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Properties
| Property Name | Value |
|---|
| Product | nuclear export mediator factor nemf |
| Orig transcript id | gnl|cribi|Naga_100012g94.1980.mrna |
| Orig protein id | gnl|cribi|Naga_100012g94.1980 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037251.1 | supercontig | KK037251.1:426248..428761 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna9141 ID=rna9141|Name=rna9141|organism=Nannochloropsis gaditana|type=mRNA|length=2442bp
ATGTCGTCCTATCCAAACGACATAAGCGTCTCGAGGCTGGACGCGGGTCA
GGCCTTCGACGGTTTAAGCGCAAATGAGAAGCTCTACGCATTGCATATTG
CCACTGCCAGTTGGGAAGGGGCCAAGATCTGCTTGTTCCAATGCTCTTAC
GAGGCGCCCGTCATTTTCACCCTGTTGCAACTGACCTTTAGCGGCGAGAA
AGACGGCGGCTTTGAAAGCCTGAAGGCGGCGGCAGGCGTAGGCGAAGAGG
AGTGGAGGGCCTTCCTCACCTTTGCGGCCGCTTTCCTGGCCAATATGGGG
AACATGAAAAGCTTCGGGGACAGCAAAATCATCCCCGCGATTTCAGCGGA
AGCATTCCACCAAATTTTGACCGCTGCGACCGCCTATTCCTCTCACAAAG
CCTTGATCGAAGAGCTGTGGGAGACCGTGCGGGAAGTGCTGTACTCCACC
GCCCCCGTCAAGGAGCTCGGCTTCCCACCCTCCGGGAGCAGCTCCTACTA
CTCGGCAAACGTGAGTAAGGACGATGCCGCCGCCGTGCAAACGTTTCTGG
ATGAGCGGGGTATATCAGCCTACAACACACGCCTCTTCAAAGAGGTTGAG
GGGGGCTACCTTGTCAGGCAGGCCGCGGCCGAGGCGAGCCCCTCGCCCGT
GGCGGAGGGGACCGTGGGGGGTGACGGGGGAGGCCAGGCCCCCATCAAGG
TGGTGGCCGGAGACTTTGCGCCCCTCATGGGTCGCGTGGCGGCGGCGCTG
GAGCGCGCCAAGGCCCATGCCGCGAGCCCTCTCCAGGAGCGCATGCTTAC
GCACTACTGCCAGAGCTTCCGCACGGGCTCGATCGAGGCGCACAAGGACG
GGAGCCGGGTCTGGGTGCAGGACAAAGGGCCGGCCGTGGAATCCTACATC
GGTTTCATCGAGTCCTACCGCGACCCATTCGGGGTGCGGGCGGAGTGGGA
GGGTTTCGTGGCGGTCGTTAACCGGTCCATGAGCGAGAAGTTCGCCGACC
TGGTCCAGGCGGCCGAGAGCCTGCTGCCCCTGCTCCCCTGGCCCCCCAGC
TTCGAGAAGGACGCCTTCCTCCGCCCGGACTTCACCTCCTTGGACGTGCT
CGCCTTCGGGAGCAGCGGCATCCCGGCCGGCATCAACATCCCCAACTACG
ACGACATCCGCCAGGACGAGGGCTTCAAGAACGTCTCCCTGGGCAACGTC
CTGGCCGCCTCCCTCTCCACCAAGACGGTCAACTTCTTGCGCAGCGACAA
TGGAGATGAGGCCCTCTTCAAGGCCCTGGTCAAGGAGGCCTTCGAGGTCC
AGGTCGGGATCCACGAGCTCCTCGGCCACGGCTCCGGGAAGCTCTTCTGC
CAGCACAAGGACGGCAGCTTCAACTTCGAGCGAGAAAGCACCCTCGACCC
CCTCACGGACAGGCCCGTGGCCTCCTTCTACAAGCCCGGCGAGAGCTGGG
ATTCGCGCTTCCCGGGCTTCGGCTCCTCCTACGAGGAGTGTCGCGCCGAG
CTGGTCGGCATCTTCCTGTGCGTGCAGCCCCGGGTCCTCTCCATCTTCGG
GCACGAGGGAGACAAGGCACAGGACATCCTCTACGTGAACTGGCTGAACA
TGGTCCGGGCGGGGCTGCTGGCGCTGGAGTTCTACCGCCCCGAGACGGGC
AGCTGGGGTCAGGCACACATGCAGGCCCGCTTCTGCATCCTCCGCGTCCT
TTTGGAGGCAGGAAAGGGCTTGGTGACGCTGGCGCCCGACGAGGAGAAGG
GCCTGACCGTCTCCCTGGACCGAACCAAGATCCTGGAGGTGGGCGTACCG
GCCGTCGCGGACTTCTTGCGCCGGATCCAAGTCTACAAGTCCACCGCCGA
CGTGGAGCAGGCCAGGGCCATGTACGTGGACTCTTACTCGCAGGTCCCGG
CCCACCTCCTCGCTATGCGTCAGGTGGTACTAGCCAAGAAGAAGGAGCGG
CCGCTCTTCGTCCAGCCGCATTTGGAGCTGGCGCCCGGTGAGGGTGCCGG
AGAGCCCGAGGTGCGCCTGCGAGAGTTCCCGGCCACGGTGGAAGGCGTCA
TCCAGTCCTTTCAGGCCCGCTTCCCCGCCTTGGACGAGGACATGCTCAGG
CTCTGGCGGGCGGACCGGGATGTTGTAGCGCCTCTCTACCTGCGAGAGGG
TATCGACGGCAGCGGTGCTGGCTCCAAGAGGTGCAAGGTGCAGAACGGGG
ACGGAGGGGCGGCTGTGGCGACGGCCTGATGGGAGGACTTGCACGCGAGC
CGCGGTTCCGGCGGGAACAAGGAAAGGAGGAAAAGGAGGAAAAGGGCATC
CGCCCCCTCAGTGCAGAGATCCCTGTCAAGAACGCGTAGCTTGACTGCCA
GTGTGTTGACGTCTCGTAGAGGAGTATAAAAGAATCACCATGAATATGAA
ATTTTCAGCACCGCAGCAAAGGCAACATAGACCATCCCGTCC back to topprotein sequence of rna9141 >rna9141-protein ID=rna9141-protein|Name=rna9141|organism=Nannochloropsis gaditana|type=polypeptide|length=463bp
MEKAVKAAERQAAASLSKQQRKRTLSVVRKPYWFEKFHWFITSDNHLVVS
GRDAQQNELLVKRYLRVGDAYVHADLPGAASCVVRHKGALGGVGAEVSPV
ALQEAGCLAVSRSSAWKAKMVTSAWWVGAGQVSKTAPAGEFLPTGSFMVR
GKKNFLAPQPLEMGLGLLFKLDEGSVGRHTKERRERGEVGGEEEGGEGEV
ERRRQEWLEKELVRRREDLGAMELRALAALPTDSQQWAVMRAFEAAVGAG
APGRRVRSKSALLAQEIQRQVVLGSQAPALASKGRREGCGEEVGKEDQEG
TEEDATPAVSRRAAAREEEEGLLALLEEEGVAGGGGEEEAEVEEEQRELR
RLTGRPVSEDLLLFAMPVCAPYSALAPAYYKYRVKLTPGAQKKGKAAHQA
LEVFVRDREATPREVELIKGIADNELVAACMGDVQVSKPGIQAALLKAKR
SKATAKVKASRGR back to topmRNA from alignment at KK037251.1:426248..428761- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna9141 ID=rna9141|Name=rna9141|organism=Nannochloropsis gaditana|type=mRNA|length=2514bp|location=Sequence derived from alignment at KK037251.1:426248..428761- (Nannochloropsis gaditana)
ATGGAGAAGGCCGTGAAGGCGGCGGAGCGCCAGGCGGCCGCCTCTCTGAG
CAAGCAGCAGAGGAAGCGGACCCTCTCGGTCGTCCGCAAGCCCTACTGGT
TCGAGAAGTTCCACTGGTTCATCACCTCCGACAACCACCTGGTGGTCAGG
TACGCGGCGTTACGGTGGGGGGTTGGCGGTAGGGGTGACTGTCTCCTGTG
TCCGCCCACGGCCCGAGCCTGCGAGACGCGGTCCCCATCCCTTTCCTCAC
GCCCCCTTCCTCCCACGCGGGCCGCTCTCCTTCCAACCCTTCCCCCCTAG
CGGGCGGGATGCGCAACAGAACGAGCTCCTGGTCAAGCGCTACCTGCGCG
TGGGCGACGCTTACGTGCATGCCGACCTCCCCGGGGCCGCCTCCTGCGTG
GTCCGGCACAAGGGCGCCTTGGGCGGGGTGGGGGCAGAGGTCTCCCCCGT
AGCGCTGCAGGAGGCGGGCTGTCTGGCCGTCAGCCGGTCCTCGGCATGGA
AGGCGAAGATGGTCACGTCGGCCTGGTGGGTGGGGGCGGGGCAGGTGAGC
AAGACGGCGCCCGCGGGGGAGTTTCTCCCCACCGGGTCCTTCATGGTCCG
GGGGAAGAAGAACTTCCTGGCGCCGCAGCCGCTGGAGATGGGCCTGGGCC
TGCTCTTCAAGCTGGACGAAGGGAGCGTGGGGCGGCACACGAAGGAGCGG
CGAGAGCGAGGGGAGGTTGGGGGGGAGGAGGAGGGAGGGGAGGGGGAGGT
GGAGCGTCGGCGGCAGGTGCAGCGCCTTGAGAAGAGCATAGCGGCGCTCT
CGGTACAACCGTTCGTGCGGATAGAGGAGGAAAATGATGAGGGGGAGAAG
AAGGAGGAGGGAGAGGAGGGAAAGGAGGAGGAAAAGGAGGAGAAGGATGA
CGAGGATGATGATGATGAGGAGGAGGAGGAGGAGGAAGATGATGTGGAGG
GTTGGGCAGTTGCGGGTCCGGGCAGCGAAGGAGAGGCGCGTAAGGTGTGG
CATACGGGGGAGGGGAAGGGGGCTCTCATCGAGGGGGGAGATGAGGAGGC
GGGTGAGGGGGGGGAAGGCGGGGCAGGGCCGGCTGCGTGCGGGGAGGGCG
GGGGGGAGAGGGGCAAGGGAGGACAGAAAGGAAATGGCGGTCGGTTTTCA
GCCAAAGAGCGGCGGTTGCTGAGGAAGGGCGTGGCTCTGGGGGACATTAG
AGCCCGCGAAATTGTGGACCGGCGCTCGGGGGCTCTGGGCGACCAGGAGC
AAGTTGAGGGGGCGGCGGGGGGGGGTGGGAGGGAGTGGGGGAAGGGGGAA
GGGAGGGAGGGAGGGAGGAAGGGAGGGAGGGAGAGGGAAGGCTGGAGCTC
TCGGAGAGCGGGCCAGAAAAGCGTGGGAAGAAGGGGAAGATGAAGAAAAT
GAGGAAGAAATACGCGGAGCAGGACGCGGAGGACCGGGAGCTGGCGCTGC
AAGCGCTGGGCGTGATAGCGCCGCCCAACGGGCCGAAGAAGAAGGGGCAA
CGGCGTGGCAATGGGAAGAAGGAAGGGCCGGGGGCCGGGTCAGCGGAGGC
GGCGGGCGCCAGGCTGGCGGGGGAGGTGACGAAGATGGAGGAAGTCGGGT
GGGAAGAGGCCTGGGGAGGGCTGCCGCCCTGGGTGCGGGAGCGGATTCAG
GAGTGGCTGGAGAAGGAGCTGGTGCGGCGCCGGGAGGATTTGGGCGCGAT
GGAGCTAAGGGCTCTGGCTGCTCTTCCGACAGATTCCCAGCAATGGGCAG
TCATGCGGGCCTTCGAGGCGGCCGTGGGGGCCGGGGCCCCGGGGCGGAGG
GTCCGGAGCAAAAGCGCGTTACTGGCGCAGGAGATTCAACGGCAGGTGGT
CCTCGGGAGTCAGGCCCCCGCTCTTGCCTCTAAGGGGAGGAGGGAGGGCT
GTGGCGAAGAGGTTGGGAAGGAGGATCAAGAAGGGACTGAAGAGGATGCG
ACGCCAGCCGTGAGCCGACGGGCGGCGGCCCGGGAGGAGGAGGAAGGGCT
TCTGGCGCTGCTGGAGGAGGAAGGGGTGGCGGGCGGGGGGGGCGAGGAGG
AGGCAGAGGTGGAGGAGGAGCAGCGGGAGCTGCGGCGACTGACGGGCAGG
CCGGTCTCGGAGGACCTCTTGCTCTTCGCCATGCCCGTGTGCGCGCCCTA
CTCGGCCCTGGCCCCCGCCTACTACAAGTACCGCGTCAAGCTGACGCCCG
GCGCGCAGAAGAAGGGGAAGGCGGCGCACCAGGCCCTGGAGGTCTTCGTG
CGGGACAGGGAGGCGACGCCGCGGGAGGTGGAGCTGATCAAGGGCATCGC
CGACAACGAGCTCGTCGCCGCCTGCATGGGCGACGTCCAAGTCTCCAAGC
CCGGCATTCAGGCGGCGCTGCTCAAGGCGAAGCGCAGCAAGGCCACGGCC
AAGGTCAAGGCCTCCCGGGGGCGCTGAGGGAATGGGGGCAGGAAAAGAGG
AGGGAAAGAGGGGACACAGGGGGAAGGCCTACGAATTAAAACCTGGAAAA
TGAAATCAGTCTTA back to topCoding sequence (CDS) from alignment at KK037251.1:426248..428761- >rna9141 ID=rna9141|Name=rna9141|organism=Nannochloropsis gaditana|type=CDS|length=4176bp|location=Sequence derived from alignment at KK037251.1:426248..428761- (Nannochloropsis gaditana)
GAGTGGCTGGAGAAGGAGCTGGTGCGGCGCCGGGAGGATTTGGGCGCGAT
GGAGCTAAGGGCTCTGGCTGCTCTTCCGACAGATTCCCAGCAATGGGCAG
TCATGCGGGCCTTCGAGGCGGCCGTGGGGGCCGGGGCCCCGGGGCGGAGG
GTCCGGAGCAAAAGCGCGTTACTGGCGCAGGAGATTCAACGGCAGGTGGT
CCTCGGGAGTCAGGCCCCCGCTCTTGCCTCTAAGGGGAGGAGGGAGGGCT
GTGGCGAAGAGGTTGGGAAGGAGGATCAAGAAGGGACTGAAGAGGATGCG
ACGCCAGCCGTGAGCCGACGGGCGGCGGCCCGGGAGGAGGAGGAAGGGCT
TCTGGCGCTGCTGGAGGAGGAAGGGGTGGCGGGCGGGGGGGGCGAGGAGG
AGGCAGAGGTGGAGGAGGAGCAGCGGGAGCTGCGGCGACTGACGGGCAGG
CCGGTCTCGGAGGACCTCTTGCTCTTCGCCATGCCCGTGTGCGCGCCCTA
CTCGGCCCTGGCCCCCGCCTACTACAAGTACCGCGTCAAGCTGACGCCCG
GCGCGCAGAAGAAGGGGAAGGCGGCGCACCAGGCCCTGGAGGTCTTCGTG
CGGGACAGGGAGGCGACGCCGCGGGAGGTGGAGCTGATCAAGGGCATCGC
CGACAACGAGCTCGTCGCCGCCTGCATGGGCGACGTCCAAGTCTCCAAGC
CCGGCATTCAGGCGGCGCTGCTCAAGGCGAAGCGCAGCAAGGCCACGGCC
AAGGTCAAGGCCTCCCGGGGGCGCTGACGGGCGGGATGCGCAACAGAACG
AGCTCCTGGTCAAGCGCTACCTGCGCGTGGGCGACGCTTACGTGCATGCC
GACCTCCCCGGGGCCGCCTCCTGCGTGGTCCGGCACAAGGGCGCCTTGGG
CGGGGTGGGGGCAGAGGTCTCCCCCGTAGCGCTGCAGGAGGCGGGCTGTC
TGGCCGTCAGCCGGTCCTCGGCATGGAAGGCGAAGATGGTCACGTCGGCC
TGGTGGGTGGGGGCGGGGCAGGTGAGCAAGACGGCGCCCGCGGGGGAGTT
TCTCCCCACCGGGTCCTTCATGGTCCGGGGGAAGAAGAACTTCCTGGCGC
CGCAGCCGCTGGAGATGGGCCTGGGCCTGCTCTTCAAGCTGGACGAAGGG
AGCGTGGGGCGGCACACGAAGGAGCGGCGAGAGCGAGGGGAGGTTGGGGG
GGAGGAGGAGGGAGGGGAGGGGGAGGTGGAGCGTCGGCGGCAGATGGAGA
AGGCCGTGAAGGCGGCGGAGCGCCAGGCGGCCGCCTCTCTGAGCAAGCAG
CAGAGGAAGCGGACCCTCTCGGTCGTCCGCAAGCCCTACTGGTTCGAGAA
GTTCCACTGGTTCATCACCTCCGACAACCACCTGGTGGTCAGGAGTGGCT
GGAGAAGGAGCTGGTGCGGCGCCGGGAGGATTTGGGCGCGATGGAGCTAA
GGGCTCTGGCTGCTCTTCCGACAGATTCCCAGCAATGGGCAGTCATGCGG
GCCTTCGAGGCGGCCGTGGGGGCCGGGGCCCCGGGGCGGAGGGTCCGGAG
CAAAAGCGCGTTACTGGCGCAGGAGATTCAACGGCAGGTGGTCCTCGGGA
GTCAGGCCCCCGCTCTTGCCTCTAAGGGGAGGAGGGAGGGCTGTGGCGAA
GAGGTTGGGAAGGAGGATCAAGAAGGGACTGAAGAGGATGCGACGCCAGC
CGTGAGCCGACGGGCGGCGGCCCGGGAGGAGGAGGAAGGGCTTCTGGCGC
TGCTGGAGGAGGAAGGGGTGGCGGGCGGGGGGGGCGAGGAGGAGGCAGAG
GTGGAGGAGGAGCAGCGGGAGCTGCGGCGACTGACGGGCAGGCCGGTCTC
GGAGGACCTCTTGCTCTTCGCCATGCCCGTGTGCGCGCCCTACTCGGCCC
TGGCCCCCGCCTACTACAAGTACCGCGTCAAGCTGACGCCCGGCGCGCAG
AAGAAGGGGAAGGCGGCGCACCAGGCCCTGGAGGTCTTCGTGCGGGACAG
GGAGGCGACGCCGCGGGAGGTGGAGCTGATCAAGGGCATCGCCGACAACG
AGCTCGTCGCCGCCTGCATGGGCGACGTCCAAGTCTCCAAGCCCGGCATT
CAGGCGGCGCTGCTCAAGGCGAAGCGCAGCAAGGCCACGGCCAAGGTCAA
GGCCTCCCGGGGGCGCTGACGGGCGGGATGCGCAACAGAACGAGCTCCTG
GTCAAGCGCTACCTGCGCGTGGGCGACGCTTACGTGCATGCCGACCTCCC
CGGGGCCGCCTCCTGCGTGGTCCGGCACAAGGGCGCCTTGGGCGGGGTGG
GGGCAGAGGTCTCCCCCGTAGCGCTGCAGGAGGCGGGCTGTCTGGCCGTC
AGCCGGTCCTCGGCATGGAAGGCGAAGATGGTCACGTCGGCCTGGTGGGT
GGGGGCGGGGCAGGTGAGCAAGACGGCGCCCGCGGGGGAGTTTCTCCCCA
CCGGGTCCTTCATGGTCCGGGGGAAGAAGAACTTCCTGGCGCCGCAGCCG
CTGGAGATGGGCCTGGGCCTGCTCTTCAAGCTGGACGAAGGGAGCGTGGG
GCGGCACACGAAGGAGCGGCGAGAGCGAGGGGAGGTTGGGGGGGAGGAGG
AGGGAGGGGAGGGGGAGGTGGAGCGTCGGCGGCAGATGGAGAAGGCCGTG
AAGGCGGCGGAGCGCCAGGCGGCCGCCTCTCTGAGCAAGCAGCAGAGGAA
GCGGACCCTCTCGGTCGTCCGCAAGCCCTACTGGTTCGAGAAGTTCCACT
GGTTCATCACCTCCGACAACCACCTGGTGGTCAGGAGTGGCTGGAGAAGG
AGCTGGTGCGGCGCCGGGAGGATTTGGGCGCGATGGAGCTAAGGGCTCTG
GCTGCTCTTCCGACAGATTCCCAGCAATGGGCAGTCATGCGGGCCTTCGA
GGCGGCCGTGGGGGCCGGGGCCCCGGGGCGGAGGGTCCGGAGCAAAAGCG
CGTTACTGGCGCAGGAGATTCAACGGCAGGTGGTCCTCGGGAGTCAGGCC
CCCGCTCTTGCCTCTAAGGGGAGGAGGGAGGGCTGTGGCGAAGAGGTTGG
GAAGGAGGATCAAGAAGGGACTGAAGAGGATGCGACGCCAGCCGTGAGCC
GACGGGCGGCGGCCCGGGAGGAGGAGGAAGGGCTTCTGGCGCTGCTGGAG
GAGGAAGGGGTGGCGGGCGGGGGGGGCGAGGAGGAGGCAGAGGTGGAGGA
GGAGCAGCGGGAGCTGCGGCGACTGACGGGCAGGCCGGTCTCGGAGGACC
TCTTGCTCTTCGCCATGCCCGTGTGCGCGCCCTACTCGGCCCTGGCCCCC
GCCTACTACAAGTACCGCGTCAAGCTGACGCCCGGCGCGCAGAAGAAGGG
GAAGGCGGCGCACCAGGCCCTGGAGGTCTTCGTGCGGGACAGGGAGGCGA
CGCCGCGGGAGGTGGAGCTGATCAAGGGCATCGCCGACAACGAGCTCGTC
GCCGCCTGCATGGGCGACGTCCAAGTCTCCAAGCCCGGCATTCAGGCGGC
GCTGCTCAAGGCGAAGCGCAGCAAGGCCACGGCCAAGGTCAAGGCCTCCC
GGGGGCGCTGACGGGCGGGATGCGCAACAGAACGAGCTCCTGGTCAAGCG
CTACCTGCGCGTGGGCGACGCTTACGTGCATGCCGACCTCCCCGGGGCCG
CCTCCTGCGTGGTCCGGCACAAGGGCGCCTTGGGCGGGGTGGGGGCAGAG
GTCTCCCCCGTAGCGCTGCAGGAGGCGGGCTGTCTGGCCGTCAGCCGGTC
CTCGGCATGGAAGGCGAAGATGGTCACGTCGGCCTGGTGGGTGGGGGCGG
GGCAGGTGAGCAAGACGGCGCCCGCGGGGGAGTTTCTCCCCACCGGGTCC
TTCATGGTCCGGGGGAAGAAGAACTTCCTGGCGCCGCAGCCGCTGGAGAT
GGGCCTGGGCCTGCTCTTCAAGCTGGACGAAGGGAGCGTGGGGCGGCACA
CGAAGGAGCGGCGAGAGCGAGGGGAGGTTGGGGGGGAGGAGGAGGGAGGG
GAGGGGGAGGTGGAGCGTCGGCGGCAGATGGAGAAGGCCGTGAAGGCGGC
GGAGCGCCAGGCGGCCGCCTCTCTGAGCAAGCAGCAGAGGAAGCGGACCC
TCTCGGTCGTCCGCAAGCCCTACTGGTTCGAGAAGTTCCACTGGTTCATC
ACCTCCGACAACCACCTGGTGGTCAG back to top
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