical protein NGA_2119710, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 494.197 bits (1271), Expect = 2.336e-172 Identity = 243/244 (99.59%), Postives = 243/244 (99.59%), Query Frame = 0
Query: 260 SQGMRGLAIPAPTAPAAAVGAEIRQPSTSLSVAASSELPASGSTGTMGHGAATSGLGESVGSREPQAYASYGGLWQGQENERAMRAHRAELDAYYAAEASRQPPLQMSPGSCLQPHAQEDDFEVPLSEQGSRRQKQRLQRELAAGNLSAVSKLGGQVVEVARREESWDPYRYGPPKKKEKVSIAATFYDTKTGETVTTTEASRTHKRRHQINTLAIQAAEREADLLEGKARSMQSKAQTQGKYG 503
SQGMRGLAIPAPTAPAAAVGAEIRQPSTSLSVAASSELPASGSTGTMGHGAATSGLGESVGSREPQAYASYGGLWQGQENERAMRAHRAELDAYYAAEASRQPPLQMS GSCLQPHAQEDDFEVPLSEQGSRRQKQRLQRELAAGNLSAVSKLGGQVVEVARREESWDPYRYGPPKKKEKVSIAATFYDTKTGETVTTTEASRTHKRRHQINTLAIQAAEREADLLEGKARSMQSKAQTQGKYG
Sbjct: 1 SQGMRGLAIPAPTAPAAAVGAEIRQPSTSLSVAASSELPASGSTGTMGHGAATSGLGESVGSREPQAYASYGGLWQGQENERAMRAHRAELDAYYAAEASRQPPLQMSLGSCLQPHAQEDDFEVPLSEQGSRRQKQRLQRELAAGNLSAVSKLGGQVVEVARREESWDPYRYGPPKKKEKVSIAATFYDTKTGETVTTTEASRTHKRRHQINTLAIQAAEREADLLEGKARSMQSKAQTQGKYG 244
BLAST of EWM21476.1 vs. NCBI_GenBank
Match: gi|299470045|emb|CBN79222.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 81.2629 bits (199), Expect = 1.957e-13 Identity = 49/120 (40.83%), Postives = 70/120 (58.33%), Query Frame = 0
Query: 390 SRRQKQRLQRELAAGNLSAVSKLGGQ--VVEVARREESWDPYRYGPPK---KKEKVSIAATFYDTKTGETVTTTEASRTHKRRHQINTLAIQAAEREADLLEGKARSMQSKAQTQGKYGW 504
+RR+ + ++R LA GNL A LG + V+++ + ++P R P +E+ I ++ YD TG+TV T E + KR+HQIN LA QAA E DL+E S +KAQT KYGW
Sbjct: 163 TRRKGRDMERALARGNLGA---LGSEMPVMDLEQGSNEYNPLRTKPTTAAMNQEQKHIESSVYDPSTGKTVKTLEPTSMQKRKHQINQLAAQAASMERDLMERSGASRLTKAQTHAKYGW 279
BLAST of EWM21476.1 vs. NCBI_GenBank
Match: gi|325190497|emb|CCA24996.1| (conserved hypothetical protein [Albugo laibachii Nc14]) HSP 1 Score: 72.7886 bits (177), Expect = 9.641e-11 Identity = 47/139 (33.81%), Postives = 77/139 (55.40%), Query Frame = 0
Query: 373 QPHAQEDDFEVPLSEQGSRRQKQRL-----QRELAAGNLSAVSKLGGQVVEVARRE-ESWDP-YRYGPPKKKEKVSIAATFYDTKTGETVTTTEASRTHKRRHQINTLAIQAAEREADLLEGKARSMQSKAQTQGKYGW 504
QP+ Q E + + S R + RL +R L G A+S + EV + +SW P KKE+V++AA+F++ + G V++ + +R +++HQ+N LA A RE DLL K +++++A+TQ KYGW
Sbjct: 125 QPYMQHYSGERMIKDAASNRTRARLNERALERALEKGQFDALSP-DLPIKEVQGPDGDSWKPTIEMIEAIKKEEVNVAASFWNARVGGRVSSIKPTRLQRQKHQLNQLAFDARAREQDLLNKKGLAIKTRAETQAKYGW 262
BLAST of EWM21476.1 vs. NCBI_GenBank
Match: gi|635359260|emb|CCI50628.1| (unnamed protein product [Albugo candida]) HSP 1 Score: 72.0182 bits (175), Expect = 2.000e-10 Identity = 43/116 (37.07%), Postives = 71/116 (61.21%), Query Frame = 0
Query: 392 RQKQR-LQRELAAGNLSAVSKLGGQVVEVARRE-ESWDPY-RYGPPKKKEKVSIAATFYDTKTGETVTTTEASRTHKRRHQINTLAIQAAEREADLLEGKARSMQSKAQTQGKYGW 504
R K+R L+R L G A+S + EV + +SW P KKE+V++AA+F++++ G V++ + +R +++HQ+N LA A RE DLL K +++++A+TQ KYGW
Sbjct: 148 RLKERALERALEKGQFDALSS-DLPIKEVQGPDGDSWKPTTEMIEAIKKEEVNVAASFWNSRVGGKVSSMKPTRLQRQKHQLNQLAFDARAREEDLLNKKGLAIKTRAETQAKYGW 262
BLAST of EWM21476.1 vs. NCBI_GenBank
Match: gi|1173945976|gb|OQR94552.1| (hypothetical protein ACHHYP_01151 [Achlya hypogyna]) HSP 1 Score: 70.4774 bits (171), Expect = 5.347e-10 Identity = 46/145 (31.72%), Postives = 76/145 (52.41%), Query Frame = 0
Query: 365 QMSPGSCLQPHAQEDDFEVPLSEQGSRRQKQRLQRELAAGNLSAVSKLGGQVVEVA-RREESWDPYRYGP----PKKKEKVSIAATFYDTKTGETVTTTEASRTHKRRHQINTLAIQAAEREADLLEGKARSMQSKAQTQGKYGW 504
+ PG+C+ E + PL + +R ++++L+R L GN AV+ +VV+V ++W P G ++ +V +T+ G V + SR ++RHQ+N L A RE DLL+ K +++SK +TQ KYGW
Sbjct: 121 HLVPGACVL----ESKHKRPLQGKRARNKERQLERMLQQGNFDAVA---NKVVDVTGAAPDAWKPSNDGSMLFAADREAQVLAEMAGTETENGYVVASYRPSRLQRQRHQLNQLTFDAKLREFDLLDKKGLALKSKRETQAKYGW 258
BLAST of EWM21476.1 vs. NCBI_GenBank
Match: gi|697890789|ref|XP_009690636.1| (conserved hypothetical protein [Theileria orientalis strain Shintoku] >gi|403222203|dbj|BAM40335.1| conserved hypothetical protein [Theileria orientalis strain Shintoku]) HSP 1 Score: 68.9366 bits (167), Expect = 3.109e-9 Identity = 31/68 (45.59%), Postives = 47/68 (69.12%), Query Frame = 0
Query: 437 KEKVSIAATFYDTKTGETVTTTEASRTHKRRHQINTLAIQAAEREADLLEGKARSMQSKAQTQGKYGW 504
K+K ++A ++ G+ +TT A RT KR+HQIN LA++A ++EA++LE A +SK +TQ KYGW
Sbjct: 228 KKKFTLATKLMESDDGQVITTNVARRTQKRKHQINWLAMEAQDKEAEILERTAHMRKSKRETQMKYGW 295
BLAST of EWM21476.1 vs. NCBI_GenBank
Match: gi|567994257|gb|ETL44418.1| (hypothetical protein L916_05284 [Phytophthora parasitica] >gi|570955811|gb|ETP20898.1| hypothetical protein F441_05478 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 67.3958 bits (163), Expect = 1.550e-8 Identity = 40/136 (29.41%), Postives = 73/136 (53.68%), Query Frame = 0
Query: 382 EVPLSEQGSRRQKQR-LQRELAAGNLSAVSKLGGQVVEVARREESWDPYRYGPP------------KKKEKVSIAATFYDTKTGETVTTTEASRTHKRRHQINTLAIQAAEREADLLEGKARSMQSKAQTQGKYGW 504
+VP RR ++R ++R L G+ V+ Q+ EV + P + PP +++ + A+F++++ G TV++++ SR +++HQ+N LA A R+ DLLE + S+++K +T KYGW
Sbjct: 212 DVPGGSSKRRRTRERDIERALQQGHFETVAD---QITEV----QGPAPNAWQPPVDPLTGASGAKGSSDQEMKLKASFWNSQAGTTVSSSKPSRLQRQKHQLNQLAFDAKARDFDLLEKRGASLKTKRETYAKYGW 340
BLAST of EWM21476.1 vs. NCBI_GenBank
Match: gi|301097467|ref|XP_002897828.1| (conserved hypothetical protein [Phytophthora infestans T30-4] >gi|262106576|gb|EEY64628.1| conserved hypothetical protein [Phytophthora infestans T30-4]) HSP 1 Score: 66.2402 bits (160), Expect = 1.664e-8 Identity = 45/136 (33.09%), Postives = 76/136 (55.88%), Query Frame = 0
Query: 378 EDDFEVPLSEQGSRRQKQR-LQRELAAGNLSAVSKLGGQVVEV-ARREESWDPY---RYGPPKKK----EKVSIAATFYDTKTGETVTTTEASRTHKRRHQINTLAIQAAEREADLLEGKARSMQSKAQTQGKYGW 504
EDD VP RR ++R ++R L G+ V+ Q+ EV +W P R G K +++ + A+F++++ G TV++++ SR ++RHQ+N LA A R+ +LLE + S+++K +T KYGW
Sbjct: 140 EDD--VPGGSSKRRRTRERDIERALQQGHFETVAD---QIREVQGPVSHAWQPPVDPRTGDRGVKGSSDQEIKVNASFWNSQAGTTVSSSKPSRLQRQRHQLNQLAFDAKVRDFELLEKRGASLKTKRETYAKYGW 270
BLAST of EWM21476.1 vs. NCBI_GenBank
Match: gi|570990976|gb|ETP48838.1| (hypothetical protein F442_05519 [Phytophthora parasitica P10297]) HSP 1 Score: 67.0106 bits (162), Expect = 1.744e-8 Identity = 40/136 (29.41%), Postives = 73/136 (53.68%), Query Frame = 0
Query: 382 EVPLSEQGSRRQKQR-LQRELAAGNLSAVSKLGGQVVEVARREESWDPYRYGPP------------KKKEKVSIAATFYDTKTGETVTTTEASRTHKRRHQINTLAIQAAEREADLLEGKARSMQSKAQTQGKYGW 504
+VP RR ++R ++R L G+ V+ Q+ EV + P + PP +++ + A+F++++ G TV++++ SR +++HQ+N LA A R+ DLLE + S+++K +T KYGW
Sbjct: 212 DVPGGSSKRRRTRERDIERALQQGHFETVAD---QITEV----QGPAPNAWQPPVDPLTGASGAKGSSDQEMKLKASFWNSQAGTTVSSSKPSRLQRQKHQLNQLAFDAKARDFDLLEKRGASLKTKRETYAKYGW 340 The following BLAST results are available for this feature:
BLAST of EWM21476.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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