EWM21589.1, cds9043 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM21589.1 vs. NCBI_GenBank
Match: gi|585101844|gb|EWM21589.1| (dna-damage-inducible protein [Nannochloropsis gaditana]) HSP 1 Score: 1239.17 bits (3205), Expect = 0.000e+0 Identity = 621/621 (100.00%), Postives = 621/621 (100.00%), Query Frame = 0
Query: 1 MTVLQYYSRRILSTGETPVLWVVDATTQSFSGFLRKQLCSESMKEHHLAIRASTLACLFCVTGAFTNLHLRNAPRGRISPSLTTFPSRLHVSAPSSFRRSGKHCVFAGSIAPAAPDDFEDGLPPDIHTATPDTDSPTSTPFQRIADSKQAVPTLAALLRFTIPTLGIWLAGPIMSLVDTSVVGLSSDLELAGMGPATNLCDSFIYLFTFLAVATTNLLAGALADGDEAKSQTVVSHALAIALGAGILVMLVIEFAGKRMLAATIGADGPLLIPVALKYTNIRALGAPFVLVGMVAQSSLLGAKDSVTPLLVTLGAGAINLILDMTLVSFGKCGIAGAAAATVVAEIVGTVVLLRALKRAQGPRRFYPFIALSSPLKDIAKFFTFAGPVFFALFGKSLCYTSLGIAAQMMGAVPLAAHQVMLRCFFFFTTFGDSLSTTAQAFLPGFLVDDNKLAIGKVVRRLVSISLGVGGLNAMLAGLLPSFFPGLFTTSAAIVGQMHLIAPWLSLCLLAHACTMALEGTLLAERELRFLASSYAINTLLVLVGLRRLQHVAAGIQGVWACLLYFQVSRCIIFALRLLSKHGLLQRARRRASRMFESLGGRTRGHGGDDPRIGGGGLSVVD 621
MTVLQYYSRRILSTGETPVLWVVDATTQSFSGFLRKQLCSESMKEHHLAIRASTLACLFCVTGAFTNLHLRNAPRGRISPSLTTFPSRLHVSAPSSFRRSGKHCVFAGSIAPAAPDDFEDGLPPDIHTATPDTDSPTSTPFQRIADSKQAVPTLAALLRFTIPTLGIWLAGPIMSLVDTSVVGLSSDLELAGMGPATNLCDSFIYLFTFLAVATTNLLAGALADGDEAKSQTVVSHALAIALGAGILVMLVIEFAGKRMLAATIGADGPLLIPVALKYTNIRALGAPFVLVGMVAQSSLLGAKDSVTPLLVTLGAGAINLILDMTLVSFGKCGIAGAAAATVVAEIVGTVVLLRALKRAQGPRRFYPFIALSSPLKDIAKFFTFAGPVFFALFGKSLCYTSLGIAAQMMGAVPLAAHQVMLRCFFFFTTFGDSLSTTAQAFLPGFLVDDNKLAIGKVVRRLVSISLGVGGLNAMLAGLLPSFFPGLFTTSAAIVGQMHLIAPWLSLCLLAHACTMALEGTLLAERELRFLASSYAINTLLVLVGLRRLQHVAAGIQGVWACLLYFQVSRCIIFALRLLSKHGLLQRARRRASRMFESLGGRTRGHGGDDPRIGGGGLSVVD
Sbjct: 1 MTVLQYYSRRILSTGETPVLWVVDATTQSFSGFLRKQLCSESMKEHHLAIRASTLACLFCVTGAFTNLHLRNAPRGRISPSLTTFPSRLHVSAPSSFRRSGKHCVFAGSIAPAAPDDFEDGLPPDIHTATPDTDSPTSTPFQRIADSKQAVPTLAALLRFTIPTLGIWLAGPIMSLVDTSVVGLSSDLELAGMGPATNLCDSFIYLFTFLAVATTNLLAGALADGDEAKSQTVVSHALAIALGAGILVMLVIEFAGKRMLAATIGADGPLLIPVALKYTNIRALGAPFVLVGMVAQSSLLGAKDSVTPLLVTLGAGAINLILDMTLVSFGKCGIAGAAAATVVAEIVGTVVLLRALKRAQGPRRFYPFIALSSPLKDIAKFFTFAGPVFFALFGKSLCYTSLGIAAQMMGAVPLAAHQVMLRCFFFFTTFGDSLSTTAQAFLPGFLVDDNKLAIGKVVRRLVSISLGVGGLNAMLAGLLPSFFPGLFTTSAAIVGQMHLIAPWLSLCLLAHACTMALEGTLLAERELRFLASSYAINTLLVLVGLRRLQHVAAGIQGVWACLLYFQVSRCIIFALRLLSKHGLLQRARRRASRMFESLGGRTRGHGGDDPRIGGGGLSVVD 621
BLAST of EWM21589.1 vs. NCBI_GenBank
Match: gi|298715211|emb|CBJ27883.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 309.301 bits (791), Expect = 4.146e-95 Identity = 188/406 (46.31%), Postives = 244/406 (60.10%), Query Frame = 0
Query: 157 LLRFTIPTLGIWLAGPIMSLVDTSVVGLSSDLELAGMGPATNLCDSFIYLFTFLAVATTNLLAGALADGDEAKSQTVVSHALAIALGAGILVMLVIEFAGKRMLAATIGADGPLLIPVALKYTNIRALGAPFVLVGMVAQSSLLGAKDSVTPLLVTLGAGAINLILDMTLVSFGKCGIAGAAAATVVAEIVGTVVLLRALKRAQGPRRFYPFIALSSPLKDIAKFFTFAGPVFFALFGKSLCYTSLGIAAQMMGAVPLAAHQVMLRCFFFFTTFGDSLSTTAQAFLPGFLVDDNKLAIG-------------------------------KVVRRLVSISLGVGGLNAMLAGLLPSFFPGLFTTSAAIVGQMHLIAPWLSLCLLAHACTMALEGTLLAERELRFLA 531
+L+F +PTLGIWLA PIMSLVD VVG S ELA +GPAT LC+S IY TFLA+A TNL A ALADG A++Q VV+ AL +AL G++V + ++ G R+LA G ++P AL Y+ +R LGAP + MV Q++ LGA+DSVTPL V L A A+N + D V G+ GAAAAT AE V V+L A+ RAQG R Y F+ L S +++ F FAGP+ FAL GK LCY+ + + +G +PLA H VMLR FFFF TFG++LS TAQAF+PG L + + ++R+++ + +GVG LNA +AGL+P P LFT S + M + P LS LL HAC M LEG LLA+R L FLA
Sbjct: 37 MLKFILPTLGIWLASPIMSLVDAGVVGTRSATELASLGPATVLCESLIYCSTFLAIAVTNLQATALADGKRAEAQKVVAQALGLALSIGLMVAVGVQAFGPRVLAQLAGEKSKEVVPAALVYSRMRILGAPASIAAMVLQAACLGARDSVTPLGVVLIASAVNGLGDWVTVCRMGMGVFGAAAATASAETVSMVLLGLAVWRAQG-ERVYKFVELPSA-EELKVFLDFAGPIAFALLGKVLCYSVMTLTVTAIGPLPLATHNVMLRVFFFFATFGEALSQTAQAFIPGQLARERSIKSAKKAARAAAAAVAGDTAAAEDSSADPRLSPARTMMRKVLILGVGVGSLNACVAGLVPLHLPHLFTNSLEVAAGMRSLTPLLSWSLLTHACVMGLEGILLAQRRLGFLA 440
BLAST of EWM21589.1 vs. NCBI_GenBank
Match: gi|567190178|ref|XP_006404573.1| (hypothetical protein EUTSA_v10000106mg [Eutrema salsugineum] >gi|567190182|ref|XP_006404574.1| hypothetical protein EUTSA_v10000106mg [Eutrema salsugineum] >gi|557105701|gb|ESQ46026.1| hypothetical protein EUTSA_v10000106mg [Eutrema salsugineum] >gi|557105702|gb|ESQ46027.1| hypothetical protein EUTSA_v10000106mg [Eutrema salsugineum]) HSP 1 Score: 268.855 bits (686), Expect = 1.584e-78 Identity = 192/539 (35.62%), Postives = 288/539 (53.43%), Query Frame = 0
Query: 81 SLTTFPSRLHVSAPSSFRRSGKHCVF------------AGSIAPAAPDDFEDGLPPDIHTATPDTDSPTSTPFQRIADSKQAVPTLAALLR----FTIPTLGIWLAGPIMSLVDTSVVGLSSDLELAGMGPATNLCDSFIYLFTFLAVATTNLLAGALADGDEAKSQTVVSHALAIALGAGILVMLVIEFAGKRMLAATIGADGPLLIPVALKYTNIRALGAPFVLVGMVAQSSLLGAKDSVTPLLVTLGAGAINLILDMTLVSFGKCGIAGAAAATVVAEIVGTVVLLRALKRAQGPRRFYPFIALSSPLKDIAKFFTFAGPVFFALFGKSLCYTSLGIAAQMMGAVPLAAHQVMLRCFFFFTTFGDSLSTTAQAFLPGFL--VDDNKLAIGKVVRRLVSISLGVGGLNAMLAGLLPSFFPGLFTTSAAIVGQMH-LIAPWLSLCLLAHACTMALEGTLLAERELRFLASS----YAINTLLVLVGLRRLQHVAAGIQGVWACLLYFQVSRCIIFALRLLSKHGLL--QRARRRASRM 594
S TF S + + P R ++C GSI+PA + E G D + + SP + + A ++ ++ FT P G+WL GP+MSL+DT+V+G S LELA +GPAT +CD Y F FL+VAT+NL+A +LA D+ + Q +S L I L G+++M+ G L A GA ++P A Y IR L P VL+G VAQS+ LG KDS PL A AIN I D+ L +F GIAGAA AT+V++IV +++ AL + +G F + + SP ++ F A PVF + K L YT L A MG +AAHQVML+ + T +G+ LS TAQ+F+P L ++ N +++ LV I +G + + +P FPG+FT + +MH +I P+ L L T +LEGTLLA R+LR+++ S +A+ L++++ L + G++G W L+ FQ +R + +RLLS++G+L + R A ++
Sbjct: 35 SFPTFRSSVSEAKPLELSRFIRNCSSPNQELVVDGGSGNGSISPATEEVIELGGGGDTNDGS---ISPVEVEIEEVKKDDLANQSIWGQMKEIVMFTGPAAGLWLCGPLMSLIDTAVIGQGSSLELAALGPATVVCDYLCYTFMFLSVATSNLVATSLARRDKDEVQHQISILLFIGLACGVMMMVFTRLFGSWALTAFTGAKNAEIVPAANTYVQIRGLAWPAVLIGWVAQSASLGMKDSWGPLKALTVASAINGIGDVVLCTFLGYGIAGAAWATMVSQIVAAYMMMDALNK-KGYSAFS--LCVPSP-SELLTIFGLAAPVFITMMSKVLFYTLLVYFATSMGTSVIAAHQVMLQTYTMSTVWGEPLSQTAQSFMPELLFGINRNLPKARMLLKSLVIIGATLGIVVGTIGTAIPWLFPGIFTQDKVVTFEMHKVIIPYF-LALSITPSTHSLEGTLLAGRDLRYISLSMTGCFAVGGLVLML----LSNGGFGLRGCWYALVGFQWARFSLALIRLLSRNGVLHSEDTSRYAEKV 561
BLAST of EWM21589.1 vs. NCBI_GenBank
Match: gi|922543846|ref|XP_013599694.1| (PREDICTED: LOW QUALITY PROTEIN: MATE efflux family protein 4, chloroplastic [Brassica oleracea var. oleracea]) HSP 1 Score: 264.233 bits (674), Expect = 6.192e-77 Identity = 175/451 (38.80%), Postives = 257/451 (56.98%), Query Frame = 0
Query: 154 LAALLRFTIPTLGIWLAGPIMSLVDTSVVGLSSDLELAGMGPATNLCDSFIYLFTFLAVATTNLLAGALADGDEAKSQTVVSHALAIALGAGILVMLVIEFAGKRMLAATIGADGPLLIPVALKYTNIRALGAPFVLVGMVAQSSLLGAKDSVTPLLVTLGAGAINLILDMTLVSFGKCGIAGAAAATVVAEIVGTVVLLRALKRAQGPRRFYPFIALSSPL-KDIAKFFTFAGPVFFALFGKSLCYTSLGIAAQMMGAVPLAAHQVMLRCFFFFTTFGDSLSTTAQAFLPGFL--VDDNKLAIGKVVRRLVSISLGVGGLNAMLAGLLPSFFPGLFTTSAAIVGQMH-LIAPWLSLCLLAHACTMALEGTLLAERELRFLA----SSYAINTLLVLVGLRRLQHVAAGIQGVWACLLYFQVSRCIIFALRLLSKHGLL--QRARRRASRM 594
+ ++ FT P G+WL GP+MSL+DT+V+G S LELA +GPAT +CD Y F FL+VAT+NL+A +LA D+ + Q +S L I L G+++M+ G L A GA ++P A Y IR L P VL+G VAQS+ LG KDS PL A AIN + D+ L +F GIAGAA AT+V+++V +++ AL ++ Y +LS P ++ F A PVF + K L YT L A MG +AAHQVML+ + T +G+ LS TAQ+F+P L V+ N +++ LV I +G + + +P FP +FT A+ QMH +I P+ L L A T +LEGTLLA R+LR+++ +A+ L+V++ L + G++G W L+ FQ +R + +RLLS+ G+L + R A ++
Sbjct: 107 MKEIVMFTGPAAGLWLCGPLMSLIDTAVIGQGSSLELAALGPATVVCDYLCYTFMFLSVATSNLVATSLARQDKDEVQHQISILLFIGLACGLMMMVFTRLFGSWALTAFTGAKNAEIVPAANTYVQIRGLAWPAVLIGWVAQSASLGMKDSWGPLKALAVASAINGVGDIVLCTFLGYGIAGAAWATMVSQVVAAYMMMDALN-----KKGYSAFSLSVPSPSELLMIFGLAAPVFITMMSKVLFYTLLVYFATSMGTSVIAAHQVMLQTYTMCTVWGEPLSQTAQSFMPELLFGVNRNLPKARMLLKSLVIIGATLGIVVGTIGTAIPWLFPSIFTHDKAVTFQMHTVIIPYF-LALFATPSTHSLEGTLLAGRDLRYISLTMTGCFAVAGLVVML----LSNGGFGLRGCWYALVGFQWARFSLALIRLLSRDGVLYSEDTSRYAEKV 547
BLAST of EWM21589.1 vs. NCBI_GenBank
Match: gi|674951838|emb|CDX82020.1| (BnaC08g35810D [Brassica napus]) HSP 1 Score: 263.848 bits (673), Expect = 1.012e-76 Identity = 175/451 (38.80%), Postives = 257/451 (56.98%), Query Frame = 0
Query: 154 LAALLRFTIPTLGIWLAGPIMSLVDTSVVGLSSDLELAGMGPATNLCDSFIYLFTFLAVATTNLLAGALADGDEAKSQTVVSHALAIALGAGILVMLVIEFAGKRMLAATIGADGPLLIPVALKYTNIRALGAPFVLVGMVAQSSLLGAKDSVTPLLVTLGAGAINLILDMTLVSFGKCGIAGAAAATVVAEIVGTVVLLRALKRAQGPRRFYPFIALSSPL-KDIAKFFTFAGPVFFALFGKSLCYTSLGIAAQMMGAVPLAAHQVMLRCFFFFTTFGDSLSTTAQAFLPGFL--VDDNKLAIGKVVRRLVSISLGVGGLNAMLAGLLPSFFPGLFTTSAAIVGQMH-LIAPWLSLCLLAHACTMALEGTLLAERELRFLA----SSYAINTLLVLVGLRRLQHVAAGIQGVWACLLYFQVSRCIIFALRLLSKHGLL--QRARRRASRM 594
+ ++ FT P G+WL GP+MSL+DT+V+G S LELA +GPAT +CD Y F FL+VAT+NL+A +LA D+ + Q +S L I L G+++M+ G L A GA ++P A Y IR L P VL+G VAQS+ LG KDS PL A AIN + D+ L +F GIAGAA AT+V+++V +++ AL ++ Y +LS P ++ F A PVF + K L YT L A MG +AAHQVML+ + T +G+ LS TAQ+F+P L V+ N +++ LV I +G + + +P FP +FT A+ QMH +I P+ L L A T +LEGTLLA R+LR+++ +A+ L+V++ L + G++G W L+ FQ +R + +RLLS+ G+L + R A ++
Sbjct: 112 MKEIVMFTGPAAGLWLCGPLMSLIDTAVIGQGSSLELAALGPATVVCDYLCYTFMFLSVATSNLVATSLARQDKDEVQHQISILLFIGLACGLMMMVFTRLFGSWALTAFTGAKNAEIVPAANTYVQIRGLAWPAVLIGWVAQSASLGMKDSWGPLKALAVASAINGVGDIVLCTFLGYGIAGAAWATMVSQVVAAYMMMDALN-----KKGYSAFSLSVPSPSELLMIFGLAAPVFITMMSKVLFYTLLVYFATSMGTSVIAAHQVMLQTYTMCTVWGEPLSQTAQSFMPELLFGVNRNLPKARMLLKSLVIIGATLGIVVGTIGTAIPWLFPSIFTHDKAVTFQMHTVIIPYF-LALFATPSTHSLEGTLLAGRDLRYISLTMTGCFAVAGLVVML----LSNGGFGLRGCWYALVGFQWARFSLALIRLLSRDGVLYSEDTSRYAEKV 552
BLAST of EWM21589.1 vs. NCBI_GenBank
Match: gi|255543827|ref|XP_002512976.1| (PREDICTED: protein DETOXIFICATION 46, chloroplastic [Ricinus communis] >gi|223547987|gb|EEF49479.1| DNA-damage-inducible protein f, putative [Ricinus communis]) HSP 1 Score: 262.692 bits (670), Expect = 3.415e-76 Identity = 166/448 (37.05%), Postives = 254/448 (56.70%), Query Frame = 0
Query: 146 DSKQAVPTLAALLRFTIPTLGIWLAGPIMSLVDTSVVGLSSDLELAGMGPATNLCDSFIYLFTFLAVATTNLLAGALADGDEAKSQTVVSHALAIALGAGILVMLVIEFAGKRMLAATIGADGPLLIPVALKYTNIRALGAPFVLVGMVAQSSLLGAKDSVTPLLVTLGAGAINLILDMTLVSFGKCGIAGAAAATVVAEIVGTVVLLRALKRAQGPRRFYPFIALSSPL-KDIAKFFTFAGPVFFALFGKSLCYTSLGIAAQMMGAVPLAAHQVMLRCFFFFTTFGDSLSTTAQAFLPGFLVDDNKLAIGKVVRRLVSISLGVGGLNAMLAGL----LPSFFPGLFTTSAAIVGQMHLIAPWLSLCLLAHACTMALEGTLLAERELRFLASS----YAINTLLVLVGLRRLQHVAAGIQGVWACLLYFQVSRCIIFALRLLSKHGLL 584
+S+ + ++ FT P G+W+ GP+MSL+DT+V+G S LELA +GP T LCD+ Y+F FL+++T+NL+A +LA D+ + Q +S L IAL G L++L +F G +L A G+ L+PVA Y IR L P +L+G VAQS+ LG KDS PL A AIN I D+ L F G+AGAA AT+V+++V +++ +L ++ Y ++ P D+ F A PVF + K Y+ L A MG + LAAHQVM++ F T +G+ LS TAQ+F+P + N+ ++ K R L+ + +G + +L G +P FP +FT ++ +MH + + L C ++ EGTLLA R+L+F++ S +++ L++LV R G+ G W LL FQ +R + RLLS +G+L
Sbjct: 115 ESQSIWNQIKEIVMFTAPATGLWITGPLMSLIDTAVIGQGSSLELAALGPGTVLCDNMSYVFMFLSISTSNLVATSLAKQDKNEVQHQLSVLLFIALTCGFLMILFTKFLGTSVLTAFTGSSNLHLVPVANTYVQIRGLAWPAILIGWVAQSASLGMKDSWGPLKALAVASAINGIGDIVLCRFLDYGVAGAAWATMVSQVVAAYMMIDSLN-----KKGYNACSIKVPSPSDLVTIFGIAAPVFVMMISKVAFYSLLVYFATSMGTLSLAAHQVMIQAFMTCTVWGEPLSQTAQSFMPELMYGSNR-SLTK-ARMLLKSLVIIGSILGLLLGFFGTSIPWLFPTIFTPDQKVIQEMHKVLVPFFMALAVTPCILSFEGTLLAGRDLKFVSMSMSGCFSVGALVLLVVSSR----GYGLLGCWCTLLSFQWARFFLTLQRLLSPNGIL 551
BLAST of EWM21589.1 vs. NCBI_GenBank
Match: gi|923705761|ref|XP_013660970.1| (PREDICTED: MATE efflux family protein 4, chloroplastic [Brassica napus] >gi|923705765|ref|XP_013660972.1| PREDICTED: MATE efflux family protein 4, chloroplastic [Brassica napus]) HSP 1 Score: 261.922 bits (668), Expect = 6.324e-76 Identity = 174/451 (38.58%), Postives = 256/451 (56.76%), Query Frame = 0
Query: 154 LAALLRFTIPTLGIWLAGPIMSLVDTSVVGLSSDLELAGMGPATNLCDSFIYLFTFLAVATTNLLAGALADGDEAKSQTVVSHALAIALGAGILVMLVIEFAGKRMLAATIGADGPLLIPVALKYTNIRALGAPFVLVGMVAQSSLLGAKDSVTPLLVTLGAGAINLILDMTLVSFGKCGIAGAAAATVVAEIVGTVVLLRALKRAQGPRRFYPFIALSSPL-KDIAKFFTFAGPVFFALFGKSLCYTSLGIAAQMMGAVPLAAHQVMLRCFFFFTTFGDSLSTTAQAFLPGFL--VDDNKLAIGKVVRRLVSISLGVGGLNAMLAGLLPSFFPGLFTTSAAIVGQMH-LIAPWLSLCLLAHACTMALEGTLLAERELRFLA----SSYAINTLLVLVGLRRLQHVAAGIQGVWACLLYFQVSRCIIFALRLLSKHGLL--QRARRRASRM 594
+ ++ FT P G+WL GP+MSL+DT+V+G S LELA +GPAT +CD Y F FL+VAT+NL+A +LA D+ + Q +S L I L G+++M+ G L A GA ++P A Y IR L P VL+G VAQS+ LG KDS PL A AIN + D+ L +F GIAGAA AT+V+++V +++ AL ++ Y +LS P ++ F A PVF + K L YT L A MG +AAHQVML+ + T +G+ LS TAQ+F+P L ++ N +++ LV I +G + + +P FP +FT A+ QMH +I P+ L L A T +LEGTLLA R+LR+++ +A+ L V++ L + G++G W L+ FQ +R + +RLLS+ G+L + R A ++
Sbjct: 111 MKEIVMFTGPAAGLWLCGPLMSLIDTAVIGQGSSLELAALGPATVVCDYLCYTFMFLSVATSNLVATSLARQDKDEVQHQISILLFIGLACGLMMMVFTRLFGSWALTAFTGAKNAEIVPAANTYVQIRGLAWPAVLIGWVAQSASLGMKDSWGPLKALAVASAINGVGDIVLCTFLGYGIAGAAWATMVSQVVAAYMMMDALN-----KKGYSAFSLSVPSPSELLMIFGLAAPVFITMMSKVLFYTLLVYFATSMGTSVIAAHQVMLQTYTMCTVWGEPLSQTAQSFMPELLFGINRNLPKARMLLKSLVIIGATLGIVVGTIGTAIPWLFPSIFTHDKAVTFQMHTVIIPYF-LALFATPSTHSLEGTLLAGRDLRYISLTMTGCFAVAGLAVML----LSNGGFGLRGCWYALVGFQWARFSLALIRLLSRDGVLYSEDTSRYAEKV 551
BLAST of EWM21589.1 vs. NCBI_GenBank
Match: gi|685366787|ref|XP_009117414.1| (PREDICTED: LOW QUALITY PROTEIN: protein DETOXIFICATION 46, chloroplastic [Brassica rapa]) HSP 1 Score: 261.536 bits (667), Expect = 6.923e-76 Identity = 174/451 (38.58%), Postives = 256/451 (56.76%), Query Frame = 0
Query: 154 LAALLRFTIPTLGIWLAGPIMSLVDTSVVGLSSDLELAGMGPATNLCDSFIYLFTFLAVATTNLLAGALADGDEAKSQTVVSHALAIALGAGILVMLVIEFAGKRMLAATIGADGPLLIPVALKYTNIRALGAPFVLVGMVAQSSLLGAKDSVTPLLVTLGAGAINLILDMTLVSFGKCGIAGAAAATVVAEIVGTVVLLRALKRAQGPRRFYPFIALSSPL-KDIAKFFTFAGPVFFALFGKSLCYTSLGIAAQMMGAVPLAAHQVMLRCFFFFTTFGDSLSTTAQAFLPGFL--VDDNKLAIGKVVRRLVSISLGVGGLNAMLAGLLPSFFPGLFTTSAAIVGQMH-LIAPWLSLCLLAHACTMALEGTLLAERELRFLA----SSYAINTLLVLVGLRRLQHVAAGIQGVWACLLYFQVSRCIIFALRLLSKHGLL--QRARRRASRM 594
+ ++ FT P G+WL GP+MSL+DT+V+G S LELA +GPAT +CD Y F FL+VAT+NL+A +LA D+ + Q +S L I L G+++M+ G L A GA ++P A Y IR L P VL+G VAQS+ LG KDS PL A AIN + D+ L +F GIAGAA AT+V+++V +++ AL ++ Y +LS P ++ F A PVF + K L YT L A MG +AAHQVML+ + T +G+ LS TAQ+F+P L ++ N +++ LV I +G + + +P FP +FT A+ QMH +I P+ L L A T +LEGTLLA R+LR+++ +A+ L V++ L + G++G W L+ FQ +R + +RLLS+ G+L + R A ++
Sbjct: 107 MKEIVMFTGPAAGLWLCGPLMSLIDTAVIGQGSSLELAALGPATVVCDYLCYTFMFLSVATSNLVATSLARQDKDEVQHQISILLFIGLACGLMMMVFTRLFGSWALTAFTGAKNAEIVPAANTYVQIRGLAWPAVLIGWVAQSASLGMKDSWGPLKALAVASAINGVGDIVLCTFLGYGIAGAAWATMVSQVVAAYMMMDALN-----KKGYSAFSLSVPSPSELLMIFGLAAPVFITMMSKVLFYTLLVYFATSMGTSVIAAHQVMLQTYTMCTVWGEPLSQTAQSFMPELLFGINRNLPKARMLLKSLVIIGATLGIVVGTIGTAIPWMFPSIFTHDKAVTFQMHTVIIPYF-LALFATPSTHSLEGTLLAGRDLRYISLTMTGCFAVAGLAVML----LSNGGFGLRGCWYALVGFQWARFSLALIRLLSRDGVLYSEDTSRYAEKV 547
BLAST of EWM21589.1 vs. NCBI_GenBank
Match: gi|923718557|ref|XP_013664324.1| (PREDICTED: MATE efflux family protein 4, chloroplastic-like [Brassica napus]) HSP 1 Score: 261.536 bits (667), Expect = 7.098e-76 Identity = 174/451 (38.58%), Postives = 256/451 (56.76%), Query Frame = 0
Query: 154 LAALLRFTIPTLGIWLAGPIMSLVDTSVVGLSSDLELAGMGPATNLCDSFIYLFTFLAVATTNLLAGALADGDEAKSQTVVSHALAIALGAGILVMLVIEFAGKRMLAATIGADGPLLIPVALKYTNIRALGAPFVLVGMVAQSSLLGAKDSVTPLLVTLGAGAINLILDMTLVSFGKCGIAGAAAATVVAEIVGTVVLLRALKRAQGPRRFYPFIALSSPL-KDIAKFFTFAGPVFFALFGKSLCYTSLGIAAQMMGAVPLAAHQVMLRCFFFFTTFGDSLSTTAQAFLPGFL--VDDNKLAIGKVVRRLVSISLGVGGLNAMLAGLLPSFFPGLFTTSAAIVGQMH-LIAPWLSLCLLAHACTMALEGTLLAERELRFLA----SSYAINTLLVLVGLRRLQHVAAGIQGVWACLLYFQVSRCIIFALRLLSKHGLL--QRARRRASRM 594
+ ++ FT P G+WL GP+MSL+DT+V+G S LELA +GPAT +CD Y F FL+VAT+NL+A +LA D+ + Q +S L I L G+++M+ G L A GA ++P A Y IR L P VL+G VAQS+ LG KDS PL A AIN + D+ L +F GIAGAA AT+V+++V +++ AL ++ Y +LS P ++ F A PVF + K L YT L A MG +AAHQVML+ + T +G+ LS TAQ+F+P L ++ N +++ LV I +G + + +P FP +FT A+ QMH +I P+ L L A T +LEGTLLA R+LR+++ +A+ L V++ L + G++G W L+ FQ +R + +RLLS+ G+L + R A ++
Sbjct: 111 MKEIVMFTGPAAGLWLCGPLMSLIDTAVIGQGSSLELAALGPATVVCDYLCYTFMFLSVATSNLVATSLARQDKDEVQHQISILLFIGLACGLMMMVFTRLFGSWALTAFTGAKNAEIVPAANTYVQIRGLAWPAVLIGWVAQSASLGMKDSWGPLKALAVASAINGVGDIVLCTFLGYGIAGAAWATMVSQVVAAYMMMDALN-----KKGYSAFSLSVPSPSELLMIFGLAAPVFITMMSKVLFYTLLVYFATSMGTSVIAAHQVMLQTYTMCTVWGEPLSQTAQSFMPELLFGINRNLPKARMLLKSLVIIGATLGIVVGTIGTAIPWMFPSIFTHDKAVTFQMHTVIIPYF-LALFATPSTHSLEGTLLAGRDLRYISLTMTGCFAVAGLAVML----LSNGGFGLRGCWYALVGFQWARFSLALIRLLSRDGVLYSEDTSRYAEKV 551
BLAST of EWM21589.1 vs. NCBI_GenBank
Match: gi|1072978035|ref|XP_018439374.1| (PREDICTED: protein DETOXIFICATION 46, chloroplastic [Raphanus sativus]) HSP 1 Score: 260.381 bits (664), Expect = 2.313e-75 Identity = 174/450 (38.67%), Postives = 258/450 (57.33%), Query Frame = 0
Query: 154 LAALLRFTIPTLGIWLAGPIMSLVDTSVVGLSSDLELAGMGPATNLCDSFIYLFTFLAVATTNLLAGALADGDEAKSQTVVSHALAIALGAGILVMLVIEFAGKRMLAATIGADGPLLIPVALKYTNIRALGAPFVLVGMVAQSSLLGAKDSVTPLLVTLGAGAINLILDMTLVSFGKCGIAGAAAATVVAEIVGTVVLLRALKRAQGPRRFYPFIALSSPLKDIAKFFTFAGPVFFALFGKSLCYTSLGIAAQMMGAVPLAAHQVMLRCFFFFTTFGDSLSTTAQAFLPGFL--VDDNKLAIGKVVRRLVSISLGVGGLNAMLAGLLPSFFPGLFTTSAAIVGQMH-LIAPWLSLCLLAHACTMALEGTLLAERELRFLASS----YAINTLLVLVGLRRLQHVAAGIQGVWACLLYFQVSRCIIFALRLLSKHGLL--QRARRRASRM 594
+ ++ FT P G+WL GP+MSL+DT+V+G S LELA +GPAT +CD Y F FL+VAT+NL+A +LA D+ + Q +S L I L G+++M+ G L A GA ++P A Y IR L P VL+G VAQS+ LG KDS PL A AIN + D+ L +F GIAGAA AT+V+++V +++ AL + +G F I++ SP ++ F A PVF + K L YT L A MG +AAHQVML+ + T +G+ LS TAQ+F+P L ++ N +++ LV I +G + + +P FP +FT + QMH +I P+ L L T +LEGTLLA R+LR+++ S +A+ L+V++ L + G++G W L+ FQ +R + +RLLS+ G+L + R A ++
Sbjct: 110 MKEIVMFTGPAAGLWLCGPLMSLIDTAVIGQGSSLELAALGPATVVCDYLCYTFMFLSVATSNLVATSLARQDKDEVQHQISILLFIGLSCGLMMMVFTRLFGSWALTAFTGAKNAEIVPAANTYVQIRGLAWPAVLIGWVAQSASLGMKDSWGPLKALAVASAINGVGDVVLCTFLGYGIAGAAWATMVSQVVAAYMMMDALNK-KGYSAFS--ISVPSP-SELLMIFGLAAPVFITMMSKVLFYTLLVYFAASMGTSVIAAHQVMLQTYTMCTVWGEPLSQTAQSFMPELLFGINRNLPKARMLLKSLVIIGATLGIVVGTIGTAIPWLFPSIFTHDKLVTFQMHTVIIPYF-LALFVTPSTHSLEGTLLAGRDLRYISLSMTGCFAVAGLVVML----LSNGGFGLRGCWYALVGFQWARFSLALMRLLSRDGVLYSEDTSRYAEKV 550 The following BLAST results are available for this feature:
BLAST of EWM21589.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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