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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_101135g2.5597.mrna |
| Orig protein id | gnl|cribi|Naga_101135g2.5597 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037251.1 | supercontig | KK037251.1:443561..444697 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna9148 ID=rna9148|Name=rna9148|organism=Nannochloropsis gaditana|type=mRNA|length=1249bp
TCGTGAACGGATCATTTTCGATTTACCTCCTGCCTCGCCCCATTGACGTT
TCCTACTAGTAGTACTACAACGTCGCTGAGAAAGGCGAGTCTCCAAGGCC
AATGTGACACACGCAAAAAGCACTCTTAAGATGCGACTTCCGTGTCGATT
ACGCACACAACGCAGGGAATGAAAGCGGCAAAGGCACCTTTCAATTTCGG
AGGACAGAAGGGCAGCAAAGGCAGCGACATAGCGGCCCTCGAGTCTGCGC
TACAGCAACTTCTCCTCCGCGCTACCGATGCCCGCCCTACCGCCACTGCT
CCCCTTCCTTCCGCCAGTTTTTTGCCACGGTCGATGCTCCGGACCTTGCT
TTCCAGCGGCCTTGATGCTGCGGCTCCGGAAAGCGTACGGCTGTTATCGT
ATCGCGTGCTAGCCGAGGGGAGAGGCATTGCGCGGCAGGGGGGAGCGGCA
CCGGAGGCAATCGAGAGCCTGAAGGCAGTCGTCCTGAGAGAGCTTCAGAC
CGACATGCAAGAGGAAGGACAAGACCGGGGCGTGGATGAAGGCGAAGGCG
GAGGCGAAGACGTCTTTGCACAGGTCGACGCCGACACGGACAATGTACGC
ATATGGGCCCTCCGAGCATTGCTGAACAACGCAACGGACGCGCATTTGCT
CTTGTTTTTAAGAGACACGGCCTTCCTAACGGGCCTGAAGGCGGCCGTTT
CTCCACCCAGCCCCACCGACCCGCTCAGACCCGCCGTCCTCTTCTATCTG
GGAGTACAAGCCTTGCCTCGCCTCGCCGCTGCCCTCCCTTCCCTCCCCCT
CACCGCCGTTCTCCCCCCCTTTACCTCCGTGGAGGAGGAGCGGCGCGTCC
GAGAGGAAGCCCAGGACGGGATCCTCGACATGCTCAAGCTCTTTCTCCAG
GCCGCCGAGCTCCCGCACGACGTGGCCAGTGCTCAGGCCTTCCAAGCCCT
CGACGCGTTCGTGGAGACCGGCGTGCCCCGACGCCTGAGGAGACGGGTCC
ACGCCCTCCTTGGGGAAGAGGGGGAAGAAGAGCTGCCCTCGGCGACCGCC
ACGTCCATGACGCTGGCCTTTATGCGCCACACCCTCCCTCGCTTCCCCCG
CCTCCTCCTCCGCGCTGCCGCCCTCCCCCCCACCTCCCCCTCCTCCGCCC
CCGCCCTCTCCTTCCTCTCCCGCCTCCTCGCCCACGCCCTCCTCGAGACC
ACCAACGCCCAGGGTCTTCACCTCCACCTTCCTCATCAGAAGTACGTCC back to topprotein sequence of rna9148 >rna9148-protein ID=rna9148-protein|Name=rna9148|organism=Nannochloropsis gaditana|type=polypeptide|length=144bp
MHRRRAARAAALVLCLLAVICDLPGAWGKEGKNRPMFYDGGAWHDLDEDP
RPGEPLPYPPDSDSWQRPDTTVHVQISSFRDHRCPKTLYNLFTKAKFPGR
VRVGVVQQNEKDDVGAQGGRACVAAWNLAHASPPPQTVSIRTAA back to topmRNA from alignment at KK037251.1:443561..444697+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna9148 ID=rna9148|Name=rna9148|organism=Nannochloropsis gaditana|type=mRNA|length=1137bp|location=Sequence derived from alignment at KK037251.1:443561..444697+ (Nannochloropsis gaditana)
CGTTTCAAACACTTCTCATCATTACTGTGTCCCAGTCTAGGCGGTTGAAG
ATGcacagaaggagggcggcaagggccGCGGCGCTTGTCCTTTGTCTCCT
GGCAGTCATATGCGACCTCCCGGGAGCctggggcaaggaggggaagaacc
GTCCCATGGTGCGTCTTCAATGGCGTGGATGCCGAGCATCACAGGCCCTG
CGATGCTTGGCCGTGGCCGGCTGGATACAGACTTCTCACGAAAGTCATGT
CCCTCCGATCTATCTCATTTCTGTACACGGCTTCAGTTCTATGATGGCGG
GGCTTGGCACGATTTGGATGAGGATCCACGCCCGGGGGAGCCCCTACCGT
AAGTCTGCACAGATTTggcggcctcgcccccccccaaggcaCTCACGTTT
CGCGTGGCCCTTCACAGGTACCCCCCAGACTCGGACTCGTGGCAGCGACC
TGACACCACGGTCCATGTGCagatctcctccttccgggaTCATCGGTGTC
CAAAGTAAGTGAGAAGGCTTGTCAGCGGTGACGCGGGACTGActagagga
ggaaaagagtgTTGGCGAGtcattcctccttttcagTGCGTGGGCTCTTC
GAGCGCCCCGCAggatagagggggaggaaggcgcgaCCGTGCGagccatg
ccccccccaccctccctccctccatccctccctccctccctccctccctc
aggacCCTGTACAATCTGTTCACCAAGGCCAAGTTTCCGGGCCGGGTCCG
CGTGGGTGTGGTCCAGCAGaacgagaaggacgacgtCGGtgcgcagggag
ggcgggcctgTGTCGCAGCCTGGAATCTCGCTcacgcctctccccccccc
cagacTGTCTCTATACGTACTGCAGCATGatcaaggaggagcgaggccTT
CACCCCCTGGCCCAAGCCCCCACGAGCAGCCGCGGGGTAGGTCCCTCCTC
TAGCACGCCGTGCCGTGCCTGCACCtgtccatccctccctccctccctcc
ctccctccctccctccctccctccctccctccctggcatCAGGCGCAGAC
CATTTTGCAGAATTGCCCTCACGCGGATCAGGTGAAGATGATGCGGGTTC
CGGCCAGCGGGGCCAAGGGGCCTACGTACGggcggtg back to topCoding sequence (CDS) from alignment at KK037251.1:443561..444697+ >rna9148 ID=rna9148|Name=rna9148|organism=Nannochloropsis gaditana|type=CDS|length=1740bp|location=Sequence derived from alignment at KK037251.1:443561..444697+ (Nannochloropsis gaditana)
ATGcacagaaggagggcggcaagggccGCGGCGCTTGTCCTTTGTCTCCT
GGCAGTCATATGCGACCTCCCGGGAGCctggggcaaggaggggaagaacc
GTCCCATGTTCTATGATGGCGGGGCTTGGCACGATTTGGATGAGGATCCA
CGCCCGGGGGAGCCCCTACCGTACCCCCCAGACTCGGACTCGTGGCAGCG
ACCTGACACCACGGTCCATGTGCagatctcctccttccgggaTCATCGGT
GTCCAAAgacCCTGTACAATCTGTTCACCAAGGCCAAGTTTCCGGGCCGG
GTCCGCGTGGGTGTGGTCCAGCAGaacgagaaggacgacgtCGGtgcgca
gggagggcgggcctgTGTCGCAGCCTGGAATCTCGCTcacgcctctcccc
ccccccagacTGTCTCTATACGTACTGCAGCATGaATGcacagaaggagg
gcggcaagggccGCGGCGCTTGTCCTTTGTCTCCTGGCAGTCATATGCGA
CCTCCCGGGAGCctggggcaaggaggggaagaaccGTCCCATGTTCTATG
ATGGCGGGGCTTGGCACGATTTGGATGAGGATCCACGCCCGGGGGAGCCC
CTACCGTACCCCCCAGACTCGGACTCGTGGCAGCGACCTGACACCACGGT
CCATGTGCagatctcctccttccgggaTCATCGGTGTCCAAAgacCCTGT
ACAATCTGTTCACCAAGGCCAAGTTTCCGGGCCGGGTCCGCGTGGGTGTG
GTCCAGCAGaacgagaaggacgacgtCGGtgcgcagggagggcgggcctg
TGTCGCAGCCTGGAATCTCGCTcacgcctctccccccccccagacTGTCT
CTATACGTACTGCAGCATGaATGcacagaaggagggcggcaagggccGCG
GCGCTTGTCCTTTGTCTCCTGGCAGTCATATGCGACCTCCCGGGAGCctg
gggcaaggaggggaagaaccGTCCCATGTTCTATGATGGCGGGGCTTGGC
ACGATTTGGATGAGGATCCACGCCCGGGGGAGCCCCTACCGTACCCCCCA
GACTCGGACTCGTGGCAGCGACCTGACACCACGGTCCATGTGCagatctc
ctccttccgggaTCATCGGTGTCCAAAgacCCTGTACAATCTGTTCACCA
AGGCCAAGTTTCCGGGCCGGGTCCGCGTGGGTGTGGTCCAGCAGaacgag
aaggacgacgtCGGtgcgcagggagggcgggcctgTGTCGCAGCCTGGAA
TCTCGCTcacgcctctccccccccccagacTGTCTCTATACGTACTGCAG
CATGaATGcacagaaggagggcggcaagggccGCGGCGCTTGTCCTTTGT
CTCCTGGCAGTCATATGCGACCTCCCGGGAGCctggggcaaggaggggaa
gaaccGTCCCATGTTCTATGATGGCGGGGCTTGGCACGATTTGGATGAGG
ATCCACGCCCGGGGGAGCCCCTACCGTACCCCCCAGACTCGGACTCGTGG
CAGCGACCTGACACCACGGTCCATGTGCagatctcctccttccgggaTCA
TCGGTGTCCAAAgacCCTGTACAATCTGTTCACCAAGGCCAAGTTTCCGG
GCCGGGTCCGCGTGGGTGTGGTCCAGCAGaacgagaaggacgacgtCGGt
gcgcagggagggcgggcctgTGTCGCAGCCTGGAATCTCGCTcacgcctc
tccccccccccagacTGTCTCTATACGTACTGCAGCATGa back to top
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