EWM29722.1, cds913 (CDS) Nannochloropsis gaditana

Overview
NameEWM29722.1
Unique Namecds913
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002456.1:714190..714414 -
Alignment locationCM002456.1:713982..714005 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM29722.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100022g24.821.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002456.1supercontigCM002456.1:714190..714414 -
CM002456.1supercontigCM002456.1:713982..714005 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
[Close]
BLAST of EWM29722.1 vs. NCBI_GenBank
Match: gi|585112302|gb|EWM29722.1| (hypothetical protein Naga_100022g24 [Nannochloropsis gaditana])

HSP 1 Score: 169.088 bits (427), Expect = 2.666e-53
Identity = 82/82 (100.00%), Postives = 82/82 (100.00%), Query Frame = 0 
Query:    1 MWSTTDYAPPREGGRQRVRGFKVSSTGKDSSAERWQSRGFLEEDGASGMDLAAGDGYLGGEKQVHKGFYNNFGDIFNLRDLS 82
            MWSTTDYAPPREGGRQRVRGFKVSSTGKDSSAERWQSRGFLEEDGASGMDLAAGDGYLGGEKQVHKGFYNNFGDIFNLRDLS
Sbjct:    1 MWSTTDYAPPREGGRQRVRGFKVSSTGKDSSAERWQSRGFLEEDGASGMDLAAGDGYLGGEKQVHKGFYNNFGDIFNLRDLS 82
The following BLAST results are available for this feature:
BLAST of EWM29722.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585112302|gb|EWM29722.1|2.666e-53100.00hypothetical protein Naga_100022g24 [Nannochlorops... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna913rna913Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications