EWM21648.1, cds9111 (CDS) Nannochloropsis gaditana

Overview
NameEWM21648.1
Unique Namecds9111
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037251.1:428613..428761 -
Alignment locationKK037251.1:427996..428461 -
Alignment locationKK037251.1:426335..427111 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM21648.1
Productnuclear export mediator factor nemf
Orig transcript idgnl|cribi|Naga_100012g94.1980.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037251.1supercontigKK037251.1:428613..428761 -
KK037251.1supercontigKK037251.1:427996..428461 -
KK037251.1supercontigKK037251.1:426335..427111 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: INTERPRO
TermDefinition
IPR008532DUF814
IPR021846DUF3441
Homology
BLAST of EWM21648.1 vs. NCBI_GenBank
Match: gi|585101903|gb|EWM21648.1| (nuclear export mediator factor nemf [Nannochloropsis gaditana])

HSP 1 Score: 918.302 bits (2372), Expect = 0.000e+0
Identity = 463/463 (100.00%), Postives = 463/463 (100.00%), Query Frame = 0
Query:    1 MEKAVKAAERQAAASLSKQQRKRTLSVVRKPYWFEKFHWFITSDNHLVVSGRDAQQNELLVKRYLRVGDAYVHADLPGAASCVVRHKGALGGVGAEVSPVALQEAGCLAVSRSSAWKAKMVTSAWWVGAGQVSKTAPAGEFLPTGSFMVRGKKNFLAPQPLEMGLGLLFKLDEGSVGRHTKERRERGEVGGEEEGGEGEVERRRQEWLEKELVRRREDLGAMELRALAALPTDSQQWAVMRAFEAAVGAGAPGRRVRSKSALLAQEIQRQVVLGSQAPALASKGRREGCGEEVGKEDQEGTEEDATPAVSRRAAAREEEEGLLALLEEEGVAGGGGEEEAEVEEEQRELRRLTGRPVSEDLLLFAMPVCAPYSALAPAYYKYRVKLTPGAQKKGKAAHQALEVFVRDREATPREVELIKGIADNELVAACMGDVQVSKPGIQAALLKAKRSKATAKVKASRGR 463
            MEKAVKAAERQAAASLSKQQRKRTLSVVRKPYWFEKFHWFITSDNHLVVSGRDAQQNELLVKRYLRVGDAYVHADLPGAASCVVRHKGALGGVGAEVSPVALQEAGCLAVSRSSAWKAKMVTSAWWVGAGQVSKTAPAGEFLPTGSFMVRGKKNFLAPQPLEMGLGLLFKLDEGSVGRHTKERRERGEVGGEEEGGEGEVERRRQEWLEKELVRRREDLGAMELRALAALPTDSQQWAVMRAFEAAVGAGAPGRRVRSKSALLAQEIQRQVVLGSQAPALASKGRREGCGEEVGKEDQEGTEEDATPAVSRRAAAREEEEGLLALLEEEGVAGGGGEEEAEVEEEQRELRRLTGRPVSEDLLLFAMPVCAPYSALAPAYYKYRVKLTPGAQKKGKAAHQALEVFVRDREATPREVELIKGIADNELVAACMGDVQVSKPGIQAALLKAKRSKATAKVKASRGR
Sbjct:    1 MEKAVKAAERQAAASLSKQQRKRTLSVVRKPYWFEKFHWFITSDNHLVVSGRDAQQNELLVKRYLRVGDAYVHADLPGAASCVVRHKGALGGVGAEVSPVALQEAGCLAVSRSSAWKAKMVTSAWWVGAGQVSKTAPAGEFLPTGSFMVRGKKNFLAPQPLEMGLGLLFKLDEGSVGRHTKERRERGEVGGEEEGGEGEVERRRQEWLEKELVRRREDLGAMELRALAALPTDSQQWAVMRAFEAAVGAGAPGRRVRSKSALLAQEIQRQVVLGSQAPALASKGRREGCGEEVGKEDQEGTEEDATPAVSRRAAAREEEEGLLALLEEEGVAGGGGEEEAEVEEEQRELRRLTGRPVSEDLLLFAMPVCAPYSALAPAYYKYRVKLTPGAQKKGKAAHQALEVFVRDREATPREVELIKGIADNELVAACMGDVQVSKPGIQAALLKAKRSKATAKVKASRGR 463          
BLAST of EWM21648.1 vs. NCBI_GenBank
Match: gi|1072236120|gb|OEU20848.1| (DUF814-domain-containing protein [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 321.242 bits (822), Expect = 3.042e-96
Identity = 202/508 (39.76%), Postives = 279/508 (54.92%), Query Frame = 0
Query:    3 KAVKAAERQAAASLSKQQRKRT---LSVVRKPYWFEKFHWFITSDNHLVVSGRDAQQNELLVKRYLRVGDAYVHADLPGAASCVVRHKGALGGVGAEVSPV-----ALQEAGCLAVSRSSAWKAKMVTSAWWVGAGQVSKTAPAGEFLPTGSFMVRGKKNFLAPQPLEMGLGLLFKL-DEGSVGRHTKERRERGEVGGEEEGGE---GEVE----RRRQEWLEKELVRRREDLGAMELRALAALPTDSQQWAVMRAFEAAVGAGAPGRRVRSKSALLA---------------QEI--QRQVVLGSQAPALASKGRR------EGCGEEVGKEDQEGTE----------------EDATPAV---------SRRAAAREEEEGLLALLEEEGVAGGGGEEEAEVEEEQRELRRLTGRPVSEDLLLFAMPVCAPYSALAPAYYKYRVKLTPGAQKKGKAAHQALEVFVRDREATPREVE-LIKGIADNELVAACMGDVQVSKPGIQAAL 445
            KA+ AAE  A   + + Q+ ++   L   RK  WFEKF+WFIT+DN+LV+ GRDAQQNE LVKRYLR GDAY+HAD+ GAASC++R K        + SP+     AL+EAG   + RSSAW ++MVTS+WWV + QVSKTAP GE+L  GSFM+RGKKNFL P  LEMGL +LF+L DE S  RH  ERR+   +  EEE  E    ++E    ++ ++ LE   V  RE   +++      + T++ Q     +     G  A  RR   K   L                Q++  QR  V+  +AP   +  +R      +   ++   +D+E  E                +   P +           +A    E+E     L EEG+  G  EEE  V++   EL +LTG+P+ EDL+LFA+PVCAPY +L+   Y YRVKLTPG  K+GKA+ Q +++F+R+  A P     LIK +ADNE V A  GDV++S  G   A+
Sbjct:  506 KALDAAEENAKRQMLEAQKNKSHISLKTKRKALWFEKFNWFITTDNYLVLGGRDAQQNEQLVKRYLRAGDAYLHADVHGAASCILRAKRERNLKTGKTSPIPLSSQALREAGNFTICRSSAWSSRMVTSSWWVESHQVSKTAPTGEYLTVGSFMIRGKKNFLPPTQLEMGLAVLFRLGDEDSFLRHKDERRDFALIQQEEEKEEPLNNDIEAVSLKKPEKNLETIQVHDRETEISIQDVNSDEIMTNTDQ----ESLPKKKGLSAKDRRQIKKYGTLEAARAAEEERNIIQQEQDLISQRSSVIVQEAPTKQTNHKRGKKAKLKRMAKKYADQDEEDRELALIALHAGEKSKKTEKKKAPQIKSDGYDGKRKNKAEKTAEQESWKNTLSEEGIIEGNNEEEDAVDDTA-ELDKLTGKPLGEDLILFAVPVCAPYQSLSK--YAYRVKLTPGNMKRGKASKQCIDMFLRE-SAVPEHCRGLIKNVADNEWVQAICGDVKISAAGASKAI 1005          
BLAST of EWM21648.1 vs. NCBI_GenBank
Match: gi|1026572033|gb|OAD59339.1| (Nuclear export mediator factor NEMF like protein [Eufriesea mexicana])

HSP 1 Score: 292.352 bits (747), Expect = 1.894e-86
Identity = 172/459 (37.47%), Postives = 254/459 (55.34%), Query Frame = 0
Query:    2 EKAVKAAERQAAASLSKQQRKRTLSVVRKPYWFEKFHWFITSDNHLVVSGRDAQQNELLVKRYLRVGDAYVHADLPGAASCVVRHKGALGGVGAEVSPVALQEAGCLAVSRSSAWKAKMVTSAWWVGAGQVSKTAPAGEFLPTGSFMVRGKKNFLAPQPLEMGLGLLFKLDEGSVGRHTKERRERGEVGGEEEGGEGEVERRRQEWLEKELVRRREDLGAMELRALAALPTDSQQWAVMRAFEAAVGAGAPGRRVRSKSALLAQEIQRQVVLGSQAPALASKGRREGCGEEVGKEDQEG-------TEEDATPAVSRRAAAREEEEGLLALLEEEGVAGGGGEEEAEVEE-----------EQRELRRLTGRPVSEDLLLFAMPVCAPYSALAPAYYKYRVKLTPGAQKKGKAAHQALEVFVRDREATPREVELIKGIADNELVAACMGDVQVSKPGIQ 442
            +KA+K+AE++   +L + Q   +++ +RK YWFEKF+WFI+S+N+LV+ GRD QQNEL+VKRYL+ GD YVHADL GA+S V+++       G+ V P  L EAG +AV+ S AW AK+V  AWWV   QVSKTAP GE+L TGSFM+RGKKN+L P  L MGLG LF+L+E S+ RH  +RR +     +++ G+                     LG  +   +     D       R+FEA      P ++   +   +  +   QVVL         KGR +   E+   +D+E         +   T    ++     +  G     +++G+      + +++ E           E   L +LTG+PV+ED LLFA+PV APY+ +    YK++VKLTPG  K+GKAA  A+ VF++D+E T RE +L+K + +  +     G V++S P IQ
Sbjct:  458 DKALKSAEKKTKQTLKEVQAIHSINKLRKIYWFEKFYWFISSENYLVIGGRDQQQNELIVKRYLKSGDVYVHADLTGASSVVIKNPD-----GSPVPPKTLAEAGTMAVAYSIAWDAKVVAGAWWVNNDQVSKTAPTGEYLTTGSFMIRGKKNYLPPCQLVMGLGFLFRLEESSIERHKDDRRVKSTAMPQKDLGDVIY------------------LGDDKPVLINIAGKD-------RSFEAK--QKPPCKKENKEQMEVVTKKNDQVVLKR-----GQKGRLKKMKEKYKDQDEEDRKLSMQVLQSAGTAKEDKKKNKNRDPSGPKQQTKKKGIMKSAPPQNSQIIENIDDEDTGPGPEVDMLDQLTGKPVTEDELLFAVPVIAPYNTVLN--YKFKVKLTPGTGKRGKAAKTAIAVFMKDKEITSRERDLLKAVKEETIARNIPGKVKISAPQIQ 877          
BLAST of EWM21648.1 vs. NCBI_GenBank
Match: gi|669223426|emb|CDW55259.1| (serologically defined colon cancer antigen [Trichuris trichiura])

HSP 1 Score: 258.455 bits (659), Expect = 1.769e-73
Identity = 176/468 (37.61%), Postives = 256/468 (54.70%), Query Frame = 0
Query:    2 EKAVKAAERQAAASLSKQQRKRTLSVVRKPYWFEKFHWFITSDNHLVVSGRDAQQNELLVKRYLRVGDAYVHADLPGAASCVVRHKGALGGV-GAEVSPVALQEAGCLAVSRSSAWKAKMVTSAWWVGAGQVSKTAPAGEFLPTGSFMVRGKKNFLAPQPLEMGLGLLFKLDEGSVGRHTKE------RRERGEV-----GGEEEGGEGEVERRRQE--------WLEKELVRRREDLGAMELRALAALPTDSQQWAVMRAFEAAVGAGAPGRRVRSKSALLAQEIQ----RQVVLGSQAPALASKGRREGCGEEVGKEDQEGTEEDATPAVSRRAAAREEEEGLLALLEEEGVAGGGGEEEAEVEEEQ-RELRRLTGRPVSEDLLLFAMPVCAPYSALAPAYYKYRVKLTPGAQKKGKAAHQALEVFVRDREATPREVELIKGIADNELVAACMGDVQVSKPGIQAA 444
            EKA+++A+++    L   + K  +  +RK +WFEKF WFI+SD  LV+ GRDAQQNEL+VKRYL+ GD YVHAD+ GA S +V+ +G         V P  L EA  +AV  S+AW+AK+V++AWWV   QVSKTAPAGE+L TGSFM+RGKKN+LAP  L +G G++F+LDE S  RH  E      ++E GEV        E+GGE   E R+ E         ++ + +         EL ++   P DS++       + A       R++R++  L  ++       + V  ++AP+  SK   E    E+  E     E DA  AV        E+EG  A  +EE       EE + V EE    ++ L G   S+ + L+A+PVC PY+A++   + Y+VKLTPG  KK  A   A+ +F++D+       +L+K I + +L     G V+VS P +  A
Sbjct:  476 EKALRSAQQKTQQELKNVRHKTNIGKIRKAFWFEKFFWFISSDRLLVIGGRDAQQNELIVKRYLKPGDIYVHADIRGATSVIVKREGIDPSARQGPVPPKTLTEAATMAVCFSAAWEAKVVSNAWWVYHDQVSKTAPAGEYLTTGSFMIRGKKNYLAPSQLLLGFGIMFRLDEDS-ARHYLESLLEEKQQEAGEVLEQDEANVEQGGETFSEERKSEKEFPFPDVKIDLKFLHPEPSTNEAELTSIVP-PMDSRKTVRQVQIQPAAIRRKERRKLRNEKKLANKKNSGLPAVKEVEATEAPSTESKAVVENGPSELP-ELASNEEVDAV-AVEEADEMTREDEGQPA--DEE-----PDEEVSTVAEETLNAVQCLVGNLKSDYVPLYALPVCGPYAAMSN--FTYKVKLTPGTTKKSSAVKTAIHLFLQDKTVGGISKDLLKVIREQDLSRNIPGKVKVSAPHLSNA 930          
BLAST of EWM21648.1 vs. NCBI_GenBank
Match: gi|1035926594|gb|OAY56182.1| (hypothetical protein MANES_03G208700 [Manihot esculenta])

HSP 1 Score: 251.521 bits (641), Expect = 3.006e-70
Identity = 151/355 (42.54%), Postives = 201/355 (56.62%), Query Frame = 0
Query:    2 EKAVKAAERQAAASLSKQQRKRTLSVVRKPYWFEKFHWFITSDNHLVVSGRDAQQNELLVKRYLRVGDAYVHADLPGAASCVVRHKGALGGVGAEVSPVALQEAGCLAVSRSSAWKAKMVTSAWWVGAGQVSKTAPAGEFLPTGSFMVRGKKNFLAPQPLEMGLGLLFKLDEGSVGRHTKERRERGEVGG----EEEGGEGEVERRRQE--WLEKELVRRRE----DLGAMELRALAALPTDSQQWAVMRAFEAAVGAGAPGRRVRSKSALLAQEIQRQVVLGSQAPALASKGRREGCGEEVGKEDQEGTEEDATPAVSRRAAAREEEEGLLALLEEEGVAGGGGEEEAEVEEEQ 346
            EKA KAAER+    LS+++   T+S +RK +WFEKF+WFI+S+N+LV+SGRDAQQNE++VKRY+  GD YVHADL GA+S V+++          V P+ L +AGC  V  S AW +K+VTSAWWV   QVSKTAP GE+L  GSFM+RGKKNFL P PL MG GLLF+LDE S+G H  ERR RGE  G    EE G   E+     E    +KELV   +    DL A     L  LP D+    + +   + +   + G  V S +  L   I R + LG   PA  S+        +V   +  G+EE       +   ++ E   L     ++G   G G+   E+E E+
Sbjct:  520 EKAFKAAERKTRIQLSQEKSVATISHMRKVHWFEKFNWFISSENYLVISGRDAQQNEMIVKRYMSKGDLYVHADLHGASSTVIKNHRP----EQPVPPLTLNQAGCFTVCHSQAWDSKIVTSAWWVYPHQVSKTAPTGEYLTVGSFMIRGKKNFLPPHPLIMGFGLLFRLDESSLGSHLNERRVRGEEEGINDFEESGPPQEISDSESEKSVTDKELVLESKNVTVDLNAEVEDPLKFLPQDATISEINKEDTSNIVGNSYG--VASVTPQLEDLIDRALGLG---PAAVSQKHYGVETSQVNMSEDHGSEEWKATGRDKPHISKAERRKL-----KKGHKNGAGDANVELENEE 860          

HSP 2 Score: 88.5817 bits (218), Expect = 6.304e-15
Identity = 54/116 (46.55%), Postives = 76/116 (65.52%), Query Frame = 0
Query:  326 LEEEGVAGGGGEEEAEVEEEQRELRRLTGRPVSEDLLLFAMPVCAPYSALAPAYYKYRVKLTPGAQKKGKAAHQALEVFVRDREATPREVELIKGIADNELVAACMGDVQVSKPGI 441
            LEE+ +   G E++ ++     +L  LTG P+  D+LL+A+PVC PYSA+    YKYRVK+ PG  KKGKAA  AL +F   +E T RE EL+K   D ELVAA +G+V+++  G+
Sbjct: 1001 LEEDDIHEIGEEDKGKL----NDLDYLTGNPLPSDILLYAVPVCGPYSAVQS--YKYRVKIVPGTAKKGKAAKTALSLFSHMQEVTSREKELMKACTDPELVAAIIGNVKITAAGL 1110          
BLAST of EWM21648.1 vs. NCBI_GenBank
Match: gi|1150115953|ref|XP_020205695.1| (nuclear export mediator factor NEMF isoform X2 [Cajanus cajan])

HSP 1 Score: 249.595 bits (636), Expect = 5.356e-70
Identity = 134/283 (47.35%), Postives = 178/283 (62.90%), Query Frame = 0
Query:    2 EKAVKAAERQAAASLSKQQRKRTLSVVRKPYWFEKFHWFITSDNHLVVSGRDAQQNELLVKRYLRVGDAYVHADLPGAASCVVRHKGALGGVGAEVSPVALQEAGCLAVSRSSAWKAKMVTSAWWVGAGQVSKTAPAGEFLPTGSFMVRGKKNFLAPQPLEMGLGLLFKLDEGSVGRHTKERRERGEVGGEEEGGE--GEVERRRQEWLEKELV--------RRREDLGAMELRALA-ALPTDSQQ--WAVMRAFEAAVGAGAPGRRVRSKSALLAQEIQRQV 271
            EKA KAAER+    LS+++   ++S +RK +WFEKF+WFI+S+N+LV+SGRDAQQNEL+VKRY+  GD YVHADL GA+S V+++   +      V P+ L +AGC  V  S AW +K+VTSAWWV   QVSKTAP GE+L  GSFM+RGKKNFL P PL MG GLLF+LDE S+G H  ERR RGE    E+  +  G +E +     EK++          R  +L A   + L+   P DS Q   A + A E A+    P +   SKS ++ +EI   +
Sbjct:  367 EKAFKAAERKTRLQLSQEKTVASISHMRKVHWFEKFNWFISSENYLVISGRDAQQNELIVKRYMSKGDLYVHADLHGASSTVIKNHKPV----QPVPPLTLNQAGCFTVCHSQAWDSKIVTSAWWVYPHQVSKTAPTGEYLTVGSFMIRGKKNFLPPHPLIMGFGLLFRLDESSLGSHLNERRVRGEEEAAEDDYDETGPLEDKSDSESEKDVADVKSATESERNGNLLADSHKPLSEDFPADSSQTSLATINA-ETAISQDFPAKET-SKSKMVDREILSDI 643          

HSP 2 Score: 86.6557 bits (213), Expect = 2.357e-14
Identity = 66/173 (38.15%), Postives = 94/173 (54.34%), Query Frame = 0
Query:  275 SQAPALASKGRREGCGEEVGKEDQEGTEEDATPAVSRRAAAREEEEGLLALLEEEGVAGGGGEEE--AEVEEEQRE----LRRLTGRPVSEDLLLFAMPVCAPYSALAPAYYKYRVKLTPGAQKKGKAAHQALEVFVRDREATPREVELIKGIADNELVAACMGDVQVSKPGI 441
            S AP +  K ++ G      KE Q+         + R A    EE   +  ++         EE+   E+ EE++E    +  LTG P+  D+LL+A+PVC PY+A+    YKYRVK+ PG  KKGKAA  A+ +F    EAT RE EL+K   D ELVAA +G+V++S  G+
Sbjct:  815 SDAPKICYKCKKAGHLSRDCKEQQDDL-------LHRHATGEAEENSKMTAIDTSQADRVAMEEDDIHEIGEEEKEKLNDVDYLTGNPLPNDILLYAVPVCGPYNAVQS--YKYRVKIIPGPAKKGKAAKTAMNLFSHMSEATSREKELMKACTDPELVAAIIGNVKISAAGL 978          
BLAST of EWM21648.1 vs. NCBI_GenBank
Match: gi|299471369|emb|CBN79324.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 251.521 bits (641), Expect = 7.833e-70
Identity = 119/183 (65.03%), Postives = 144/183 (78.69%), Query Frame = 0
Query:    2 EKAVKAAERQAAASLSKQQRKRTLSVVRKPYWFEKFHWFITSDNHLVVSGRDAQQNELLVKRYLRVGDAYVHADLPGAASCVVRHKGALGGVGAEVSPVALQEAGCLAVSRSSAWKAKMVTSAWWVGAGQVSKTAPAGEFLPTGSFMVRGKKNFLAPQPLEMGLGLLFKLDEGSVGRHTKERR 184
            EK +K AE+QA  +L +Q  KR+L V RK YWFEKF+WFI+S+N+LV+SGR+AQQNE++VK+YLR GD YVHADL GA+SCVVR+K   G     VSP+AL+EAGC+ V RS AW AKMVTSAWWV A QVSKTAP GE+L TGSFMVRG+K+FL P+ LEMG  LLFKLD+  +  H  ERR
Sbjct:  636 EKVLKIAEQQAERTLQRQAHKRSLQVARKVYWFEKFNWFISSENYLVISGRNAQQNEVVVKKYLRPGDIYVHADLHGASSCVVRNKDPSGKRA--VSPLALEEAGCMTVCRSGAWGAKMVTSAWWVYADQVSKTAPTGEYLVTGSFMVRGRKHFLPPRALEMGFALLFKLDDSCLAAHAGERR 816          

HSP 2 Score: 129.028 bits (323), Expect = 4.426e-28
Identity = 84/166 (50.60%), Postives = 105/166 (63.25%), Query Frame = 0
Query:  284 GRREGCGEEVG----KEDQE-GTEEDATPAVSRRAAAREEEEGLLALLEEEGVAGGGGEEEAEVEEEQRELRRLTGRPVSEDLLLFAMPVCAPYSALAPAYYKYRVKLTPGAQKKGKAAHQALEVFVRDREATPREVELIKGIADNELVAACMGDVQVSKPGIQAA 444
            G REG GE+       EDQE G EE+    +SRRA  + EEE +  LLEEEG A G   +         EL RLTG+P  ED+LLFA+PVC PY +L    YKY+VKLTPG QK+GKA+ QA+EVF R R+    +  L+KGI DNE VAA +GDV+V+  G+  A
Sbjct: 1186 GEREGDGEQRDAASRTEDQEAGGEEEP---LSRRAQKKREEEEVRKLLEEEG-AAGEDFDGGGDGGGVSELDRLTGKPRDEDVLLFAVPVCGPYMSLRD--YKYKVKLTPGKQKRGKASKQAIEVFSRSRDTPASQKGLMKGITDNECVAAMIGDVKVAVAGLAQA 1345          
BLAST of EWM21648.1 vs. NCBI_GenBank
Match: gi|1150115950|ref|XP_020205694.1| (nuclear export mediator factor NEMF isoform X1 [Cajanus cajan])

HSP 1 Score: 249.595 bits (636), Expect = 1.759e-69
Identity = 134/283 (47.35%), Postives = 178/283 (62.90%), Query Frame = 0
Query:    2 EKAVKAAERQAAASLSKQQRKRTLSVVRKPYWFEKFHWFITSDNHLVVSGRDAQQNELLVKRYLRVGDAYVHADLPGAASCVVRHKGALGGVGAEVSPVALQEAGCLAVSRSSAWKAKMVTSAWWVGAGQVSKTAPAGEFLPTGSFMVRGKKNFLAPQPLEMGLGLLFKLDEGSVGRHTKERRERGEVGGEEEGGE--GEVERRRQEWLEKELV--------RRREDLGAMELRALA-ALPTDSQQ--WAVMRAFEAAVGAGAPGRRVRSKSALLAQEIQRQV 271
            EKA KAAER+    LS+++   ++S +RK +WFEKF+WFI+S+N+LV+SGRDAQQNEL+VKRY+  GD YVHADL GA+S V+++   +      V P+ L +AGC  V  S AW +K+VTSAWWV   QVSKTAP GE+L  GSFM+RGKKNFL P PL MG GLLF+LDE S+G H  ERR RGE    E+  +  G +E +     EK++          R  +L A   + L+   P DS Q   A + A E A+    P +   SKS ++ +EI   +
Sbjct:  506 EKAFKAAERKTRLQLSQEKTVASISHMRKVHWFEKFNWFISSENYLVISGRDAQQNELIVKRYMSKGDLYVHADLHGASSTVIKNHKPV----QPVPPLTLNQAGCFTVCHSQAWDSKIVTSAWWVYPHQVSKTAPTGEYLTVGSFMIRGKKNFLPPHPLIMGFGLLFRLDESSLGSHLNERRVRGEEEAAEDDYDETGPLEDKSDSESEKDVADVKSATESERNGNLLADSHKPLSEDFPADSSQTSLATINA-ETAISQDFPAKET-SKSKMVDREILSDI 782          

HSP 2 Score: 87.0409 bits (214), Expect = 2.136e-14
Identity = 66/173 (38.15%), Postives = 94/173 (54.34%), Query Frame = 0
Query:  275 SQAPALASKGRREGCGEEVGKEDQEGTEEDATPAVSRRAAAREEEEGLLALLEEEGVAGGGGEEE--AEVEEEQRE----LRRLTGRPVSEDLLLFAMPVCAPYSALAPAYYKYRVKLTPGAQKKGKAAHQALEVFVRDREATPREVELIKGIADNELVAACMGDVQVSKPGI 441
            S AP +  K ++ G      KE Q+         + R A    EE   +  ++         EE+   E+ EE++E    +  LTG P+  D+LL+A+PVC PY+A+    YKYRVK+ PG  KKGKAA  A+ +F    EAT RE EL+K   D ELVAA +G+V++S  G+
Sbjct:  954 SDAPKICYKCKKAGHLSRDCKEQQDDL-------LHRHATGEAEENSKMTAIDTSQADRVAMEEDDIHEIGEEEKEKLNDVDYLTGNPLPNDILLYAVPVCGPYNAVQS--YKYRVKIIPGPAKKGKAAKTAMNLFSHMSEATSREKELMKACTDPELVAAIIGNVKISAAGL 1117          
BLAST of EWM21648.1 vs. NCBI_GenBank
Match: gi|965600572|dbj|BAT87750.1| (hypothetical protein VIGAN_05114700 [Vigna angularis var. angularis])

HSP 1 Score: 244.973 bits (624), Expect = 3.355e-69
Identity = 114/211 (54.03%), Postives = 148/211 (70.14%), Query Frame = 0
Query:    2 EKAVKAAERQAAASLSKQQRKRTLSVVRKPYWFEKFHWFITSDNHLVVSGRDAQQNELLVKRYLRVGDAYVHADLPGAASCVVRHKGALGGVGAEVSPVALQEAGCLAVSRSSAWKAKMVTSAWWVGAGQVSKTAPAGEFLPTGSFMVRGKKNFLAPQPLEMGLGLLFKLDEGSVGRHTKERRERGEVGGEEEGGEGEVERRRQEWLEKEL 212
            EKA KAAER+    L++++   ++S +RK +WFEKF+WFITS+N+LV+SGRDAQQNEL+VKRY+  GD YVHADL GA+S V+++   +      V P+ L +AGC  V  S AW +K+VTSAWWV   QVSKTAP GE+L  GSFM+RGKKNFL P PL MG GLLF+LDE S+G H  ERR RGE    ++     +E +     EK++
Sbjct:  506 EKAFKAAERKTRLQLNQEKTVASISHMRKVHWFEKFNWFITSENYLVISGRDAQQNELIVKRYMSKGDLYVHADLHGASSTVIKNHKPV----QPVPPLTLNQAGCFTVCHSQAWDSKIVTSAWWVFPHQVSKTAPTGEYLTVGSFMIRGKKNFLPPHPLIMGFGLLFRLDESSLGSHLNERRVRGEEEATDDYENANLEDKSDSESEKDV 712          
BLAST of EWM21648.1 vs. NCBI_GenBank
Match: gi|729365573|ref|XP_010546948.1| (PREDICTED: nuclear export mediator factor NEMF [Tarenaya hassleriana])

HSP 1 Score: 247.284 bits (630), Expect = 8.713e-69
Identity = 135/303 (44.55%), Postives = 181/303 (59.74%), Query Frame = 0
Query:    2 EKAVKAAERQAAASLSKQQRKRTLSVVRKPYWFEKFHWFITSDNHLVVSGRDAQQNELLVKRYLRVGDAYVHADLPGAASCVVR-HKGALGGVGAEVSPVALQEAGCLAVSRSSAWKAKMVTSAWWVGAGQVSKTAPAGEFLPTGSFMVRGKKNFLAPQPLEMGLGLLFKLDEGSVGRHTKERRERGEVGGEEEGGEGEVERRRQEWLEKELVRRREDLGAMELRALAALPTDSQQWAVMRAFEAAVGAGAP----GRRVRSKSALLAQEIQRQVVLGSQAPALASKGRREGCGEEVGKEDQE 299
            EKA KAAER+    LS+++   T+S +RK +WFEKF+WFI+S+N+LV+SGRDAQQNE++VKRY+  GD YVHADL GA+S V++ HK         V P+ L +AGC  V  S AW +K+VTSAWWV   QVSKTAP GE+L  GSFM+RGKKNFL P PL MG G+LF+LDE S+G H  ERR RGE  G  + GE          LE        ++   E+     + +   +  V R  ++A G  +     G  V S ++ L   + R + LG  A A+ SK        +  K+D++
Sbjct:  504 EKAFKAAERKTLHQLSQEKTVATISHMRKVHWFEKFNWFISSENYLVISGRDAQQNEMIVKRYMSKGDLYVHADLHGASSTVIKNHKPE-----QPVPPLTLNQAGCFTVCYSQAWDSKIVTSAWWVYPHQVSKTAPTGEYLTVGSFMIRGKKNFLPPHPLIMGFGMLFRLDESSLGAHLNERRVRGEEEGANDTGESHPPE-----LEHSDTESENEVAVEEVATTKEVDSQEPKAEVTRILDSADGMNSSSEIGGDDVASATSQLEDLLDRTLGLG--AAAVTSKNH----SMDTSKDDED 790          

HSP 2 Score: 85.1149 bits (209), Expect = 7.330e-14
Identity = 54/115 (46.96%), Postives = 75/115 (65.22%), Query Frame = 0
Query:  326 LEEEGVAGGGGEEEAEVEEEQRELRRLTGRPVSEDLLLFAMPVCAPYSALAPAYYKYRVKLTPGAQKKGKAAHQALEVFVRDREATPREVELIKGIADNELVAACMGDVQVSKPG 440
            +EEE +   G EE+ ++     ++  LTG P+  D+LL+A+PVC PY+AL    YKY+VKL PG  KKGKAA  A+ +F    EAT RE EL+K   D ELVAA +G+V+++  G
Sbjct:  953 MEEEDIHEVGEEEKGKL----IDVDYLTGNPLPTDILLYAVPVCGPYNALQS--YKYKVKLIPGTAKKGKAAKTAINLFSHMPEATTREKELMKACTDPELVAAMVGNVKITAAG 1061          
The following BLAST results are available for this feature:
BLAST of EWM21648.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585101903|gb|EWM21648.1|0.000e+0100.00nuclear export mediator factor nemf [Nannochlorops... [more]
gi|1072236120|gb|OEU20848.1|3.042e-9639.76DUF814-domain-containing protein [Fragilariopsis c... [more]
gi|1026572033|gb|OAD59339.1|1.894e-8637.47Nuclear export mediator factor NEMF like protein [... [more]
gi|669223426|emb|CDW55259.1|1.769e-7337.61serologically defined colon cancer antigen [Trichu... [more]
gi|1035926594|gb|OAY56182.1|3.006e-7042.54hypothetical protein MANES_03G208700 [Manihot escu... [more]
gi|1150115953|ref|XP_020205695.1|5.356e-7047.35nuclear export mediator factor NEMF isoform X2 [Ca... [more]
gi|299471369|emb|CBN79324.1|7.833e-7065.03conserved unknown protein [Ectocarpus siliculosus][more]
gi|1150115950|ref|XP_020205694.1|1.759e-6947.35nuclear export mediator factor NEMF isoform X1 [Ca... [more]
gi|965600572|dbj|BAT87750.1|3.355e-6954.03hypothetical protein VIGAN_05114700 [Vigna angular... [more]
gi|729365573|ref|XP_010546948.1|8.713e-6944.55PREDICTED: nuclear export mediator factor NEMF [Ta... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9141rna9141Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications