EWM21550.1, cds9121 (CDS) Nannochloropsis gaditana

Overview
NameEWM21550.1
Unique Namecds9121
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037251.1:450098..450103 +
Alignment locationKK037251.1:450306..450386 +
Alignment locationKK037251.1:450510..450623 +
Alignment locationKK037251.1:450705..450710 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM21550.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100564g4.6260.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037251.1supercontigKK037251.1:450098..450103 +
KK037251.1supercontigKK037251.1:450306..450386 +
KK037251.1supercontigKK037251.1:450510..450623 +
KK037251.1supercontigKK037251.1:450705..450710 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM21550.1 vs. NCBI_GenBank
Match: gi|585101799|gb|EWM21550.1| (hypothetical protein Naga_100564g4 [Nannochloropsis gaditana])

HSP 1 Score: 139.813 bits (351), Expect = 3.810e-42
Identity = 68/68 (100.00%), Postives = 68/68 (100.00%), Query Frame = 0 
Query:    1 MCGIRKPFGAFAGRDRLINTSAHVLQISELPGFPFVGSLLLRHSSSFASSTPSWLISFTYPLQLTCHR 68
            MCGIRKPFGAFAGRDRLINTSAHVLQISELPGFPFVGSLLLRHSSSFASSTPSWLISFTYPLQLTCHR
Sbjct:    1 MCGIRKPFGAFAGRDRLINTSAHVLQISELPGFPFVGSLLLRHSSSFASSTPSWLISFTYPLQLTCHR 68
The following BLAST results are available for this feature:
BLAST of EWM21550.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585101799|gb|EWM21550.1|3.810e-42100.00hypothetical protein Naga_100564g4 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9151rna9151Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications