rna9178, rna9178 (mRNA) Nannochloropsis gaditana

Overview
Namerna9178
Unique Namerna9178
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length7453
Alignment locationKK037252.1:23981..26476 -

Link to JBrowse

Properties
Property NameValue
Productsignal recognition particle 54 kda protein
Orig transcript idgnl|cribi|Naga_100204g2.5773.mrna
Orig protein idgnl|cribi|Naga_100204g2.5773
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037252.1supercontigKK037252.1:23981..26476 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100204g2gene8903Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna9178rna9178-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM21521.1cds9148Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna9178 ID=rna9178|Name=rna9178|organism=Nannochloropsis gaditana|type=mRNA|length=7453bp
CAGACGGGATCCATGAATTGGAATTTATTAATTCTTTCTCCCTTGATGTC
GTAGCAGCAGCTCATGTCCTGCTGGTCGGCATTTGCTGCCTTGGCCAAGG
CGAAGCGAGGCATGGAAAAAAGGCTCGTGCCTTGGTCCTTCCTCTTCCTC
GTGCTGCTTTCGTTGACTATCAGGACCAGTGTTGGCCCGCCCATTAATCC
TACGCAGGATGAACTTTTGTTACCCATTGTGAAAGAAACTGTGAAGGTCA
ACCTAGGCCCGAGCGACAGCAAAGATTATCGGGGGAGTGCTTTGTGCCAC
GCCGGCGATCTGGATGGGAATGGCGTAGACGATCTTGTGCTAGGAGCGTA
TGGAGACGACACTACTGCTAACAATGCGGGAGCTATTATGATACTGTACC
TGCGAAAAGATGTGGTGAATCCGCTGATTAGCTGGCGAAAGATTACTTCG
GGCACTGGAGGGTTCAACACCCGTCTGCAAGCCTTAGACTATTTCGGAGC
CGCGGTGGCCGGAGCTGGAGATATTAACGGCGACAGTGTCCCTGACCTGG
TGGTAGGAGCTCTGGGAGATGATGAAGCCGCGCTGAACGCAGGTGCCATC
TACTTGCTGTACATGCAACGTGTTCAGGCGTCGCCGGTGGCATCTTCTGT
GAAAATCACGGGTGGTAAAGGGGGTTTTGATGCCACTCTGGCTCAAAATT
CATACTTCGGCTCCTCCGTGGCTTATCTAGGCGACGTGGACGGAAATGGT
GTCGGAGACATTGCCGTGGGCGCGTATGGAGAGGACACATTGGCCGGCGT
TGTCTACATTCTCTTTCTGCAAAACTCTGCCGCCGTTCCCGTCGTAGGCT
GGTACAAATTACGCGCTCAAACACCGGGGTTTCCCTTTGCTCTGGCCCCC
AACGATGCCTTTGGAGCCTCCGTTGCAGGCATAGGAGATTTGAATGGAGA
CGGCGTCCCCGACATGGCCGTGGGGGCATATATGGACTCGGAGTACCAGC
CAGGGTGCGGCGCTGTGTACGTTATCTTGCTGCAGCGGCCACTCGGGGGT
CGAGAAGCGGTAGGGGGGTTGGCCGGTGGGGGCATGGTGCCGGCGGACGG
CAGTCCTGTCAAAGGGTCGAGCAAAATTACCCCGGGCAAGCACGGTTTCG
GGGATACGAGTCTGCAGGCGAATGCCTATTTCGGGGCCTCCATGGCTGGC
TTCCATGACTTGGATATGGACGGAGTGCCCGAACTGGTGGTAGGTACCAT
CGGTGACAGTCGTGCCAACCCAAACGCGGGTTCTGTTCACCTCCTATTTT
TGGGCCTGAATTCGACGGAGGACGGCTTGCCGATGGTCCGGGAGTGGCGG
AAGATCACCACGGGTCTCGAAGGGTTCGAGAGCCAGCTGCCAGCCAACAC
GAATTTCGGGGCAGCCCTGGCGGAGCTCCCGGATTTGAACGGAGACAATG
AGACAGAACTGGCGATCGGATGCTATGTGGCCTCCAACGCCAGTGTGTAC
ATCGTGTACAAAAACTCGTTGACTTCGGTGATGGAGAGCCCGCCACAAAT
CTACCTAGTGTCTCCCGCCCTCCTCGACACTCAGGGGGGGGAGGTTGTGT
CCATGGCCCTCTCTTTGGACGTGACGACCGTCGACCTCTCCCAACCCTAC
GAGCTGGAAGCCTTTGTGGGCCTGTCCCCCTGCCTGAACCCGGTTTTGCT
GCCTTACGGAGACGCCACCGCCCTGGCCCGGGCTCAGAAGGATGCCAGAG
CCCCGGGCGTGGTAGCGGCCGCTGTGAGTGCCCAAGGTGGTGTAGCTGCC
ATCCCTTTCGCTGTCCAGCCGGGCGCGGTCCAGGATCTGGCAACGAGTGA
AACGGATATGCCTGTTCATCCCTCCTTGGCCCTGATGCCCTTTCCTGCAG
TGTTGGCCTCCGAGACCCAACGGCCTTTTCTCCTCACTTGCGTGAGCACG
GCCGGGGTCGGAGCTCATGTGCTTGCACAGGCAACTATATCACAAGGAGG
GGCAGACATGCCCGTATCTATGGCAAACGCGGCCTCCTACACACCTCCTG
TGGTCAGCAGCATCGAGACGACAGGGACCATGGCCCGGGGAGGCTTTGAC
CTGCGGATCCTGGGTCGGCATTTCGGCGCCGACGATTTCGAGCCGTTGGT
CCTCATACAGGACACACCGTGCCAGGCAGTGGTATGGGTGTCTGACTCCG
AGGTAGTCTGCCGCGGCGTTCCCCCGGGACTGGGGGAGGCTCAAGTCCAA
GTCTCTGTGGGTGGACAAACAAGCAAACCGAGTCCGACGGCGGCCTTCGT
CTACGACTCCCCCCTCCTGAAATCTTGGAACGTGACCGAGCCGATGCGGG
TCTCGCTACCGGTCTTCGGCGGGTACAGTGTGGACCTGCCCTTCTCGCCC
TACACGGGCGGCAAGGAGGAGTTGAGTTTGTGGGGAAGCAATTTTGGCCC
GGCAGGCACGTTGACACAAGTGCAGCTGGGGCCGTGGGAATGTGCCGACG
CCCGGGTAATTGCCGACGACTTGATCACCTGCGTCACCCCGCCAGGCGTG
GGCAAGAACCTGACGATCGTTGTGAGCCTCGGCGGTTTCGAGGTGAGCTT
ATCCCCGGGCTTCACGTACGCGGCCCCTCTACTGGTCACCGTTGTTCCTG
ACACGGCGAACACAGGAGGCGGGGACCTGGTCGTCATGGGCCGCAACTTT
GGGCACACCTCGGAGGGTCTCCAGGTCTCGATAGGGGGGGAGGCCTGTCG
GGAGGTGAAAATGGTCTACGAACACCAACTGATCACGTGCAAGTACCCAC
CGGGGACTGGGAAGGGTCTTCCGATGCTGGTGACTGTGTCGGACCAATCC
AACTCCCCCCCCCGCGCCTTCAACTACGCGGATTCCTACGGACAACGGAC
GGTGGAAGCCGTTTTCTTCCTGGTGGGCGAGAGCCTGGAGAGCTTTGGGT
CGAACAAACAGGCCGTCTTCGAGCAAGTGCTGCTCCGGGCTATGGAATAT
GACCCTACCCTCAGCATCGCCGACGAAGCTGTGCACGTTTGCAATGTCAC
CAGCCTGGCTGGTCTCACCGCATCCACGGTCCAATCCTGGAACGTGAGCT
TTCAAGGGCGGGCCTATGCCCCAAATCCAAGCAAACAAGCCGTCTCCATC
GACGTCGACGCCGAAATGGGTACCCTCTGGGATCAAGGCAAAGAGGAAGA
CCGGCGGCGGGCAGACACGGACGTGGACAAGATCCTCATGGAGACGCCAT
TAGCCCCTAGTAATGCAGCTCGTCATCCGTCAGAGGACGTGTACCAAGAG
GATTCGATCCTGGTCTCTGTGGACGTCACGGCCGCCAACGCTAAGATTGG
TTCTGCGATTCAAACGTGGCTGATGACACCGGAGAAGCAGGCCCTGCTCC
GTGACTACTTGAACACGAAAGACACGGGCTTGCGGGTGATGGAGTTGCAA
GTGATTGCAGCCAGCATGACGAACGACTTGTACTGCCCCCCCGGTCAGCA
GCAGCAAGACATTGGGAGCAATGGGGAGAAAGCATGCTTCCTGTGCCCGC
TCGGCTCTTATCAACCGCTGCGTTCAAAGAGGCCCTGTCAACCCTGCCCG
CTTGGCACCGACTGTCTGCAGCAGGGTGTTTTCCTGCCGGTGCCCCTCCC
AGGGTATTGGCGACAGGCGTTGTCCGAATCTGAGGCCATCCGCACTGACC
CATATTTCAGCACCTATCGCATCTACGAATGTAACCCCAAGTCGGTGTGC
TTGGGAGGGATCTACTCCAATTGCACGGAGGGACACTTGCAAGGCGGACC
CCTGTGCGCAATTTGTGAGGACGGGTTCTATGGGGACGGGGGTGGGGCTT
GCAACCCTTGCGGCTCCAAGAGAATGATCCAAACGCTGGTCGCCTCTGTA
GTGTTGGGGGCTTTCTTGGCCTTTAGCATCGTACTCTACTTTTTTGTCCG
CCCCGGTACGGACATTGATGAGGCCGTGAAAAGCGTCCAAGATTCATTTC
TGGAGGGGCCAGGAGGTCGGTCCTTCTCCCGCGATTTGAACATGAGCTAC
TTCCTGAGCAACTCTCTTTCGCGCCACCTGGCTTCGCGGCTGTCCGACTT
GACCGACCTCCCGGACATTTGGAGCAAAGCCAAGATCTCCATAACCTTTT
TTCAAATTTTGGCCTCCCTTAACGTCGCCTACACGGTGCCTTGGCCGCAA
GAATTTCGACAATTTTTGCACATGCTCAGTTTTTTAAATCTTAATATATT
GAATCTACCGGGTATGGCGTATTCGTGCGTCCAGCCTGTGGACTATTTCG
CGGAATTTATGGTTGCGGTGACCCTACCTTTCCTTCTCACCCTCGTGCTT
CTCGTCCTCTACGCCGTGGGCCTCCGGCGCATCCACAAGAAGGTCTCCAG
CAACATCGATGTGGTCAAAGCCTTGGAGGCGCAATCGGCACGAATGAAAC
ACCAACTCATCCGGAAGATGCGCGCGATCTCGGTCCGAATGTTGAGACGG
CGGCCTCTTCGTCGCCCTGTGGCCACCAACTCCTTGCTCTCGACGGCCCT
GGCCGCCTCCGCCGCCGCCATCCCCTTCCCTGCGAAAAAAAACGGAGCCC
CCACAATCAGTCTCGACCGCACGGAAGGTACGACAGTCAAAATGCCACCG
GGGACGCGTGTCGTCGCTACAGCCTCGGACCCTCCAAGGGACATGAAGAG
GGACGCCGCGGTGCTCACGTGGAGGTCGTCTTCCATCCCCACCATCGAGG
AAGAATCCGCGGAAGTCGTTTCCCCGCCGAGCGCCGCCTCCTCCCCGCCG
ACTGCAGAAGGCCATGACCCTGGCATGGCTTTCCTTCCTCCCTCTTCAAC
ATCCCTGGTCTCTCACACCTCGGCCCCCGTCCTGGATGACTGGGCTTCGG
TCATGCCCCACCACGCGGCAGTCCCCTCCCGCCCACCTTCACCCGCAGCC
ACCAGCTATGCCCCCTCCCATCCACACACGGACGTGCTCCAACCACGTCC
TTCGTCCCCGCCCGGGCGCCTCCCCCTCCCTCAGCCGGCCGCCTCTCGGT
TTTCTCCTCCCCCTCCGTCCCGCACGACCCCCCCTCTTATTGCAGAGCCC
TCTCAGTCCTCGCCCCCCCCGGCGCCTTCTTCCTCGTTCGCGCCACACCG
CCCGCACCACGCTGCACAGCTCCCTCCCTTCGATATAAGCGTCCCGTCTT
ACCCTCTATCGCATGCCCTTCCTCCTCAAGCCTCCCCCGCGGTCTGCTCT
GCCGTCATCGACATCTTTTCACCTCGTCCGTCGTCAGACGAAGGCGAGAA
AGACAGAATCCTGCCCGACATCCCGTTCCCTTCCGCCCCCGCCTTTCCCT
CAGACTCGTCACTGACCTCCCTATCCTCTCGGCCGTTGCCGACGCTGCCG
CCGCCGCAGCAACAGCAACAACAGTTCCAACAACAGCTGCAGAAGGCACA
CAAAAGAGCCACGTTTAGCGAGCGGGTGACGTCCTCCTCGGGCGAGATCG
TGACAATAAGCTCTGAGAAGAGCCACAGCGTGGTCGGGCCGAGAGAGAAT
GCGGCCGGGGCTGCGGGTGGACTGGAAAGGAAGGGAGAAACGGCAGTAGA
CGGGGCCAAGGGTGCAGGTACCCAAGCGAGTCACGCGCGAACCGAGGGGC
CGACGCTGCAAAGCTTCGAGTCCACCGGCGACGACGACGAGGACGAATCG
ATTTTGGAAATCAAGCACAAATTGACCCTGTTGGAAAAACAGGAGAACGT
GGAGCGATTTTCCGTGGAACGCTACACGTCTCGGATGATCACCTTCTGGT
TCTGGATCATTCTCCTCATCTACCCGGCCGTCTCGCGCGTGGTCCTCGGT
GCGGTTAACTGCCGGACCCTCGACAACGGGCGCCGGTACCTGGTGTCGGA
CTTTACCATCGATTGCCGATCCCGCTATTACTTGCGGTACATGCCCCTGA
TTGTCCTCGCCCTGGCCGTTTACCCCGTGGGGATCCCGGTCATGTTCTTC
CTCCTCTTGAAGTACCGAAGGAACGTCCACCCCTGGGACGAGAACCTCTC
CTTCCTGTACAAGACCTACCGACGCCGTTACTGGTGGTTCGAGATCTACG
AGCTACTGCGCAAGCTTTTTTTGACGGGATTGATCATTTTCATCGCAGCC
GGGACCGCGACCCAGCTGGCCATCGCGTGTCTGGTCTGTGCCGTGACAAT
GTGCCTGCACCTGCGGCTCCAGCCCTACGAGGAGCAGAGCGACGACAGCT
TGCAAGGATTTGCCCTGGCCGAGATCCTCCTAGTCACCTACTGTGCCCTC
TTGCTGAAGCTGGACGTGACGGGCGACGATGAAAACCACCTGCATGTCTT
CGACGTCCTCCTCCTCTCCACCAACGCCGTCGTGGTCTTCGGGATCATGC
CCGCAGCCTTCTACGTCCAGGGCCGCCAGTATTATGACCGTTTCCGCGCC
CACCTCTCCCTCTCTTTGCCTTCCCGGATGGTGCGAGCTGCTGCCCACCG
TCTTCTTGTCTCCCTCTGCCTCCTCCTGACCCTCTTCCCGGCCATCTCGA
ATTTCTCCTCCCCCCTGCTCACCTTCAAGCTCACGTTCTTCGTCGCCGCC
ATGCTTTTTTACAACACCTTGCTCTTTCTCTACTTCCTCCCGTGGTCGCA
CGTCAGGTTTTTCCCTCCACGTTACCGCATCATCGCCGTCCTGGCCCCTC
AGAACTGCCACCTGGAGGAGGCGGCCAAAAGGGGCGGGTGGAGCGGCCTC
AGCGAAAGTATGCAAGGCAAGGGCAATTTTTCCAAATTGAATGCGCGAAA
ATTGGAAGCCATCGAGGCGGCGGGTTTGTCCATGGCCCAGCTCTCCCAAA
GCCGGTTCCGGCGGAGGACGGAGAGCGGGGGGGAGGGAGGGAGGGAGGGA
GGGAGGGAAGGGGAGGTGGTGGTGCGCCGGCTTTCTTCCTTGGACAGCAG
CGTCACCCAGTCCGGGAAGGACGTGGGCGGGGGAGGCATGATGGGAAGAG
GAAAAGCCTTGGACAAAAGGGAGCTGTACGGAGCAGGGCAGGACGAGGTC
GGGCCGGATCCCTCTCCCCTTAACCGCCTCCTCTTGACTCCTTACATGCT
CCTGGTGCGGCACCGCCGGGCGCTCGACCCGATCTGCGCGGTGCTGGTGG
TGGACTTGGCTGTCACGTGCGCGAGGGAGGGCGAGGGTCGAGGAAACTAC
GCATGCATCGTCATGCTGGCCCTTGCCGGATTCTTCACGCTCGGCCTCTG
CGGATGGGCCCATATCACGGACAAGCACCCGCCCCTCCTCTCCGCGCTTC
GGATCGGCCAACTTGCTTTCGCGCTCGCCACCATGGACGTCCTCTTCGCA
GCCTTTACCCCCCTCAACAATCGCCCGCGGGCATTGGCCACCGACGGCTG
GGGGTTGGCGACAGAGGTGGGGGTTGTGCTGGTCACGGCCCTCGTGCGCC
TTG
back to top

protein sequence of rna9178

>rna9178-protein ID=rna9178-protein|Name=rna9178|organism=Nannochloropsis gaditana|type=polypeptide|length=543bp
MVLQELGDKLTGALRRLQTTTVVNDDVLNDLLQDVCRALVESDVNIKVVA
TLRKGIKEKVNLADAPAGLNRRKMVQRAVMEELVRLVDSGTKPYQMKKGK
SNVIMFVGLQGSGKTTTIAKYANYYQRKGWKTCMVCADTFRAGAFDQLKQ
NATKLRVPFYGSYTEADPVRIAEEGVQQFRSEGYEVIIVDTSGRHKQEEA
LFEEMKEIQAAVRPDNVVYVMDATQGQAVFDQAQGFHQAAAVGSVIVTKL
DGHAKGGGALSAVAATGAPIIFLGSGEHFDDLDVFNPGSFISRLLGLGDM
RGFLEEVSSLGAREGGKERQEAMAQRLVKGQFTLRDMYEQFENVMKLGPL
SKVMGMLPGFPSFLMGGGEGGRGGQDEAATGRLKRFLTMMDSMTDAELDG
KVDLNKSESRVNRIARGSGAHPMEVQFLLKTYAQFSQMFKKMGPMMLKGG
EGGIQRQMARNPGGVMNQLSKAVDPRMLQQMGGAKGMMDMMKAMGGGMGG
GLADMLQNLGGGGEGEGEEEGVDEEGEGWIQNRCRRRWRKWKI
back to top

mRNA from alignment at KK037252.1:23981..26476-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna9178 ID=rna9178|Name=rna9178|organism=Nannochloropsis gaditana|type=mRNA|length=2496bp|location=Sequence derived from alignment at KK037252.1:23981..26476- (Nannochloropsis gaditana)
GTACACAGGTAAAGAGCTCCTCTAGAGTGTTGTGGAGAGAGAAGCAGAAA TATCGTGCAAAGAGAAGGCCGCATTTCCATAGGGCCCCACAGCGAAATAG GGTGTGATCATGGTGTTGCAGGAGCTCGGTGACAAGCTTACGGGGGCTCT ACGCCGGCTGCAGACCACCACGGTATGTTGTCACGAGTTTTCCATTTCTC CTGGAGCCAAATGTTTCCGGCGATTTCACGCTCATTTGCTTGTTTGAATG CATCTGCTGCGCTCTTTCACAGGTCGTCAACGACGACGTCCTCAACGACC TGCTCCAGGACGTATGCCGTGCGTTAGTCGAATCCGATGTGAATATCAAG GTAGTGGCGACCCTTAGAAAGGGCATCAAGGAGAAAGTCAACCTTGCAGA TGCCCCCGCTGGCCTGAACAGACGGAAAATGGTGCAGCGGGCGGTGATGG AGGAATTGGTCCGCCTGGTCGACTCGGGAACAAAGCCGTACCAAATGAAG AAGGGAAAGTCGAACGTGATCATGTTTGTGGGCTTGCAAGGCTCGGGGAA AACTACCACCATTGCCAAATACGCCAACTATTACCAGCGGAAGGTAATTC TTTCAGTTTTTGGATTCCCTGCTCGGGGGACCTCGCACTCTTTCTCGATC TCAGGACCGTACGCACCTCATGTGCCATGTTTTTCTCCTCGATTTGCTTT ACACGTCCTCTCAATAGGGATGGAAGACGTGCATGGTGTGTGCCGATACC TTTCGTGCCGGAGCCTTCGATCAGCTGAAGCAGGTAGGGAGGGCGTGAGA GAGGCGGAAGAGGGAGAAAGGGAATGAGCCATAGGAAGTGAAAGAGCCAG CTTGTTTCAACTTTGGGAAGCGAAGGCTATAATGTGCGACCCCGCAATAC GATGATACTCATTATCTCTTCCTCACCCCCGACGTCCCCGGGCCTTGGCT CTCAGAATGCGACAAAACTCCGTGTGCCTTTTTACGGCTCCTACACGGAG GCGGACCCGGTACGGATCGCCGAGGAGGGCGTCCAGCAGTTCCGTTCAGA GGGATACGAGGTTATCATTGTCGATACCTCGGGCCGGCACAAGCAGGTGG GGCGGGAGGAAGGGCGGGAGGGAGGGCGGGAGGGAAGGAGGGTGCAGTAA CTGTGTGTTGCGGTTGTCCTTTTGGTCGTCGTCCCTTCCTTTCTCTGACG ATGCCTTCCACCTTTTTCATCAACACATACCCACACTTACATATGGACCC TTTCAGGAAGAAGCCCTGTTTGAGGAGATGAAAGAGATCCAAGCGGCGGT CCGTCCCGACAACGTGGTGTACGTCATGGACGCCACCCAGGGCCAAGCCG TCTTCGACCAGGCACAGGGTTTCCACCAGGCCGCCGCGGTGGGCTCCGTC ATTGTCACCAAGCTGGACGGGCACGCCAAGGGGGGAGGCGCCTTGTCGGC CGTGGCGGCGACGGGGGCGCCTATCATATTTTTGGGCTCGGGGGAGCATT TTGACGACCTGGACGTCTTCAACCCCGGGAGTTTCATCAGTCGGTTGCTG GGCTTGGGGGACATGCGGGGTTTTTTGGAGGAAGTGAGCAGCCTGGGGGC GAGGGAAGGAGGGAAAGAGAGGCAGGAGGCCATGGCCCAGCGGCTCGTCA AGGGCCAGTTCACCCTCCGCGACATGTACGAGCAGTTTGAGAACGTGATG AAGCTGGGGCCCCTTTCCAAGGTCATGGGCATGCTGCCGGGCTTTCCCTC TTTTCTGATGGGGGGGGGGGAAGGAGGGAGGGGGGGGCAGGACGAAGCTG CCACGGGCCGGCTGAAGCGTTTCTTGACCATGATGGACAGCATGACGGAC GCGGAGCTCGATGGGAAGGTGGACCTGAACAAGAGCGAGAGCCGCGTGAA CCGGATTGCTCGAGGAAGCGGGGCACACCCGATGGAAGTCCAATTTTTGC TCAAGACGTACGCGCAATTCTCGCAAATGTTCAAGAAGATGGGCCCGATG ATGTTGAAAGGCGGGGAGGGTGGCATACAGCGGCAGATGGCACGCAACCC GGGAGGCGTGATGAATCAGTTGAGCAAGGCGGTGGACCCGCGAATGCTAC AGCAGATGGGAGGCGCAAAAGGAATGATGGACATGATGAAAGCGATGGGA GGAGGAATGGGGGGGGGGCTTGCGGACATGCTGCAGAACTTGGGGGGAGG GGGGGAGGGAGAGGGGGAGGAAGAGGGAGTGGACGAGGAGGGGGAGGGAT GGATCCAGAACAGATGCAGGCGCAGATGGCGCAAATGGAAGATATGATGA AAAGTATGGGAATGGGTGGAGGAGGGAAAGGAGGTGGAGGGTTCCCTTTC TGACGAACCGAACACGGTGGGGATACTCCAATAACAAAATAACAACAATG CGATTTGCTTCGGTAGCGCGGCAATTTGTGACATGCCCGCTTAAAATATA AATGGAGTCTTTGTTGATGTGAAGCGGATAATTTAGAAGGCACTAA
back to top

Coding sequence (CDS) from alignment at KK037252.1:23981..26476-

>rna9178 ID=rna9178|Name=rna9178|organism=Nannochloropsis gaditana|type=CDS|length=8160bp|location=Sequence derived from alignment at KK037252.1:23981..26476- (Nannochloropsis gaditana)
GAAGAAGCCCTGTTTGAGGAGATGAAAGAGATCCAAGCGGCGGTCCGTCC
CGACAACGTGGTGTACGTCATGGACGCCACCCAGGGCCAAGCCGTCTTCG
ACCAGGCACAGGGTTTCCACCAGGCCGCCGCGGTGGGCTCCGTCATTGTC
ACCAAGCTGGACGGGCACGCCAAGGGGGGAGGCGCCTTGTCGGCCGTGGC
GGCGACGGGGGCGCCTATCATATTTTTGGGCTCGGGGGAGCATTTTGACG
ACCTGGACGTCTTCAACCCCGGGAGTTTCATCAGTCGGTTGCTGGGCTTG
GGGGACATGCGGGGTTTTTTGGAGGAAGTGAGCAGCCTGGGGGCGAGGGA
AGGAGGGAAAGAGAGGCAGGAGGCCATGGCCCAGCGGCTCGTCAAGGGCC
AGTTCACCCTCCGCGACATGTACGAGCAGTTTGAGAACGTGATGAAGCTG
GGGCCCCTTTCCAAGGTCATGGGCATGCTGCCGGGCTTTCCCTCTTTTCT
GATGGGGGGGGGGGAAGGAGGGAGGGGGGGGCAGGACGAAGCTGCCACGG
GCCGGCTGAAGCGTTTCTTGACCATGATGGACAGCATGACGGACGCGGAG
CTCGATGGGAAGGTGGACCTGAACAAGAGCGAGAGCCGCGTGAACCGGAT
TGCTCGAGGAAGCGGGGCACACCCGATGGAAGTCCAATTTTTGCTCAAGA
CGTACGCGCAATTCTCGCAAATGTTCAAGAAGATGGGCCCGATGATGTTG
AAAGGCGGGGAGGGTGGCATACAGCGGCAGATGGCACGCAACCCGGGAGG
CGTGATGAATCAGTTGAGCAAGGCGGTGGACCCGCGAATGCTACAGCAGA
TGGGAGGCGCAAAAGGAATGATGGACATGATGAAAGCGATGGGAGGAGGA
ATGGGGGGGGGGCTTGCGGACATGCTGCAGAACTTGGGGGGAGGGGGGGA
GGGAGAGGGGGAGGAAGAGGGAGTGGACGAGGAGGGGGAGGGATGGATCC
AGAACAGATGCAGGCGCAGATGGCGCAAATGGAAGATATGAAATGCGACA
AAACTCCGTGTGCCTTTTTACGGCTCCTACACGGAGGCGGACCCGGTACG
GATCGCCGAGGAGGGCGTCCAGCAGTTCCGTTCAGAGGGATACGAGGTTA
TCATTGTCGATACCTCGGGCCGGCACAAGCAGGGATGGAAGACGTGCATG
GTGTGTGCCGATACCTTTCGTGCCGGAGCCTTCGATCAGCTGAAGCAGGT
CGTCAACGACGACGTCCTCAACGACCTGCTCCAGGACGTATGCCGTGCGT
TAGTCGAATCCGATGTGAATATCAAGGTAGTGGCGACCCTTAGAAAGGGC
ATCAAGGAGAAAGTCAACCTTGCAGATGCCCCCGCTGGCCTGAACAGACG
GAAAATGGTGCAGCGGGCGGTGATGGAGGAATTGGTCCGCCTGGTCGACT
CGGGAACAAAGCCGTACCAAATGAAGAAGGGAAAGTCGAACGTGATCATG
TTTGTGGGCTTGCAAGGCTCGGGGAAAACTACCACCATTGCCAAATACGC
CAACTATTACCAGCGGAAGATGGTGTTGCAGGAGCTCGGTGACAAGCTTA
CGGGGGCTCTACGCCGGCTGCAGACCACCACGGAAGAAGCCCTGTTTGAG
GAGATGAAAGAGATCCAAGCGGCGGTCCGTCCCGACAACGTGGTGTACGT
CATGGACGCCACCCAGGGCCAAGCCGTCTTCGACCAGGCACAGGGTTTCC
ACCAGGCCGCCGCGGTGGGCTCCGTCATTGTCACCAAGCTGGACGGGCAC
GCCAAGGGGGGAGGCGCCTTGTCGGCCGTGGCGGCGACGGGGGCGCCTAT
CATATTTTTGGGCTCGGGGGAGCATTTTGACGACCTGGACGTCTTCAACC
CCGGGAGTTTCATCAGTCGGTTGCTGGGCTTGGGGGACATGCGGGGTTTT
TTGGAGGAAGTGAGCAGCCTGGGGGCGAGGGAAGGAGGGAAAGAGAGGCA
GGAGGCCATGGCCCAGCGGCTCGTCAAGGGCCAGTTCACCCTCCGCGACA
TGTACGAGCAGTTTGAGAACGTGATGAAGCTGGGGCCCCTTTCCAAGGTC
ATGGGCATGCTGCCGGGCTTTCCCTCTTTTCTGATGGGGGGGGGGGAAGG
AGGGAGGGGGGGGCAGGACGAAGCTGCCACGGGCCGGCTGAAGCGTTTCT
TGACCATGATGGACAGCATGACGGACGCGGAGCTCGATGGGAAGGTGGAC
CTGAACAAGAGCGAGAGCCGCGTGAACCGGATTGCTCGAGGAAGCGGGGC
ACACCCGATGGAAGTCCAATTTTTGCTCAAGACGTACGCGCAATTCTCGC
AAATGTTCAAGAAGATGGGCCCGATGATGTTGAAAGGCGGGGAGGGTGGC
ATACAGCGGCAGATGGCACGCAACCCGGGAGGCGTGATGAATCAGTTGAG
CAAGGCGGTGGACCCGCGAATGCTACAGCAGATGGGAGGCGCAAAAGGAA
TGATGGACATGATGAAAGCGATGGGAGGAGGAATGGGGGGGGGGCTTGCG
GACATGCTGCAGAACTTGGGGGGAGGGGGGGAGGGAGAGGGGGAGGAAGA
GGGAGTGGACGAGGAGGGGGAGGGATGGATCCAGAACAGATGCAGGCGCA
GATGGCGCAAATGGAAGATATGAAATGCGACAAAACTCCGTGTGCCTTTT
TACGGCTCCTACACGGAGGCGGACCCGGTACGGATCGCCGAGGAGGGCGT
CCAGCAGTTCCGTTCAGAGGGATACGAGGTTATCATTGTCGATACCTCGG
GCCGGCACAAGCAGGGATGGAAGACGTGCATGGTGTGTGCCGATACCTTT
CGTGCCGGAGCCTTCGATCAGCTGAAGCAGGTCGTCAACGACGACGTCCT
CAACGACCTGCTCCAGGACGTATGCCGTGCGTTAGTCGAATCCGATGTGA
ATATCAAGGTAGTGGCGACCCTTAGAAAGGGCATCAAGGAGAAAGTCAAC
CTTGCAGATGCCCCCGCTGGCCTGAACAGACGGAAAATGGTGCAGCGGGC
GGTGATGGAGGAATTGGTCCGCCTGGTCGACTCGGGAACAAAGCCGTACC
AAATGAAGAAGGGAAAGTCGAACGTGATCATGTTTGTGGGCTTGCAAGGC
TCGGGGAAAACTACCACCATTGCCAAATACGCCAACTATTACCAGCGGAA
GATGGTGTTGCAGGAGCTCGGTGACAAGCTTACGGGGGCTCTACGCCGGC
TGCAGACCACCACGGAAGAAGCCCTGTTTGAGGAGATGAAAGAGATCCAA
GCGGCGGTCCGTCCCGACAACGTGGTGTACGTCATGGACGCCACCCAGGG
CCAAGCCGTCTTCGACCAGGCACAGGGTTTCCACCAGGCCGCCGCGGTGG
GCTCCGTCATTGTCACCAAGCTGGACGGGCACGCCAAGGGGGGAGGCGCC
TTGTCGGCCGTGGCGGCGACGGGGGCGCCTATCATATTTTTGGGCTCGGG
GGAGCATTTTGACGACCTGGACGTCTTCAACCCCGGGAGTTTCATCAGTC
GGTTGCTGGGCTTGGGGGACATGCGGGGTTTTTTGGAGGAAGTGAGCAGC
CTGGGGGCGAGGGAAGGAGGGAAAGAGAGGCAGGAGGCCATGGCCCAGCG
GCTCGTCAAGGGCCAGTTCACCCTCCGCGACATGTACGAGCAGTTTGAGA
ACGTGATGAAGCTGGGGCCCCTTTCCAAGGTCATGGGCATGCTGCCGGGC
TTTCCCTCTTTTCTGATGGGGGGGGGGGAAGGAGGGAGGGGGGGGCAGGA
CGAAGCTGCCACGGGCCGGCTGAAGCGTTTCTTGACCATGATGGACAGCA
TGACGGACGCGGAGCTCGATGGGAAGGTGGACCTGAACAAGAGCGAGAGC
CGCGTGAACCGGATTGCTCGAGGAAGCGGGGCACACCCGATGGAAGTCCA
ATTTTTGCTCAAGACGTACGCGCAATTCTCGCAAATGTTCAAGAAGATGG
GCCCGATGATGTTGAAAGGCGGGGAGGGTGGCATACAGCGGCAGATGGCA
CGCAACCCGGGAGGCGTGATGAATCAGTTGAGCAAGGCGGTGGACCCGCG
AATGCTACAGCAGATGGGAGGCGCAAAAGGAATGATGGACATGATGAAAG
CGATGGGAGGAGGAATGGGGGGGGGGCTTGCGGACATGCTGCAGAACTTG
GGGGGAGGGGGGGAGGGAGAGGGGGAGGAAGAGGGAGTGGACGAGGAGGG
GGAGGGATGGATCCAGAACAGATGCAGGCGCAGATGGCGCAAATGGAAGA
TATGAAATGCGACAAAACTCCGTGTGCCTTTTTACGGCTCCTACACGGAG
GCGGACCCGGTACGGATCGCCGAGGAGGGCGTCCAGCAGTTCCGTTCAGA
GGGATACGAGGTTATCATTGTCGATACCTCGGGCCGGCACAAGCAGGGAT
GGAAGACGTGCATGGTGTGTGCCGATACCTTTCGTGCCGGAGCCTTCGAT
CAGCTGAAGCAGGTCGTCAACGACGACGTCCTCAACGACCTGCTCCAGGA
CGTATGCCGTGCGTTAGTCGAATCCGATGTGAATATCAAGGTAGTGGCGA
CCCTTAGAAAGGGCATCAAGGAGAAAGTCAACCTTGCAGATGCCCCCGCT
GGCCTGAACAGACGGAAAATGGTGCAGCGGGCGGTGATGGAGGAATTGGT
CCGCCTGGTCGACTCGGGAACAAAGCCGTACCAAATGAAGAAGGGAAAGT
CGAACGTGATCATGTTTGTGGGCTTGCAAGGCTCGGGGAAAACTACCACC
ATTGCCAAATACGCCAACTATTACCAGCGGAAGATGGTGTTGCAGGAGCT
CGGTGACAAGCTTACGGGGGCTCTACGCCGGCTGCAGACCACCACGGAAG
AAGCCCTGTTTGAGGAGATGAAAGAGATCCAAGCGGCGGTCCGTCCCGAC
AACGTGGTGTACGTCATGGACGCCACCCAGGGCCAAGCCGTCTTCGACCA
GGCACAGGGTTTCCACCAGGCCGCCGCGGTGGGCTCCGTCATTGTCACCA
AGCTGGACGGGCACGCCAAGGGGGGAGGCGCCTTGTCGGCCGTGGCGGCG
ACGGGGGCGCCTATCATATTTTTGGGCTCGGGGGAGCATTTTGACGACCT
GGACGTCTTCAACCCCGGGAGTTTCATCAGTCGGTTGCTGGGCTTGGGGG
ACATGCGGGGTTTTTTGGAGGAAGTGAGCAGCCTGGGGGCGAGGGAAGGA
GGGAAAGAGAGGCAGGAGGCCATGGCCCAGCGGCTCGTCAAGGGCCAGTT
CACCCTCCGCGACATGTACGAGCAGTTTGAGAACGTGATGAAGCTGGGGC
CCCTTTCCAAGGTCATGGGCATGCTGCCGGGCTTTCCCTCTTTTCTGATG
GGGGGGGGGGAAGGAGGGAGGGGGGGGCAGGACGAAGCTGCCACGGGCCG
GCTGAAGCGTTTCTTGACCATGATGGACAGCATGACGGACGCGGAGCTCG
ATGGGAAGGTGGACCTGAACAAGAGCGAGAGCCGCGTGAACCGGATTGCT
CGAGGAAGCGGGGCACACCCGATGGAAGTCCAATTTTTGCTCAAGACGTA
CGCGCAATTCTCGCAAATGTTCAAGAAGATGGGCCCGATGATGTTGAAAG
GCGGGGAGGGTGGCATACAGCGGCAGATGGCACGCAACCCGGGAGGCGTG
ATGAATCAGTTGAGCAAGGCGGTGGACCCGCGAATGCTACAGCAGATGGG
AGGCGCAAAAGGAATGATGGACATGATGAAAGCGATGGGAGGAGGAATGG
GGGGGGGGCTTGCGGACATGCTGCAGAACTTGGGGGGAGGGGGGGAGGGA
GAGGGGGAGGAAGAGGGAGTGGACGAGGAGGGGGAGGGATGGATCCAGAA
CAGATGCAGGCGCAGATGGCGCAAATGGAAGATATGAAATGCGACAAAAC
TCCGTGTGCCTTTTTACGGCTCCTACACGGAGGCGGACCCGGTACGGATC
GCCGAGGAGGGCGTCCAGCAGTTCCGTTCAGAGGGATACGAGGTTATCAT
TGTCGATACCTCGGGCCGGCACAAGCAGGGATGGAAGACGTGCATGGTGT
GTGCCGATACCTTTCGTGCCGGAGCCTTCGATCAGCTGAAGCAGGTCGTC
AACGACGACGTCCTCAACGACCTGCTCCAGGACGTATGCCGTGCGTTAGT
CGAATCCGATGTGAATATCAAGGTAGTGGCGACCCTTAGAAAGGGCATCA
AGGAGAAAGTCAACCTTGCAGATGCCCCCGCTGGCCTGAACAGACGGAAA
ATGGTGCAGCGGGCGGTGATGGAGGAATTGGTCCGCCTGGTCGACTCGGG
AACAAAGCCGTACCAAATGAAGAAGGGAAAGTCGAACGTGATCATGTTTG
TGGGCTTGCAAGGCTCGGGGAAAACTACCACCATTGCCAAATACGCCAAC
TATTACCAGCGGAAGATGGTGTTGCAGGAGCTCGGTGACAAGCTTACGGG
GGCTCTACGCCGGCTGCAGACCACCACGGAAGAAGCCCTGTTTGAGGAGA
TGAAAGAGATCCAAGCGGCGGTCCGTCCCGACAACGTGGTGTACGTCATG
GACGCCACCCAGGGCCAAGCCGTCTTCGACCAGGCACAGGGTTTCCACCA
GGCCGCCGCGGTGGGCTCCGTCATTGTCACCAAGCTGGACGGGCACGCCA
AGGGGGGAGGCGCCTTGTCGGCCGTGGCGGCGACGGGGGCGCCTATCATA
TTTTTGGGCTCGGGGGAGCATTTTGACGACCTGGACGTCTTCAACCCCGG
GAGTTTCATCAGTCGGTTGCTGGGCTTGGGGGACATGCGGGGTTTTTTGG
AGGAAGTGAGCAGCCTGGGGGCGAGGGAAGGAGGGAAAGAGAGGCAGGAG
GCCATGGCCCAGCGGCTCGTCAAGGGCCAGTTCACCCTCCGCGACATGTA
CGAGCAGTTTGAGAACGTGATGAAGCTGGGGCCCCTTTCCAAGGTCATGG
GCATGCTGCCGGGCTTTCCCTCTTTTCTGATGGGGGGGGGGGAAGGAGGG
AGGGGGGGGCAGGACGAAGCTGCCACGGGCCGGCTGAAGCGTTTCTTGAC
CATGATGGACAGCATGACGGACGCGGAGCTCGATGGGAAGGTGGACCTGA
ACAAGAGCGAGAGCCGCGTGAACCGGATTGCTCGAGGAAGCGGGGCACAC
CCGATGGAAGTCCAATTTTTGCTCAAGACGTACGCGCAATTCTCGCAAAT
GTTCAAGAAGATGGGCCCGATGATGTTGAAAGGCGGGGAGGGTGGCATAC
AGCGGCAGATGGCACGCAACCCGGGAGGCGTGATGAATCAGTTGAGCAAG
GCGGTGGACCCGCGAATGCTACAGCAGATGGGAGGCGCAAAAGGAATGAT
GGACATGATGAAAGCGATGGGAGGAGGAATGGGGGGGGGGCTTGCGGACA
TGCTGCAGAACTTGGGGGGAGGGGGGGAGGGAGAGGGGGAGGAAGAGGGA
GTGGACGAGGAGGGGGAGGGATGGATCCAGAACAGATGCAGGCGCAGATG
GCGCAAATGGAAGATATGAAATGCGACAAAACTCCGTGTGCCTTTTTACG
GCTCCTACACGGAGGCGGACCCGGTACGGATCGCCGAGGAGGGCGTCCAG
CAGTTCCGTTCAGAGGGATACGAGGTTATCATTGTCGATACCTCGGGCCG
GCACAAGCAGGGATGGAAGACGTGCATGGTGTGTGCCGATACCTTTCGTG
CCGGAGCCTTCGATCAGCTGAAGCAGGTCGTCAACGACGACGTCCTCAAC
GACCTGCTCCAGGACGTATGCCGTGCGTTAGTCGAATCCGATGTGAATAT
CAAGGTAGTGGCGACCCTTAGAAAGGGCATCAAGGAGAAAGTCAACCTTG
CAGATGCCCCCGCTGGCCTGAACAGACGGAAAATGGTGCAGCGGGCGGTG
ATGGAGGAATTGGTCCGCCTGGTCGACTCGGGAACAAAGCCGTACCAAAT
GAAGAAGGGAAAGTCGAACGTGATCATGTTTGTGGGCTTGCAAGGCTCGG
GGAAAACTACCACCATTGCCAAATACGCCAACTATTACCAGCGGAAGATG
GTGTTGCAGGAGCTCGGTGACAAGCTTACGGGGGCTCTACGCCGGCTGCA
GACCACCACG
back to top
Synonyms
Publications