rna9197, rna9197 (mRNA) Nannochloropsis gaditana

Overview
Namerna9197
Unique Namerna9197
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1242
Alignment locationKK037252.1:80837..81448 -

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Properties
Property NameValue
Productglycerophosphoryl diester phosphodiesterase
Orig transcript idgnl|cribi|Naga_100019g73.484.mrna
Orig protein idgnl|cribi|Naga_100019g73.484
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037252.1supercontigKK037252.1:80837..81448 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100019g73gene8922Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM21462.1cds9167Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna9197rna9197-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna9197 ID=rna9197|Name=rna9197|organism=Nannochloropsis gaditana|type=mRNA|length=1242bp
ATGCGCCGGTATGCGGACCTCGGCGTAGACGCCCTGGTCACGGACTTCCC
CGAGCGCTTCGTTGCAGTGCGACAGGAGGGAGAGGAGGCCCTGCGCGTCG
CACAAAAGGCAGCCGGGAGAGGCGGGGGGGTGGGAGAGGATGCGGAGGGT
CGGGAGGGGAAGGAAAGGGGTCGAGGCCCCGCCTGCGAGGAGGGGGGGGA
CGGCGCGTGGGCGCAGGACCCGCGGGGGGTACCAGGGGCATCCTGCCAAG
ACGTGGCGGGTGCGAGGGCGCTGCATCGCGAGTCTCAGGTCATGTCAGCC
GCGTATCCTGGCCCCCTCCATCAACCGCGCCGGCGCCTTGTCAAGGCGCT
GCGCCACGCCTGGCCCCTGCTCCGGGCCCTGGAAGGTCGATCACGGGATC
CCACGGCCCGATGCAACGACGAGGAGAAGACCGGAGGGATGCTGCCAGCC
TTGCTGGGGGAGGGGACGAGGGAAGGCCCGGTCTGGCATTTGCAGCTGGC
GGCGCGGCAAGCGGAAGAGTCTGCGACAGCGGTATTGAAGCCCCGCTTGC
CCCGACGTCGACGGGGCTGGACCCAGGCGGTGGACAGTGAGAGGGTCAGG
AACGTGCAGGAATCCCTACCCACGACGCTCGAGAAGGGGGGGGCAAAGCG
CGGTGGGCGAGGGCAGGGGGGTTGGTCTTGTACGGAGGCTCCGGAGAGCT
CGAAGGTCCTGGACCCGTTCCCCTTGTCGGCCACAGGAGAGGATGGGAAA
GGCGGGTATGGGCACAGCTGTGATAGGGGAGAGGCACCCGACGGGCCGCC
AGGGAGTCGGTGTCGTGGTCAGCGCGAGGGGGTTGTCTGGTTTCTATTAG
CATTGGAGCACGTCGCACGGTGTGATGTGGAGCTGTGTGAAGTCGGTGAG
GGAACTTTGCAGAGTGTGACTGGCTCCCAGGGTAGCGGCAGAAACAGCAT
CGGCCCCTTGCGCACCGAGGGTGTGATAGTCGCGCGTGTCGTCGAGCGTC
TTCTCATTCGACACGAGGGGGCAGAGTCCGGCCCGCGTCGCACTTACCTC
TTCCCCTTTCCCGGCGATAGAGAGAGCGACGCATACTCAAGGGCTGGCGT
GACTGCTCGAATTCCGAGGGTAGTTTGCACAGAAAGATGTTTGATCGCCT
TTTGGCCCCTTGTTGCCCACTCCACGTGTTCAGTGGTCAGCTGTGTATGT
GACCACGATAAAGTTATAGTAGTCGTTAGGGAAGTAGCGTAG
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protein sequence of rna9197

>rna9197-protein ID=rna9197-protein|Name=rna9197|organism=Nannochloropsis gaditana|type=polypeptide|length=203bp
MIELDVCLDRSGEVIVHHDRYLPDGRLLENLALAQIKRVDPAVEPLARVL
ADLRASGVSLYLDIKTDRVVAPLMRLLHEAIAQKGWAPSRLLVASFNQYD
MIEVNAHRLAYPATLAALQTCIIVDGVPISFAKEYAALGVHWCSIGDGCV
LPSFLEDAHRRGIGVMVWTVNNARWGRSTRPGRGLEAGTAPEKGRLGVLG
SGN
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mRNA from alignment at KK037252.1:80837..81448-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna9197 ID=rna9197|Name=rna9197|organism=Nannochloropsis gaditana|type=mRNA|length=612bp|location=Sequence derived from alignment at KK037252.1:80837..81448- (Nannochloropsis gaditana)
ATGATCGAACTGGACGTGTGCTTAGACCGGAGCGGAGAGGTGATCGTCCA
CCACGACCGGTACCTTCCCGACGGCCGCCTCCTCGAGAACCTGGCCCTGG
CCCAGATCAAGCGTGTCGATCCCGCGGTGGAGCCCCTGGCGCGGGTGCTC
GCCGACCTGCGGGCCTCGGGCGTCTCGCTCTACCTGGACATCAAGACGGA
CAGGGTCGTCGCGCCGCTCATGCGCCTCTTGCACGAGGCCATCGCTCAGA
AAGGATGGGCGCCCTCGCGGCTTCTGGTCGCAAGCTTCAATCAGTATGAC
ATGATCGAGGTGAACGCTCACCGGCTCGCCTACCCGGCCACCCTCGCGGC
CTTGCAGACCTGCATCATCGTGGACGGGGTGCCCATCTCCTTCGCCAAGG
AGTACGCGGCCTTGGGTGTGCACTGGTGCTCCATCGGGGACGGATGCGTG
TTGCCGTCCTTTTTGGAGGACGCTCACCGGAGGGGCATCGGCGTGATGGT
CTGGACGGTCAACAATGCCAGGTGGGGGAGGTCGACGAGGCCGGGGAGGG
GCCTGGAGGCAGGGACGGCGCCGGAAAAGGGCAGACTAGGTGTTCTAGGT
TCGGGTAACTAA
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Coding sequence (CDS) from alignment at KK037252.1:80837..81448-

>rna9197 ID=rna9197|Name=rna9197|organism=Nannochloropsis gaditana|type=CDS|length=612bp|location=Sequence derived from alignment at KK037252.1:80837..81448- (Nannochloropsis gaditana)
ATGATCGAACTGGACGTGTGCTTAGACCGGAGCGGAGAGGTGATCGTCCA
CCACGACCGGTACCTTCCCGACGGCCGCCTCCTCGAGAACCTGGCCCTGG
CCCAGATCAAGCGTGTCGATCCCGCGGTGGAGCCCCTGGCGCGGGTGCTC
GCCGACCTGCGGGCCTCGGGCGTCTCGCTCTACCTGGACATCAAGACGGA
CAGGGTCGTCGCGCCGCTCATGCGCCTCTTGCACGAGGCCATCGCTCAGA
AAGGATGGGCGCCCTCGCGGCTTCTGGTCGCAAGCTTCAATCAGTATGAC
ATGATCGAGGTGAACGCTCACCGGCTCGCCTACCCGGCCACCCTCGCGGC
CTTGCAGACCTGCATCATCGTGGACGGGGTGCCCATCTCCTTCGCCAAGG
AGTACGCGGCCTTGGGTGTGCACTGGTGCTCCATCGGGGACGGATGCGTG
TTGCCGTCCTTTTTGGAGGACGCTCACCGGAGGGGCATCGGCGTGATGGT
CTGGACGGTCAACAATGCCAGGTGGGGGAGGTCGACGAGGCCGGGGAGGG
GCCTGGAGGCAGGGACGGCGCCGGAAAAGGGCAGACTAGGTGTTCTAGGT
TCGGGTAACTAA
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Synonyms
Publications