EWM21462.1, cds9167 (CDS) Nannochloropsis gaditana

Overview
NameEWM21462.1
Unique Namecds9167
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037252.1:80837..81448 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM21462.1
Productglycerophosphoryl diester phosphodiesterase
Orig transcript idgnl|cribi|Naga_100019g73.484.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037252.1supercontigKK037252.1:80837..81448 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0008081phosphoric diester hydrolase activity
Vocabulary: Biological Process
TermDefinition
GO:0006629lipid metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR017946PLC-like_Pdiesterase_TIM-brl
Homology
BLAST of EWM21462.1 vs. NCBI_GenBank
Match: gi|585101692|gb|EWM21462.1| (glycerophosphoryl diester phosphodiesterase [Nannochloropsis gaditana])

HSP 1 Score: 412.149 bits (1058), Expect = 1.169e-145
Identity = 203/203 (100.00%), Postives = 203/203 (100.00%), Query Frame = 0
Query:    1 MIELDVCLDRSGEVIVHHDRYLPDGRLLENLALAQIKRVDPAVEPLARVLADLRASGVSLYLDIKTDRVVAPLMRLLHEAIAQKGWAPSRLLVASFNQYDMIEVNAHRLAYPATLAALQTCIIVDGVPISFAKEYAALGVHWCSIGDGCVLPSFLEDAHRRGIGVMVWTVNNARWGRSTRPGRGLEAGTAPEKGRLGVLGSGN 203
            MIELDVCLDRSGEVIVHHDRYLPDGRLLENLALAQIKRVDPAVEPLARVLADLRASGVSLYLDIKTDRVVAPLMRLLHEAIAQKGWAPSRLLVASFNQYDMIEVNAHRLAYPATLAALQTCIIVDGVPISFAKEYAALGVHWCSIGDGCVLPSFLEDAHRRGIGVMVWTVNNARWGRSTRPGRGLEAGTAPEKGRLGVLGSGN
Sbjct:    1 MIELDVCLDRSGEVIVHHDRYLPDGRLLENLALAQIKRVDPAVEPLARVLADLRASGVSLYLDIKTDRVVAPLMRLLHEAIAQKGWAPSRLLVASFNQYDMIEVNAHRLAYPATLAALQTCIIVDGVPISFAKEYAALGVHWCSIGDGCVLPSFLEDAHRRGIGVMVWTVNNARWGRSTRPGRGLEAGTAPEKGRLGVLGSGN 203          
BLAST of EWM21462.1 vs. NCBI_GenBank
Match: gi|299470649|emb|CBN78590.1| (glcerophosphoryl diester phosphodiesterase [Ectocarpus siliculosus])

HSP 1 Score: 127.102 bits (318), Expect = 1.488e-30
Identity = 73/176 (41.48%), Postives = 105/176 (59.66%), Query Frame = 0
Query:    1 MIELDVCLDRSGEVIVHHDRYLPD-GRLLENLALAQIK-RVDPAVEPLARVLAD--LRASGVSLYLDIKTDRVVAPLMRLLHEAIAQKGWAPSRLLVASFNQYDMIEVNAHRLAYPATLAALQTCIIVDGVPISFAKEYAALGVHWCSIGDGCVLPSFLEDAHRRGIGVMVWTVNN 172
            +IE DV     G VI HHD  + + G  +ENL LAQ + R+  +V     +L +  L  SGV LY+D+K   +V P++  + +A+ + GW   RL+VA+F Q D+++VNA R A P  LA L+T  I+DG P++ A+++ AL V   S G   V P  + D  RRGI V VWTVN+
Sbjct:  147 VIEFDVLTTSDGVVICHHDPLIEESGEWIENLTLAQTRERLKHSVSTFEEMLQEKALSESGVHLYIDMKHTEIVRPVLHAVMQAVDRWGWTADRLVVATFRQLDLLQVNAFRQAIP-ELANLRTACIMDGGPLTLARDFKALKVDILSTGKDHVSPDLVADCQRRGIQVWVWTVNS 321          
BLAST of EWM21462.1 vs. NCBI_GenBank
Match: gi|669158072|ref|XP_008614598.1| (hypothetical protein SDRG_10388 [Saprolegnia diclina VS20] >gi|530733628|gb|EQC31870.1| hypothetical protein SDRG_10388 [Saprolegnia diclina VS20])

HSP 1 Score: 96.2857 bits (238), Expect = 1.169e-19
Identity = 67/180 (37.22%), Postives = 96/180 (53.33%), Query Frame = 0
Query:    1 MIELDVCLDRSGEVIVHHDRYLPDGRLLENLALAQIKRVDPAVEPLARVLADLRASGVSLYLDIKTDRVVAPLMRLLHEAIA---QKGWAPSRLLVASFNQYDMIEVNAHRLAYPATLAALQTCIIVDGVPISFAKEYAALGVHWCSIGDGCVLPSFLEDAHRRGIGVMVWTVN--NARW 175
            ++ +DV L   G V+VHHDR + DG L  +   A   R D  +  L +VLA +  SGV+LY  + +D V+APL+  L EA+    +  W+ +R  +AS N Y ++ +N HR A  A L  L T  I   +P+ + K + AL V    +  G V   F+ DAH RG+ V V  VN  N  W
Sbjct:  312 VLSVDVQLAGDGSVVVHHDRIV-DGSLFLDAMDADALR-DAGILSLQQVLATI--SGVALYFSVTSDAVIAPLLAQL-EAVCVDERSWWSSARFYIASGNHYQLLAINGHRSASHA-LHGLHTVAITHSIPLGYCKSFEALHVSHVYVDAGVVTRPFVFDAHSRGLHVFVGPVNHENTAW 485          
BLAST of EWM21462.1 vs. NCBI_GenBank
Match: gi|1173945395|gb|OQR94024.1| (hypothetical protein ACHHYP_01908 [Achlya hypogyna])

HSP 1 Score: 95.9005 bits (237), Expect = 1.700e-19
Identity = 62/179 (34.64%), Postives = 94/179 (52.51%), Query Frame = 0
Query:    1 MIELDVCLDRSGEVIVHHDRYLPDGRLLENLALAQIKRVDPAVEPLARVLADLRASGVSLYLDIKTDRVVAPLMRLLHEAIAQK--GWAPSRLLVASFNQYDMIEVNAHRLAYPATLAALQTCIIVDGVPISFAKEYAALGVHWCSIGDGCVLPSFLEDAHRRGIGVMVWTVNNARWGR 177
            ++ +DV L   G V+VH D  +  GR L  +  +++  V   V PL  VLA +R  G+++Y+ + TD V+APL+ LL    A +  GW+  +  VAS N Y ++ +N HR A PA L  L T      VP+ +   + AL V    +    V  +F+ DAH RG+ V V  V++    R
Sbjct:  327 IVAMDVQLAGDGTVVVHQDSVV-GGRFLHEMTASEL--VTAGVTPLTDVLAAVR--GIAVYVTVTTDAVLAPLLSLLATLCADETSGWSAPQFYVASGNHYQLLAINGHREATPA-LVGLHTVATTTSVPLGYCASFEALRVSHVCVDATVVTRAFVVDAHSRGLHVFVALVSHESVAR 499          
BLAST of EWM21462.1 vs. NCBI_GenBank
Match: gi|813207879|ref|XP_012210227.1| (hypothetical protein SPRG_15736 [Saprolegnia parasitica CBS 223.65] >gi|641524490|gb|KDO19071.1| hypothetical protein SPRG_15736 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 90.5077 bits (223), Expect = 1.433e-17
Identity = 65/179 (36.31%), Postives = 90/179 (50.28%), Query Frame = 0
Query:    1 MIELDVCLDRSGEVIVHHDRYLPDGRLLENLALAQIKRVDPAVEPLARVLADLRASGVSLYLDIKTDRVVAPLMRLLHEAIAQKG--WAPSRLLVASFNQYDMIEVNAHRLAYPATLAALQTCIIVDGVPISFAKEYAALGVHWCSIGDGCVLPSFLEDAHRRGIGVMVWTVN--NARW 175
            ++ +DV L   G V+V HD  L    +LE +    +   D  V  L  VL  +  SGV+LYL + +D V+ PLM LL    A +   W+  R  +AS N Y ++ +N HR A PA L  L T  I   +P+ + K + AL V    +  G V   F+ DAH RG+ V V  VN  N  W
Sbjct:  312 VLSIDVQLAGDGSVVVSHDNRL----ILEAMDAGGLS--DAGVLSLQHVLGTI--SGVALYLCVTSDAVILPLMALLEAVCADERSWWSGPRFYIASGNHYQLLAINGHRGAAPA-LHGLHTVAITHSIPLGYCKSFEALRVSHVYVDAGVVTRPFVHDAHSRGLHVFVGLVNHENVAW 481          
BLAST of EWM21462.1 vs. NCBI_GenBank
Match: gi|1173956552|gb|OQS03312.1| (hypothetical protein THRCLA_04393 [Thraustotheca clavata])

HSP 1 Score: 89.3521 bits (220), Expect = 3.575e-17
Identity = 57/176 (32.39%), Postives = 90/176 (51.14%), Query Frame = 0
Query:    4 LDVCLDRSGEVIVHHDRYLPDGRLLENLALAQIKRVDPAVEPLARVLADLRASGVSLYLDIKTDRVVAPLMRLLHEAIAQKG--WAPSRLLVASFNQYDMIEVNAHRLAYPATLAALQTCIIVDGVPISFAKEYAALGVHWCSIGDGCVLPSFLEDAHRRGIGVMVWTVN--NARW 175
            LDV L + G+V+VHHD   P GR + N++  ++  +   +  L  +L  ++   V LY+ I ++ V+ PLM LL +  +Q+   W+     +AS N Y +I VN +R + P  L  L T  I   +P+ + K +  L +    +    V   F+ DAH RG+ V V  VN  N  W
Sbjct:  331 LDVQLSKDGQVVVHHDSVDPCGRFICNMSTEELAEM--GIYSLQHILDIVQ---VPLYICITSEAVIVPLMSLLMQICSQEDCFWSAPLFYLASGNHYQLIAVNGYRNSIP-ILHGLHTVAITSSIPLGYCKSFEQLHITHVCVEAQVVTRGFVIDAHSRGMYVFVCNVNHENVAW 500          
BLAST of EWM21462.1 vs. NCBI_GenBank
Match: gi|931519270|gb|KPK96951.1| (hypothetical protein AMJ95_11645 [Omnitrophica WOR_2 bacterium SM23_72])

HSP 1 Score: 83.9593 bits (206), Expect = 2.056e-16
Identity = 53/180 (29.44%), Postives = 92/180 (51.11%), Query Frame = 0
Query:    1 MIELDVCLDRSGEVIVHHDRYLP----DGRLLENLALAQIKRVDPAVEPLARVLA-----DLRASGVSLYLDIKTDRVVAPLMRLLHEAIAQKGWAPSRLLVASFNQYDMIEVNAHRLAYPATLAALQTCIIVDGVPISFAKEYAALGVHWCSIGDGCVLPSFLEDAHRRGIGVMVWTVN 171
            MIE DVC+ ++GEV++ HD+ +     D   + N  L ++K  D  V    R+L      D     V + ++IK + V   + R++   + +KGW+    LV+SFN Y+++E N  RL     + A     ++ G+PI +A+    +  +        +  + +EDAH+RG+ V V+T N
Sbjct:   32 MIEFDVCICKTGEVVLFHDKMVDLVVDDTGYVANKTLQELKAYD--VGKGQRILTLEETLDFIDKRVRVNIEIKGEGVAGAVFRIIKRCVEEKGWSWDDFLVSSFNHYELLEFN--RLTSRIKIGA-----VIAGIPIGYAECATRVNAYSLHPSKEFINQALIEDAHKRGLKVFVYTPN 202          
BLAST of EWM21462.1 vs. NCBI_GenBank
Match: gi|1088108877|gb|OGZ72772.1| (hypothetical protein A2998_02650 [Candidatus Staskawiczbacteria bacterium RIFCSPLOWO2_01_FULL_37_25b])

HSP 1 Score: 76.2554 bits (186), Expect = 1.390e-13
Identity = 47/182 (25.82%), Postives = 87/182 (47.80%), Query Frame = 0
Query:    1 MIELDVCLDRSGEVIVHHDRYLP-----DGRLLENLALAQIKRVDPAVE---PLARVLADLRASGVSLYLDIKTDRVVAPLMRLLHEAIAQKGWAPSRLLVASFNQYDMIEVNAHRLAYPATLAALQTCIIVDGVPISFAKEYAALGVHWCSIGDGCVLPSFLEDAHRRGIGVMVWTVNNAR 174
            MIE DV + +SGE++V HD  L      +G ++E   L+++K +D   E   P    + DL    V + +++K D    P++ ++ + + +KGW     LV+SFN  ++         +      ++T I+ + +P +F         +  +I        F+++AH  G+ V VW+ N A 
Sbjct:   33 MIEFDVYVCKSGELVVIHDDTLERTTNGEGLVVEK-TLSELKELDAGKEEKIPTIEEVMDLADKKVKINIELKGDNTAKPVLNMIEKYVDEKGWKYDDFLVSSFNHNEL-------KKFKELNPKIKTGILFEEIPDNFMDFTEKADAYSINIPIKYATHEFVKNAHSHGLKVYVWSANEAE 206          
BLAST of EWM21462.1 vs. NCBI_GenBank
Match: gi|818305204|gb|KKP89338.1| (Glycerophosphoryl diester phosphodiesterase [Parcubacteria group bacterium GW2011_GWA2_36_10])

HSP 1 Score: 74.7146 bits (182), Expect = 5.115e-13
Identity = 48/181 (26.52%), Postives = 92/181 (50.83%), Query Frame = 0
Query:    2 IELDVCLDRSGEVIVHHDR----------YLPDGRLLENLALAQIKRVDPAVEPLARVLADLRASGVSLYLDIKTDRVVAPLMRLLHEAIAQKGWAPSRLLVASFNQYDMIEVNAHRLAYPATLAALQTCIIVDGVPISFAKEYAALGVHWCSIGDGCVLPSFLEDAHRRGIGVMVWTVNN 172
            +ELDV + ++GE++V HD           Y+ + + LE L L    + +    P  + + DL    V + +++K      P+ +++ + +  K W     +V+SFN +++ + N  +L     + AL     + G+PIS+A+    +G    ++    +   F++DAH+RG+ V VWTVN+
Sbjct:   23 VELDVYVCKTGELVVIHDDKVNRTTNGTGYVAE-KTLEELRLLDAGKGEKI--PTLQEVFDLIDKRVKVNIELKGVGTAEPVAQMIQDYVTNKSWTKDHFMVSSFNHHELKKFN--KLNPEIKIGAL-----ISGIPISYAEFAEKIGAFSINLDIDFINQEFVDDAHQRGLKVYVWTVND 193          
BLAST of EWM21462.1 vs. NCBI_GenBank
Match: gi|1084426067|gb|OGM93740.1| (hypothetical protein A2610_00590 [Candidatus Wolfebacteria bacterium RIFOXYD1_FULL_48_65] >gi|1084426817|gb|OGM94463.1| hypothetical protein A2524_01405 [Candidatus Wolfebacteria bacterium RIFOXYD12_FULL_48_21] >gi|1084430421|gb|OGM97931.1| hypothetical protein A2532_04315 [Candidatus Wolfebacteria bacterium RIFOXYD2_FULL_48_11])

HSP 1 Score: 74.7146 bits (182), Expect = 5.613e-13
Identity = 54/180 (30.00%), Postives = 88/180 (48.89%), Query Frame = 0
Query:    1 MIELDVCLDRSGEVIVHHDRY---LPDGR-LLENLALAQIKRVD----PAVEPLARVLADLRASGVSLYLDIKTDRVVAPLMRLLHEAIAQKGWAPSRLLVASFNQYDMIEVNAHRLAYPATLAALQTCIIVDGVPISFAKEYAALGVHWCSIGDGCVLPSFLEDAHRRGIGVMVWTVNN 172
            MIELDV L +SGEV+V HD     + +G   + +L L +++++D      +  LA    D       + +++K   VV P   L+   IA++GW     L  +F+ Y +         +   +  +    I+ GVPI +A+    LG +  ++    +   F+EDAHRRG+ V  WTVN 
Sbjct:   32 MIELDVRLCKSGEVMVLHDEKVDRMTNGHGAVSDLTLEELRQLDIKDGGKIPTLAEAF-DAIDRKARVVIELKHAEVVEPTAALVRSYIAERGWGADDFLPTAFDHYFLAR-------FRELVPGIGLAAILAGVPIGYAEFGERLGAYSVNMAFPFLNKEFVEDAHRRGLKVFAWTVNE 203          
The following BLAST results are available for this feature:
BLAST of EWM21462.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585101692|gb|EWM21462.1|1.169e-145100.00glycerophosphoryl diester phosphodiesterase [Nanno... [more]
gi|299470649|emb|CBN78590.1|1.488e-3041.48glcerophosphoryl diester phosphodiesterase [Ectoca... [more]
gi|669158072|ref|XP_008614598.1|1.169e-1937.22hypothetical protein SDRG_10388 [Saprolegnia dicli... [more]
gi|1173945395|gb|OQR94024.1|1.700e-1934.64hypothetical protein ACHHYP_01908 [Achlya hypogyna... [more]
gi|813207879|ref|XP_012210227.1|1.433e-1736.31hypothetical protein SPRG_15736 [Saprolegnia paras... [more]
gi|1173956552|gb|OQS03312.1|3.575e-1732.39hypothetical protein THRCLA_04393 [Thraustotheca c... [more]
gi|931519270|gb|KPK96951.1|2.056e-1629.44hypothetical protein AMJ95_11645 [Omnitrophica WOR... [more]
gi|1088108877|gb|OGZ72772.1|1.390e-1325.82hypothetical protein A2998_02650 [Candidatus Stask... [more]
gi|818305204|gb|KKP89338.1|5.115e-1326.52Glycerophosphoryl diester phosphodiesterase [Parcu... [more]
gi|1084426067|gb|OGM93740.1|5.613e-1330.00hypothetical protein A2610_00590 [Candidatus Wolfe... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9197rna9197Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications