rna9139, rna9139 (mRNA) Nannochloropsis gaditana

Overview
Namerna9139
Unique Namerna9139
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length908
Alignment locationKK037251.1:421807..422965 -

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Properties
Property NameValue
Productmitochondrial ribosomal protein l37
Orig transcript idgnl|cribi|Naga_100012g92.1898.mrna
Orig protein idgnl|cribi|Naga_100012g92.1898
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037251.1supercontigKK037251.1:421807..422965 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100012g92gene8862Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna9139rna9139-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM21566.1cds9109Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna9139 ID=rna9139|Name=rna9139|organism=Nannochloropsis gaditana|type=mRNA|length=908bp
CATCTAGCCTTTACAAGCGACGAGTCCTCATCTTAAAATGGTCATTATAC
CTATAAATCATATAGCGCCGGGAGGAAATGACACAGAGTAATTTGAGACA
CCACAAGATACTTGAGGTTTGCGTCGACAGCCCCGAAGGCCTCTCAATCG
CTCTTCCCCGAGCAGATCGCATCGAGCTGTGCAGCGATCTGGACGCAGGG
GGCCTCACGCCATCATATGGTTTGATGGAGATGGCGATGGCCTTGGCCAA
ACGGCACGAGTCACCCCCACCAGTGTTGGCCATGATCCGTCCGCGCGCCG
GCGACTTCTCTTATTCGGCCTTGGAGCTCGAGACAATGGCCCGGGACATC
AAGGTAGCGCGACGCCTCGGACTGGCCGGCGTTGTGTTCGGGGTGACCGA
TGCAGAGCGAGGAGATCTCGCCGTGCAGGCGATGCTTTTCCTCACGGAGG
CCGCCAAAGGGGACGGGGAGGGTGGCGCCCCGGCCCTGAGCGTCACGCTT
CATCGAGCCATCGACCTGACCCCCGACCCGCCCGCCTGCCTCCTCGCCCT
CATACAAGCCCTGCCTCCGCGCTCTCTGGACCGAGTGCTCACCTCGGGAG
GGGCCCTCTCCGCTTGGGAGGGACGACGGAACATCGCGCGCATGGTCGAG
GCCGTGGCTGGGACCGACGTGCACATCATGGCAGGGGCGGGGGTTTGCCT
GAGCAACGTGTCGCAGCTGGTGGCGACGACCGGGGTGAGGGAGGTGCATG
CTTCGTGCAGGAGTGTGGGGGATATACGGGGCTCTGGCCGGGGGGCCGTT
GCGGAGAAAGTCCGGGCATTCGGCTTTTCGGGGGGGCAGGGCGGAGGAGT
CGTAGGGACGGACGCCGCCAAAATAGAGACTCTTGCACTGCTTGTCCATG
ATTTGTAA
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protein sequence of rna9139

>rna9139-protein ID=rna9139-protein|Name=rna9139|organism=Nannochloropsis gaditana|type=polypeptide|length=202bp
MTYFSIIQPTDTRHVDFCVGGTTHISFCHFIASSCRPHWTVSLVRMASAL
PRSSCQCVSAIWQRIATPTITATFSNSSSQCQPPVSCGMRRRLLLALPFS
TKAPAAKKGKKGGDEGGGSGAAETSVGDVSKVAPINIYKEGKDPPLLPDD
QYPEWLFDIRPLTLPEYRKMDIAKLPLREQRRYWKLLNRQVIKEKNAAGQ
KL
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mRNA from alignment at KK037251.1:421807..422965-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna9139 ID=rna9139|Name=rna9139|organism=Nannochloropsis gaditana|type=mRNA|length=1159bp|location=Sequence derived from alignment at KK037251.1:421807..422965- (Nannochloropsis gaditana)
GTGATGGAATAGGACCCCTTGATCCCGTAACATGAGATTTTCACCTTCCA
TCTCCATATCTCAGTCCTATGTACCTTGTAATGTGGCGAACATTTGGAGA
ACAGAGTTTGGGCATAACATGGTTGGATTTATGGAAGCTGTAATAATCAA
TTGAGCAAGCAGGGGCGGAAGATGATTCCATCATGTCGACGGCTTGATAC
TGTTTAGTTTCCTCTCCAACCTGAAATGACATACTTTTCCATAATCCAGC
CCACTGACACCCGGCACGTCGATTTTTGTGTGGGAGGGACAACACATATC
TCATTTTGTCACTTCATCGCATCCTCTTGTAGGCCACACTGGACCGTCTC
ACTCGTGCGGATGGCCTCGGCGCTACCCCGCTCAAGCTGTCAATGCGTTT
CTGCTATATGGCAGCGGATTGCCACACCTACAATCACCGCAACGTTTTCG
AACTCGAGCTCTCAGTGTCAGCCGCCCGTTTCTTGTGGCATGAGAAGAAG
ACTTCTCCTTGCTTTGCCTTTCTCAACCAAAGCCCCCGCAGCTAAGAAAG
GGAAGAAGGGCGGGGATGAAGGAGGGGGAAGCGGTGCGGCCGAGACTTCC
GTCGGGGACGTCTCCAAAGTGGCGCCAATCAACATTTACAAGGAGGGCAA
GGATCCACCGTTGTTGCCCGATGATCAGTACCCTGAATGGCTTTTTGACA
TACGGGTGAGGAGTGGATGCGAGCACCCTCTTGATCCCCAGTACTTTCAA
TGTTCCATTCCAGTGTTCGCCTGATTTTTATGTCTTATCCTACATGTAAC
CTTTACTGAAGGCTTGCGCAAGCCATGTCCCACTTTTTCATCTCCATGTT
TTGCCTTCAGACCCTTTTCGAGCATTCTGGACCTTCCCCCACACTTCAGC
ACCTTTCCCCCATCGACACAGCCTCTCACGCTACCTGAGTACCGAAAGAT
GGATATTGCCAAACTTCCCCTGAGAGAGCAGCGCCGATATTGGAAGCTTC
TTAATCGCCAAGTGATCAAGGAGAAGAACGCCGCCGGGCAGAAACTCTAG
TGGCGCGGGCGGGGGGAGGACAGGCGTCTCCTGACGGGTCGTGCCATGGG
GGCCGTTCGACAACATTTAGGTAGCGCAAAGAAAAAAGCTTAATCAAGTA
CGAGTGCGG
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Coding sequence (CDS) from alignment at KK037251.1:421807..422965-

>rna9139 ID=rna9139|Name=rna9139|organism=Nannochloropsis gaditana|type=CDS|length=1218bp|location=Sequence derived from alignment at KK037251.1:421807..422965- (Nannochloropsis gaditana)
CCTCTCACGCTACCTGAGTACCGAAAGATGGATATTGCCAAACTTCCCCT
GAGAGAGCAGCGCCGATATTGGAAGCTTCTTAATCGCCAAGTGATCAAGG
AGAAGAACGCCGCCGGGCAGAAACTCTAGATGACATACTTTTCCATAATC
CAGCCCACTGACACCCGGCACGTCGATTTTTGTGTGGGAGGGACAACACA
TATCTCATTTTGTCACTTCATCGCATCCTCTTGTAGGCCACACTGGACCG
TCTCACTCGTGCGGATGGCCTCGGCGCTACCCCGCTCAAGCTGTCAATGC
GTTTCTGCTATATGGCAGCGGATTGCCACACCTACAATCACCGCAACGTT
TTCGAACTCGAGCTCTCAGTGTCAGCCGCCCGTTTCTTGTGGCATGAGAA
GAAGACTTCTCCTTGCTTTGCCTTTCTCAACCAAAGCCCCCGCAGCTAAG
AAAGGGAAGAAGGGCGGGGATGAAGGAGGGGGAAGCGGTGCGGCCGAGAC
TTCCGTCGGGGACGTCTCCAAAGTGGCGCCAATCAACATTTACAAGGAGG
GCAAGGATCCACCGTTGTTGCCCGATGATCAGTACCCTGAATGGCTTTTT
GACATACGGCCTCTCACGCTACCTGAGTACCGAAAGATGGATATTGCCAA
ACTTCCCCTGAGAGAGCAGCGCCGATATTGGAAGCTTCTTAATCGCCAAG
TGATCAAGGAGAAGAACGCCGCCGGGCAGAAACTCTAGATGACATACTTT
TCCATAATCCAGCCCACTGACACCCGGCACGTCGATTTTTGTGTGGGAGG
GACAACACATATCTCATTTTGTCACTTCATCGCATCCTCTTGTAGGCCAC
ACTGGACCGTCTCACTCGTGCGGATGGCCTCGGCGCTACCCCGCTCAAGC
TGTCAATGCGTTTCTGCTATATGGCAGCGGATTGCCACACCTACAATCAC
CGCAACGTTTTCGAACTCGAGCTCTCAGTGTCAGCCGCCCGTTTCTTGTG
GCATGAGAAGAAGACTTCTCCTTGCTTTGCCTTTCTCAACCAAAGCCCCC
GCAGCTAAGAAAGGGAAGAAGGGCGGGGATGAAGGAGGGGGAAGCGGTGC
GGCCGAGACTTCCGTCGGGGACGTCTCCAAAGTGGCGCCAATCAACATTT
ACAAGGAGGGCAAGGATCCACCGTTGTTGCCCGATGATCAGTACCCTGAA
TGGCTTTTTGACATACGG
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Synonyms
Publications