rna913, rna913 (mRNA) Nannochloropsis gaditana

Overview
Namerna913
Unique Namerna913
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length297
Alignment locationCM002456.1:713982..714414 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100022g24.821.mrna
Orig protein idgnl|cribi|Naga_100022g24.821
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002456.1supercontigCM002456.1:713982..714414 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100022g24gene876Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna913rna913-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM29722.1cds913Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna913 ID=rna913|Name=rna913|organism=Nannochloropsis gaditana|type=mRNA|length=297bp
ATGCATGCACGGCCACCACGAGGACGTGGGCAGAGGCCAGCAAGGAAAGG
TGAGGATGGCCCGATGCGAGCTCAGCGACTTCGATGCATCACGGGCAGGG
GTTTGGGTTCTATTGCGGAATATAGTATGTCACGGACGCGCATGCTTCGT
ATGAAGGAAAAGACTACGGTGCAGCGTGCACACCTCCCTGGAAACCTATG
GGAGAGGGCGCCGAATAGAGCACAGCCCCAGCACCAAAGAATGAGTCACG
GAGGAGGCCAGTACGACAAAGATCTTGTTGCCAATAGCTACCCATGA
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protein sequence of rna913

>rna913-protein ID=rna913-protein|Name=rna913|organism=Nannochloropsis gaditana|type=polypeptide|length=82bp
MWSTTDYAPPREGGRQRVRGFKVSSTGKDSSAERWQSRGFLEEDGASGMD
LAAGDGYLGGEKQVHKGFYNNFGDIFNLRDLS
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mRNA from alignment at CM002456.1:713982..714414-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna913 ID=rna913|Name=rna913|organism=Nannochloropsis gaditana|type=mRNA|length=433bp|location=Sequence derived from alignment at CM002456.1:713982..714414- (Nannochloropsis gaditana)
ATGTGGAGCACAACGGACTACGCTCCACCCCGCGAAGGTGGTCGGCAGCG
GGTCCGGGGGTTTAAAGTGTCGAGTACAGGCAAAGACTCCAGTGCAGAGA
GATGGCAAAGTCGAGGATTTCTCGAGGAGGACGGAGCGAGCGGCATGGAC
TTGGCGGCTGGAGATGGTTATCTGGGCGGCGAGAAGCAAGTACACAAAGG
CTTCTACAATAACTTTGGAGACATCGTACGTGAATGGAACGGTCGGGGGT
AAGATAAAGAGTGCATGTGTTGAGTACTCACTTGTTTATCTAGTTCATTT
GTTGCTGCATTTTGGAACTGGCTTTGTGAGCCTAGTATACTAATAGATGA
GGATACCTTCCACTTTGAAAGAGACTTTCTTGACAGCTTTCCCTTGTCAT
CCCCCACAGTTCAACCTGCGCGATCTCTCCTAG
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Coding sequence (CDS) from alignment at CM002456.1:713982..714414-

>rna913 ID=rna913|Name=rna913|organism=Nannochloropsis gaditana|type=CDS|length=498bp|location=Sequence derived from alignment at CM002456.1:713982..714414- (Nannochloropsis gaditana)
TTCAACCTGCGCGATCTCTCCTAGATGTGGAGCACAACGGACTACGCTCC
ACCCCGCGAAGGTGGTCGGCAGCGGGTCCGGGGGTTTAAAGTGTCGAGTA
CAGGCAAAGACTCCAGTGCAGAGAGATGGCAAAGTCGAGGATTTCTCGAG
GAGGACGGAGCGAGCGGCATGGACTTGGCGGCTGGAGATGGTTATCTGGG
CGGCGAGAAGCAAGTACACAAAGGCTTCTACAATAACTTTGGAGACATCT
TCAACCTGCGCGATCTCTCCTAGATGTGGAGCACAACGGACTACGCTCCA
CCCCGCGAAGGTGGTCGGCAGCGGGTCCGGGGGTTTAAAGTGTCGAGTAC
AGGCAAAGACTCCAGTGCAGAGAGATGGCAAAGTCGAGGATTTCTCGAGG
AGGACGGAGCGAGCGGCATGGACTTGGCGGCTGGAGATGGTTATCTGGGC
GGCGAGAAGCAAGTACACAAAGGCTTCTACAATAACTTTGGAGACATC
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Synonyms
Publications