rna9151, rna9151 (mRNA) Nannochloropsis gaditana

Overview
Namerna9151
Unique Namerna9151
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length246
Alignment locationKK037251.1:450098..450710 +

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100564g4.6260.mrna
Orig protein idgnl|cribi|Naga_100564g4.6260
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037251.1supercontigKK037251.1:450098..450710 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100564g4gene8876Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna9151rna9151-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM21550.1cds9121Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna9151 ID=rna9151|Name=rna9151|organism=Nannochloropsis gaditana|type=mRNA|length=246bp
ATGGTGTATATAGGGAACAGTGTTTCCCTGACTCCTCCAATTTTCAGTAA
AGTATTCAAGAATAAACAAACAAAACAATCCCTAAGGGAAAACAACAGAT
CCCTAAACTACCTCACCTCGTCTTTCCTTCACATCCACACCAACCCCCAT
CACACCCCACAAACGTCCCGGCCCTCGTCCCTCAACAACGATACCTCGGG
TAGTCAAACACACGAGTTCGTCGTGTTTTGGAAAACACGGGGATGA
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protein sequence of rna9151

>rna9151-protein ID=rna9151-protein|Name=rna9151|organism=Nannochloropsis gaditana|type=polypeptide|length=68bp
MCGIRKPFGAFAGRDRLINTSAHVLQISELPGFPFVGSLLLRHSSSFASS
TPSWLISFTYPLQLTCHR
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mRNA from alignment at KK037251.1:450098..450710+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna9151 ID=rna9151|Name=rna9151|organism=Nannochloropsis gaditana|type=mRNA|length=613bp|location=Sequence derived from alignment at KK037251.1:450098..450710+ (Nannochloropsis gaditana)
ATGTGCGTATGGAAATCGGATCAAAGTAAAATACGGGGTTTTGTTCTTTA
ATGTCTTGGCGCGCGATCACCGGGTACGACATAGAATCGAGAGAGGGCTC
TTCGATGGGGTACCCGGGAACACACCCATGAACTAACGTACTTAACAAAT
GTTTTAAGCTTCGTTAGCCTTATTTTTAAAATACATACATACATTGCTTT
CTTTTTAGGGTATACGCAAACCATTTGGCGCTTTTGCTGGGAGAGATAGG
CTAATTAATACAAGTGCACACGTCCTTCAGATTTCCGAGGTACGTGGGCC
CATACTACGTTCACATCCCTACCGACTCTTTCCCCCGCATTGATGAGTCT
TGCCGAGTCTTGTTTTACTTAAATGCTTATCAACTCCAGTCACTCGGCCT
AACAAAAAACAGTTGCCAGGTTTTCCTTTCGTAGGTAGCCTCTTGCTGAG
GCATTCCTCTTCATTTGCGTCGTCCACGCCTTCCTGGTTGATTTCCTTCA
CTTACCCCCTACAGTTGACATGCCATGTGAGTTCAACCCAAGTTGAGTAG
TAAAACCATAAAAGAGATAAGTGAATCTGTTACTCATGCAATTTAATAAT
CCCGCAGCGCTGA
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Coding sequence (CDS) from alignment at KK037251.1:450098..450710+

>rna9151 ID=rna9151|Name=rna9151|organism=Nannochloropsis gaditana|type=CDS|length=828bp|location=Sequence derived from alignment at KK037251.1:450098..450710+ (Nannochloropsis gaditana)
ATGTGCGGTATACGCAAACCATTTGGCGCTTTTGCTGGGAGAGATAGGCT
AATTAATACAAGTGCACACGTCCTTCAGATTTCCGAGTTGCCAGGTTTTC
CTTTCGTAGGTAGCCTCTTGCTGAGGCATTCCTCTTCATTTGCGTCGTCC
ACGCCTTCCTGGTTGATTTCCTTCACTTACCCCCTACAGTTGACATGCCA
TCGCTGAATGTGCGGTATACGCAAACCATTTGGCGCTTTTGCTGGGAGAG
ATAGGCTAATTAATACAAGTGCACACGTCCTTCAGATTTCCGAGTTGCCA
GGTTTTCCTTTCGTAGGTAGCCTCTTGCTGAGGCATTCCTCTTCATTTGC
GTCGTCCACGCCTTCCTGGTTGATTTCCTTCACTTACCCCCTACAGTTGA
CATGCCATCGCTGAATGTGCGGTATACGCAAACCATTTGGCGCTTTTGCT
GGGAGAGATAGGCTAATTAATACAAGTGCACACGTCCTTCAGATTTCCGA
GTTGCCAGGTTTTCCTTTCGTAGGTAGCCTCTTGCTGAGGCATTCCTCTT
CATTTGCGTCGTCCACGCCTTCCTGGTTGATTTCCTTCACTTACCCCCTA
CAGTTGACATGCCATCGCTGAATGTGCGGTATACGCAAACCATTTGGCGC
TTTTGCTGGGAGAGATAGGCTAATTAATACAAGTGCACACGTCCTTCAGA
TTTCCGAGTTGCCAGGTTTTCCTTTCGTAGGTAGCCTCTTGCTGAGGCAT
TCCTCTTCATTTGCGTCGTCCACGCCTTCCTGGTTGATTTCCTTCACTTA
CCCCCTACAGTTGACATGCCATCGCTGA
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Synonyms
Publications