rna9133, rna9133 (mRNA) Nannochloropsis gaditana

Overview
Namerna9133
Unique Namerna9133
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length720
Alignment locationKK037251.1:406578..406949 -

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Properties
Property NameValue
ProductUbiquitin-fold modifier 1
Orig transcript idgnl|cribi|Naga_100012g85.1956.mrna
Orig protein idgnl|cribi|Naga_100012g85.1956
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037251.1supercontigKK037251.1:406578..406949 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100012g85gene8856Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM21624.1cds9103Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna9133rna9133-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna9133 ID=rna9133|Name=rna9133|organism=Nannochloropsis gaditana|type=mRNA|length=720bp
ATGAGAGGTAGGTTTTGGACGCCTAAGACAAAACATAGAGTTAGCAATAA
AAAGCTTGTGACCAACAATCCGCACGTAGCCCGACTAAGCCTGGGATGCG
AATTTACAAAACAAAAGCTGCGAATAACCCAATATCCAATTGATTCTTCA
GTACAGTATATATTCTCCCTGAGAATATATACCAACGATTCACTCAAGAA
TCTTATACTAAGAAAGAAGACAGAAGAAGAAGACAAGACACTGGTCGAGG
ACACTATTTCAGCATATAGACCAGTAGCGCCCCAGAATTTCAGGTCCACT
TCTGAAAAATGCCTCGGGCCCACCAACAGTTTAGCACCGGTAGCCGCTTT
CTCGCACAGAAAAGATTTGTCAGATGAATCAAAACGATATTTGTCCGAGG
TGGAACGTCGAGACCTGGAAATGGAGCATGTTGAGCTGACAAGAGTGGGA
GATGGGGTGAGCCAGCTCAAGCAGGTAGCAGTGGACATGAACGAGCGCAT
CCAAGTCCAAAAAGCGGAACTGGACCCGATCGTAGGACAGCTGGCAGGCT
ACCGAGAGGACATCGGCGAGGTAAACCAACGCCTGAAAGCGGCGGCAAGG
AAGGGCAAGCGGTGGGGAAGCTTTGGTAGAAATCTGCTCTGCATGCTCCT
TTTGGTCGGTCAAATGATAGCTTTGGGATATCTTGTAGACTTTGTCATCA
AGGAGAACAGGAAAAGCTAA
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protein sequence of rna9133

>rna9133-protein ID=rna9133-protein|Name=rna9133|organism=Nannochloropsis gaditana|type=polypeptide|length=123bp
MASNNSNSSSCSRSKSGVDASPKVTFKVTLTSDPKLPFRVVSVPEDAPFT
AVLKYVAEEFRVPAQTSAMITNDGVGINPAQSAGNVLIKHGTELRLIPRD
RVGGVRRDRTQSKWRSHELNWLK
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mRNA from alignment at KK037251.1:406578..406949-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna9133 ID=rna9133|Name=rna9133|organism=Nannochloropsis gaditana|type=mRNA|length=372bp|location=Sequence derived from alignment at KK037251.1:406578..406949- (Nannochloropsis gaditana)
ATGGCCAGCAATAACAGCAACAGCAGCAGCTGCAGCAGAAGCAAGAGTGG
GGTGGATGCGTCCCCGAAGGTGACCTTCAAAGTCACTCTCACCTCGGACC
CGAAGCTCCCCTTCCGCGTTGTCTCTGTGCCTGAAGATGCACCCTTCACT
GCTGTGCTAAAGTATGTTGCCGAGGAGTTCAGGGTTCCGGCGCAGACGAG
CGCCATGATCACAAATGACGGAGTCGGCATCAATCCCGCGCAGTCTGCTG
GCAACGTTCTCATCAAGCACGGCACCGAGCTGCGCCTTATACCCAGGGAT
CGCGTCGGCGGTGTCCGACGTGATCGAACGCAATCTAAATGGAGAAGTCA
TGAATTAAACTGGCTGAAGTAA
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Coding sequence (CDS) from alignment at KK037251.1:406578..406949-

>rna9133 ID=rna9133|Name=rna9133|organism=Nannochloropsis gaditana|type=CDS|length=372bp|location=Sequence derived from alignment at KK037251.1:406578..406949- (Nannochloropsis gaditana)
ATGGCCAGCAATAACAGCAACAGCAGCAGCTGCAGCAGAAGCAAGAGTGG
GGTGGATGCGTCCCCGAAGGTGACCTTCAAAGTCACTCTCACCTCGGACC
CGAAGCTCCCCTTCCGCGTTGTCTCTGTGCCTGAAGATGCACCCTTCACT
GCTGTGCTAAAGTATGTTGCCGAGGAGTTCAGGGTTCCGGCGCAGACGAG
CGCCATGATCACAAATGACGGAGTCGGCATCAATCCCGCGCAGTCTGCTG
GCAACGTTCTCATCAAGCACGGCACCGAGCTGCGCCTTATACCCAGGGAT
CGCGTCGGCGGTGTCCGACGTGATCGAACGCAATCTAAATGGAGAAGTCA
TGAATTAAACTGGCTGAAGTAA
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Synonyms
Publications