|
|
Properties
| Property Name | Value |
|---|
| Product | dna-damage-inducible protein |
| Orig transcript id | gnl|cribi|Naga_100012g25.1921.mrna |
| Orig protein id | gnl|cribi|Naga_100012g25.1921 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037251.1 | supercontig | KK037251.1:272966..274916 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna9073 ID=rna9073|Name=rna9073|organism=Nannochloropsis gaditana|type=mRNA|length=1222bp
ATTGAAGGAGTTGTGAATGCGTTAGCTCTCAGACTTGAGGGTAGAAAGTG
AGGGGAATATGGGATTCCTTCAGGCTTGCTCGTGACGGGCTTGGACACCT
ATTGCCTGGACCGTCTTATTCCTAATCCTTGACGCTCTTTTTCCCCTAAG
CATCCCACCTGTAGAGCGGAAATTCAGTTAAACCCCTAAAGGCATGCTTA
TCAGACCACTTCTTCCCCTTTTCCATCTTCTGCTCCCTCCCGTCCTCCTT
GCTTTCCACCCGCAACCCCCATCGCCTTCCCCCCCGCCCTTCCCTCCTGC
AAGTCCTCAGCCCCCTTTGACATCCAGCCGCCGCGACTTCCTTTCTAGTG
TGAGCATTATTCCCTCATTCCTGTGCTTTCTTTTTGAGGCTCCACGGCCG
TCCCATGCCTCGAGCGCTCGCGAAGCTGTTGCCAAAGCGGCAAGTAAGCT
TCCCGGTTACGGCGCACCTGACACATTGTATCCCTCGTTTTTCGCGGGTG
ATTGGATGGTAACCAGGGAGGTAGTAGGCCTTGTGGTACCCCCAGAGGAA
GTCGGCAAGGTATCTCCCGAGGATCTGGCGCAAGCGACGGCGCAACAGGG
TGAAAAGCTGAAGTATCTGGTGCGGTTCCTGCCGTACGAGGCAGATGGAA
GGAGCCCGCGAAGCGAGGCCTCAGTGGAGGGACAGATATCTACGACACTG
GTAATAGCAGATCGAGGATTCAACGAGGAACAACTGTGGAAGGCCCGCCT
TGCGAAAGCGGGAAAAAGCGAGCTGTACCAAGAAGGGGTCTCGAGCCGTT
GGGACCGTGGCAACCCCAACGTCCTTACTGTCTCCTTCCCCGACGGAACG
GTTCGGGAGATCAAAGTCACAAAACGGTCCTTTGAAAATTCGGCGGTGGA
CGCCTTCGGTTCCTCAGAGTATTGCCGAGTGGCGGACGCGGCCGCCGACA
CCGGGATCGCCTCTGTTCCCCGCCTCAGTGCTTTGCGGGTCTTGCGCCGG
TTCAAGCGGGTAGGGGAAGACATCGAAGGACTGGAGCTGGTCAAATACTA
CCCCACGGTGAGCTTTAGTGCCGACCCGCCATCGATCATGACGGTGAAGG
CGCGAATAAAGATGGAGCGTTCGAGGTAGCCCAACAGGGAGGACAGGAAC
ATAAGGCTTCTCACACAAGAGACATGAAACCCCTCCGGGGGAATTGAAAA
TCACATTGTCCTCTGCACGTTT back to topprotein sequence of rna9073 >rna9073-protein ID=rna9073-protein|Name=rna9073|organism=Nannochloropsis gaditana|type=polypeptide|length=621bp
MTVLQYYSRRILSTGETPVLWVVDATTQSFSGFLRKQLCSESMKEHHLAI
RASTLACLFCVTGAFTNLHLRNAPRGRISPSLTTFPSRLHVSAPSSFRRS
GKHCVFAGSIAPAAPDDFEDGLPPDIHTATPDTDSPTSTPFQRIADSKQA
VPTLAALLRFTIPTLGIWLAGPIMSLVDTSVVGLSSDLELAGMGPATNLC
DSFIYLFTFLAVATTNLLAGALADGDEAKSQTVVSHALAIALGAGILVML
VIEFAGKRMLAATIGADGPLLIPVALKYTNIRALGAPFVLVGMVAQSSLL
GAKDSVTPLLVTLGAGAINLILDMTLVSFGKCGIAGAAAATVVAEIVGTV
VLLRALKRAQGPRRFYPFIALSSPLKDIAKFFTFAGPVFFALFGKSLCYT
SLGIAAQMMGAVPLAAHQVMLRCFFFFTTFGDSLSTTAQAFLPGFLVDDN
KLAIGKVVRRLVSISLGVGGLNAMLAGLLPSFFPGLFTTSAAIVGQMHLI
APWLSLCLLAHACTMALEGTLLAERELRFLASSYAINTLLVLVGLRRLQH
VAAGIQGVWACLLYFQVSRCIIFALRLLSKHGLLQRARRRASRMFESLGG
RTRGHGGDDPRIGGGGLSVVD back to topmRNA from alignment at KK037251.1:272966..274916+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna9073 ID=rna9073|Name=rna9073|organism=Nannochloropsis gaditana|type=mRNA|length=1951bp|location=Sequence derived from alignment at KK037251.1:272966..274916+ (Nannochloropsis gaditana)
CGAGGACAGAGTACGTCTCGTGACGTTGGCAACCCAGTCGTcatgacgaa
gaggaaatcGAAATGACCGTGCTCCAATATTATTCACGACGAATACTTAG
CACAGGCGAGACACCAGTCCTTTGGGTTGTGGATGCTACTACGCAATCAT
TTTCCGGATTCTTACGAAAGCAGCTTTGCTCAGAAAGTATGAAGGAACAC
CACCTGGCGATCCGGGCAAGCACGCTAGCGTGTCTCTTCTGCGTCACGGG
GGCTTTTACAAATCTCCATTTACGCAATGCTCCAAGAGGAAGAATTTCGC
CATCATTGACTACTTTTCCAAGTCGGCTGCATGTGTCTGCCCCATCATCA
TTCCGTCGGTCCGGAAAGCATTGCGTTTTTGCTGGATCGATTGCGCCGGC
GGCTCCTGATGATTTCGAGGATGGTCTACCGCCTGACATACACACAGCCA
CACCGGACACTGACAGTCCGACATCGACCCCTTTCCAGCGCATAGCTGAC
AGTAAACAAGCCGTGCCCACCCTGGCGGCGCTTTTGCGTTTTACTATTCC
CACGCTGGGCATATGGCTGGCCGGGCCGATCATGTCCTTGGTCGATACGA
GCGTGGTGGGCCTTTCCTCCGATTTGGAGCTGGCTGGCATGGGCCCCGCC
ACCAACCTATGCGACTCCTTCATCTATCTCTTCACATTTTTGGCGGTGGC
CACCACAAATCTTCTGGCGGGCGCGCTGGCGGATGGGGACGAAGCCAAGA
GCCAGACTGTGGTCTCGCACGCCCTCGCCATTGCCCTCGGCGCCGGTATC
CTCGTCATGCTTGTCATCGAATTCGCGGGCAAAAGAATGCTAGCTGCGAC
CATCGGTGCGGACGgcccccttctcatccctgTTGCCCTCAAGTACACCA
ACATTCGGGCCCTGGGAGCCCCCTTTGTCTTGGTGGGCATGGTCGCTcaa
tcctcccttctcgGCGCCAAGGACTCCGTCACACCGCTCCTGGTCACCCT
CGGCGCGGGTGCGATCAATTTAATCCTGGACATGACCCTGGTGTCGTTCG
GAAAGTGCGGCATTGCcggcgcggcggcggcgacagTGGTGGCAGAGATA
GTCGGGactgtcgtcctcctccgggccCTGAAACGCGCCCAGGGACCCCG
GCGTTTCTATCCTTTTatcgccctctcttccccccttaaGGACATTGCCA
AGTTCTTCACCTTTGCAGGGCCGGTCTTTTTTGCCCTGTTCGGCAAGTCG
CTCTGTTACACCTCCCTGGGCATCGCCGCGCAGATGATGGGTGCCGTGCC
CCTTGCCGCCCATCAGGTCATGCTCCgatgcttctttttcttcactACCT
TCGGcgactccctctccacaacggctcaagccttcctccccggctttCTG
GTCGACGACAACAAGCTCGCCATCGGGAAGGTGGTGCGGAGGCtcgtctc
catctccttgggGGTGGGCGGTTTGAACGCCATGCTCGCGGGCTTGCTCC
CTTCGTTTTTCCCTGGTCTTTTCACCACCAGTGCCGCCATCGTCGGCCAA
ATGCACTTGATCGCCCCGTGGCTTTCCCTGTGCCTGCTCGCGCACGCCTG
CACCATGGCCCTGGAGGGGACCTTATTGGCAGAGCGGGAGCTCCGATTTC
TCGCGTCCTCCTACGCAATCAACACCTTGCTCGTCCTGGTCGGGCTTCGG
AGGTTGCAGCACGTGGCTGCAGGGATCCAAGGGGTGTGGGCCTGTCTCTT
GTATTTTCAAGTGAGCCGGTGTATCATTTTTGCCCTGCGCCTGCTCAGCA
AGCACGGCCTGCTGCAGCGGGCAAGAAGGCGGGCATCCAGAATGTTCGAG
AgcctgggcgggaggactCGAGGACATGGTGGGGACGACCCGAGgatagg
gggggggggattaAGCGTAGTGGACTGAGGCCATGGGTGTACCAGTATGA
C back to topCoding sequence (CDS) from alignment at KK037251.1:272966..274916+ >rna9073 ID=rna9073|Name=rna9073|organism=Nannochloropsis gaditana|type=CDS|length=1866bp|location=Sequence derived from alignment at KK037251.1:272966..274916+ (Nannochloropsis gaditana)
ATGACCGTGCTCCAATATTATTCACGACGAATACTTAGCACAGGCGAGAC
ACCAGTCCTTTGGGTTGTGGATGCTACTACGCAATCATTTTCCGGATTCT
TACGAAAGCAGCTTTGCTCAGAAAGTATGAAGGAACACCACCTGGCGATC
CGGGCAAGCACGCTAGCGTGTCTCTTCTGCGTCACGGGGGCTTTTACAAA
TCTCCATTTACGCAATGCTCCAAGAGGAAGAATTTCGCCATCATTGACTA
CTTTTCCAAGTCGGCTGCATGTGTCTGCCCCATCATCATTCCGTCGGTCC
GGAAAGCATTGCGTTTTTGCTGGATCGATTGCGCCGGCGGCTCCTGATGA
TTTCGAGGATGGTCTACCGCCTGACATACACACAGCCACACCGGACACTG
ACAGTCCGACATCGACCCCTTTCCAGCGCATAGCTGACAGTAAACAAGCC
GTGCCCACCCTGGCGGCGCTTTTGCGTTTTACTATTCCCACGCTGGGCAT
ATGGCTGGCCGGGCCGATCATGTCCTTGGTCGATACGAGCGTGGTGGGCC
TTTCCTCCGATTTGGAGCTGGCTGGCATGGGCCCCGCCACCAACCTATGC
GACTCCTTCATCTATCTCTTCACATTTTTGGCGGTGGCCACCACAAATCT
TCTGGCGGGCGCGCTGGCGGATGGGGACGAAGCCAAGAGCCAGACTGTGG
TCTCGCACGCCCTCGCCATTGCCCTCGGCGCCGGTATCCTCGTCATGCTT
GTCATCGAATTCGCGGGCAAAAGAATGCTAGCTGCGACCATCGGTGCGGA
CGgcccccttctcatccctgTTGCCCTCAAGTACACCAACATTCGGGCCC
TGGGAGCCCCCTTTGTCTTGGTGGGCATGGTCGCTcaatcctcccttctc
gGCGCCAAGGACTCCGTCACACCGCTCCTGGTCACCCTCGGCGCGGGTGC
GATCAATTTAATCCTGGACATGACCCTGGTGTCGTTCGGAAAGTGCGGCA
TTGCcggcgcggcggcggcgacagTGGTGGCAGAGATAGTCGGGactgtc
gtcctcctccgggccCTGAAACGCGCCCAGGGACCCCGGCGTTTCTATCC
TTTTatcgccctctcttccccccttaaGGACATTGCCAAGTTCTTCACCT
TTGCAGGGCCGGTCTTTTTTGCCCTGTTCGGCAAGTCGCTCTGTTACACC
TCCCTGGGCATCGCCGCGCAGATGATGGGTGCCGTGCCCCTTGCCGCCCA
TCAGGTCATGCTCCgatgcttctttttcttcactACCTTCGGcgactccc
tctccacaacggctcaagccttcctccccggctttCTGGTCGACGACAAC
AAGCTCGCCATCGGGAAGGTGGTGCGGAGGCtcgtctccatctccttggg
GGTGGGCGGTTTGAACGCCATGCTCGCGGGCTTGCTCCCTTCGTTTTTCC
CTGGTCTTTTCACCACCAGTGCCGCCATCGTCGGCCAAATGCACTTGATC
GCCCCGTGGCTTTCCCTGTGCCTGCTCGCGCACGCCTGCACCATGGCCCT
GGAGGGGACCTTATTGGCAGAGCGGGAGCTCCGATTTCTCGCGTCCTCCT
ACGCAATCAACACCTTGCTCGTCCTGGTCGGGCTTCGGAGGTTGCAGCAC
GTGGCTGCAGGGATCCAAGGGGTGTGGGCCTGTCTCTTGTATTTTCAAGT
GAGCCGGTGTATCATTTTTGCCCTGCGCCTGCTCAGCAAGCACGGCCTGC
TGCAGCGGGCAAGAAGGCGGGCATCCAGAATGTTCGAGAgcctgggcggg
aggactCGAGGACATGGTGGGGACGACCCGAGgatagggggggggggatt
aAGCGTAGTGGACTGA back to top
|