EWM21589.1, cds9043 (CDS) Nannochloropsis gaditana

Overview
NameEWM21589.1
Unique Namecds9043
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037251.1:273028..274893 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM21589.1
Productdna-damage-inducible protein
Orig transcript idgnl|cribi|Naga_100012g25.1921.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037251.1supercontigKK037251.1:273028..274893 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0006810transport
GO:0042221response to chemical
GO:0055085transmembrane transport
GO:0006855drug transmembrane transport
Vocabulary: Molecular Function
TermDefinition
GO:0005215transporter activity
GO:0015238drug transmembrane transporter activity
GO:0015297antiporter activity
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR002528MATE
Homology
BLAST of EWM21589.1 vs. NCBI_GenBank
Match: gi|585101844|gb|EWM21589.1| (dna-damage-inducible protein [Nannochloropsis gaditana])

HSP 1 Score: 1239.17 bits (3205), Expect = 0.000e+0
Identity = 621/621 (100.00%), Postives = 621/621 (100.00%), Query Frame = 0
Query:    1 MTVLQYYSRRILSTGETPVLWVVDATTQSFSGFLRKQLCSESMKEHHLAIRASTLACLFCVTGAFTNLHLRNAPRGRISPSLTTFPSRLHVSAPSSFRRSGKHCVFAGSIAPAAPDDFEDGLPPDIHTATPDTDSPTSTPFQRIADSKQAVPTLAALLRFTIPTLGIWLAGPIMSLVDTSVVGLSSDLELAGMGPATNLCDSFIYLFTFLAVATTNLLAGALADGDEAKSQTVVSHALAIALGAGILVMLVIEFAGKRMLAATIGADGPLLIPVALKYTNIRALGAPFVLVGMVAQSSLLGAKDSVTPLLVTLGAGAINLILDMTLVSFGKCGIAGAAAATVVAEIVGTVVLLRALKRAQGPRRFYPFIALSSPLKDIAKFFTFAGPVFFALFGKSLCYTSLGIAAQMMGAVPLAAHQVMLRCFFFFTTFGDSLSTTAQAFLPGFLVDDNKLAIGKVVRRLVSISLGVGGLNAMLAGLLPSFFPGLFTTSAAIVGQMHLIAPWLSLCLLAHACTMALEGTLLAERELRFLASSYAINTLLVLVGLRRLQHVAAGIQGVWACLLYFQVSRCIIFALRLLSKHGLLQRARRRASRMFESLGGRTRGHGGDDPRIGGGGLSVVD 621
            MTVLQYYSRRILSTGETPVLWVVDATTQSFSGFLRKQLCSESMKEHHLAIRASTLACLFCVTGAFTNLHLRNAPRGRISPSLTTFPSRLHVSAPSSFRRSGKHCVFAGSIAPAAPDDFEDGLPPDIHTATPDTDSPTSTPFQRIADSKQAVPTLAALLRFTIPTLGIWLAGPIMSLVDTSVVGLSSDLELAGMGPATNLCDSFIYLFTFLAVATTNLLAGALADGDEAKSQTVVSHALAIALGAGILVMLVIEFAGKRMLAATIGADGPLLIPVALKYTNIRALGAPFVLVGMVAQSSLLGAKDSVTPLLVTLGAGAINLILDMTLVSFGKCGIAGAAAATVVAEIVGTVVLLRALKRAQGPRRFYPFIALSSPLKDIAKFFTFAGPVFFALFGKSLCYTSLGIAAQMMGAVPLAAHQVMLRCFFFFTTFGDSLSTTAQAFLPGFLVDDNKLAIGKVVRRLVSISLGVGGLNAMLAGLLPSFFPGLFTTSAAIVGQMHLIAPWLSLCLLAHACTMALEGTLLAERELRFLASSYAINTLLVLVGLRRLQHVAAGIQGVWACLLYFQVSRCIIFALRLLSKHGLLQRARRRASRMFESLGGRTRGHGGDDPRIGGGGLSVVD
Sbjct:    1 MTVLQYYSRRILSTGETPVLWVVDATTQSFSGFLRKQLCSESMKEHHLAIRASTLACLFCVTGAFTNLHLRNAPRGRISPSLTTFPSRLHVSAPSSFRRSGKHCVFAGSIAPAAPDDFEDGLPPDIHTATPDTDSPTSTPFQRIADSKQAVPTLAALLRFTIPTLGIWLAGPIMSLVDTSVVGLSSDLELAGMGPATNLCDSFIYLFTFLAVATTNLLAGALADGDEAKSQTVVSHALAIALGAGILVMLVIEFAGKRMLAATIGADGPLLIPVALKYTNIRALGAPFVLVGMVAQSSLLGAKDSVTPLLVTLGAGAINLILDMTLVSFGKCGIAGAAAATVVAEIVGTVVLLRALKRAQGPRRFYPFIALSSPLKDIAKFFTFAGPVFFALFGKSLCYTSLGIAAQMMGAVPLAAHQVMLRCFFFFTTFGDSLSTTAQAFLPGFLVDDNKLAIGKVVRRLVSISLGVGGLNAMLAGLLPSFFPGLFTTSAAIVGQMHLIAPWLSLCLLAHACTMALEGTLLAERELRFLASSYAINTLLVLVGLRRLQHVAAGIQGVWACLLYFQVSRCIIFALRLLSKHGLLQRARRRASRMFESLGGRTRGHGGDDPRIGGGGLSVVD 621          
BLAST of EWM21589.1 vs. NCBI_GenBank
Match: gi|298715211|emb|CBJ27883.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 309.301 bits (791), Expect = 4.146e-95
Identity = 188/406 (46.31%), Postives = 244/406 (60.10%), Query Frame = 0
Query:  157 LLRFTIPTLGIWLAGPIMSLVDTSVVGLSSDLELAGMGPATNLCDSFIYLFTFLAVATTNLLAGALADGDEAKSQTVVSHALAIALGAGILVMLVIEFAGKRMLAATIGADGPLLIPVALKYTNIRALGAPFVLVGMVAQSSLLGAKDSVTPLLVTLGAGAINLILDMTLVSFGKCGIAGAAAATVVAEIVGTVVLLRALKRAQGPRRFYPFIALSSPLKDIAKFFTFAGPVFFALFGKSLCYTSLGIAAQMMGAVPLAAHQVMLRCFFFFTTFGDSLSTTAQAFLPGFLVDDNKLAIG-------------------------------KVVRRLVSISLGVGGLNAMLAGLLPSFFPGLFTTSAAIVGQMHLIAPWLSLCLLAHACTMALEGTLLAERELRFLA 531
            +L+F +PTLGIWLA PIMSLVD  VVG  S  ELA +GPAT LC+S IY  TFLA+A TNL A ALADG  A++Q VV+ AL +AL  G++V + ++  G R+LA   G     ++P AL Y+ +R LGAP  +  MV Q++ LGA+DSVTPL V L A A+N + D   V     G+ GAAAAT  AE V  V+L  A+ RAQG  R Y F+ L S  +++  F  FAGP+ FAL GK LCY+ + +    +G +PLA H VMLR FFFF TFG++LS TAQAF+PG L  +  +                                   ++R+++ + +GVG LNA +AGL+P   P LFT S  +   M  + P LS  LL HAC M LEG LLA+R L FLA
Sbjct:   37 MLKFILPTLGIWLASPIMSLVDAGVVGTRSATELASLGPATVLCESLIYCSTFLAIAVTNLQATALADGKRAEAQKVVAQALGLALSIGLMVAVGVQAFGPRVLAQLAGEKSKEVVPAALVYSRMRILGAPASIAAMVLQAACLGARDSVTPLGVVLIASAVNGLGDWVTVCRMGMGVFGAAAATASAETVSMVLLGLAVWRAQG-ERVYKFVELPSA-EELKVFLDFAGPIAFALLGKVLCYSVMTLTVTAIGPLPLATHNVMLRVFFFFATFGEALSQTAQAFIPGQLARERSIKSAKKAARAAAAAVAGDTAAAEDSSADPRLSPARTMMRKVLILGVGVGSLNACVAGLVPLHLPHLFTNSLEVAAGMRSLTPLLSWSLLTHACVMGLEGILLAQRRLGFLA 440          
BLAST of EWM21589.1 vs. NCBI_GenBank
Match: gi|567190178|ref|XP_006404573.1| (hypothetical protein EUTSA_v10000106mg [Eutrema salsugineum] >gi|567190182|ref|XP_006404574.1| hypothetical protein EUTSA_v10000106mg [Eutrema salsugineum] >gi|557105701|gb|ESQ46026.1| hypothetical protein EUTSA_v10000106mg [Eutrema salsugineum] >gi|557105702|gb|ESQ46027.1| hypothetical protein EUTSA_v10000106mg [Eutrema salsugineum])

HSP 1 Score: 268.855 bits (686), Expect = 1.584e-78
Identity = 192/539 (35.62%), Postives = 288/539 (53.43%), Query Frame = 0
Query:   81 SLTTFPSRLHVSAPSSFRRSGKHCVF------------AGSIAPAAPDDFEDGLPPDIHTATPDTDSPTSTPFQRIADSKQAVPTLAALLR----FTIPTLGIWLAGPIMSLVDTSVVGLSSDLELAGMGPATNLCDSFIYLFTFLAVATTNLLAGALADGDEAKSQTVVSHALAIALGAGILVMLVIEFAGKRMLAATIGADGPLLIPVALKYTNIRALGAPFVLVGMVAQSSLLGAKDSVTPLLVTLGAGAINLILDMTLVSFGKCGIAGAAAATVVAEIVGTVVLLRALKRAQGPRRFYPFIALSSPLKDIAKFFTFAGPVFFALFGKSLCYTSLGIAAQMMGAVPLAAHQVMLRCFFFFTTFGDSLSTTAQAFLPGFL--VDDNKLAIGKVVRRLVSISLGVGGLNAMLAGLLPSFFPGLFTTSAAIVGQMH-LIAPWLSLCLLAHACTMALEGTLLAERELRFLASS----YAINTLLVLVGLRRLQHVAAGIQGVWACLLYFQVSRCIIFALRLLSKHGLL--QRARRRASRM 594
            S  TF S +  + P    R  ++C               GSI+PA  +  E G   D +  +    SP     + +     A  ++   ++    FT P  G+WL GP+MSL+DT+V+G  S LELA +GPAT +CD   Y F FL+VAT+NL+A +LA  D+ + Q  +S  L I L  G+++M+     G   L A  GA    ++P A  Y  IR L  P VL+G VAQS+ LG KDS  PL     A AIN I D+ L +F   GIAGAA AT+V++IV   +++ AL + +G   F   + + SP  ++   F  A PVF  +  K L YT L   A  MG   +AAHQVML+ +   T +G+ LS TAQ+F+P  L  ++ N      +++ LV I   +G +   +   +P  FPG+FT    +  +MH +I P+  L L     T +LEGTLLA R+LR+++ S    +A+  L++++    L +   G++G W  L+ FQ +R  +  +RLLS++G+L  +   R A ++
Sbjct:   35 SFPTFRSSVSEAKPLELSRFIRNCSSPNQELVVDGGSGNGSISPATEEVIELGGGGDTNDGS---ISPVEVEIEEVKKDDLANQSIWGQMKEIVMFTGPAAGLWLCGPLMSLIDTAVIGQGSSLELAALGPATVVCDYLCYTFMFLSVATSNLVATSLARRDKDEVQHQISILLFIGLACGVMMMVFTRLFGSWALTAFTGAKNAEIVPAANTYVQIRGLAWPAVLIGWVAQSASLGMKDSWGPLKALTVASAINGIGDVVLCTFLGYGIAGAAWATMVSQIVAAYMMMDALNK-KGYSAFS--LCVPSP-SELLTIFGLAAPVFITMMSKVLFYTLLVYFATSMGTSVIAAHQVMLQTYTMSTVWGEPLSQTAQSFMPELLFGINRNLPKARMLLKSLVIIGATLGIVVGTIGTAIPWLFPGIFTQDKVVTFEMHKVIIPYF-LALSITPSTHSLEGTLLAGRDLRYISLSMTGCFAVGGLVLML----LSNGGFGLRGCWYALVGFQWARFSLALIRLLSRNGVLHSEDTSRYAEKV 561          
BLAST of EWM21589.1 vs. NCBI_GenBank
Match: gi|922543846|ref|XP_013599694.1| (PREDICTED: LOW QUALITY PROTEIN: MATE efflux family protein 4, chloroplastic [Brassica oleracea var. oleracea])

HSP 1 Score: 264.233 bits (674), Expect = 6.192e-77
Identity = 175/451 (38.80%), Postives = 257/451 (56.98%), Query Frame = 0
Query:  154 LAALLRFTIPTLGIWLAGPIMSLVDTSVVGLSSDLELAGMGPATNLCDSFIYLFTFLAVATTNLLAGALADGDEAKSQTVVSHALAIALGAGILVMLVIEFAGKRMLAATIGADGPLLIPVALKYTNIRALGAPFVLVGMVAQSSLLGAKDSVTPLLVTLGAGAINLILDMTLVSFGKCGIAGAAAATVVAEIVGTVVLLRALKRAQGPRRFYPFIALSSPL-KDIAKFFTFAGPVFFALFGKSLCYTSLGIAAQMMGAVPLAAHQVMLRCFFFFTTFGDSLSTTAQAFLPGFL--VDDNKLAIGKVVRRLVSISLGVGGLNAMLAGLLPSFFPGLFTTSAAIVGQMH-LIAPWLSLCLLAHACTMALEGTLLAERELRFLA----SSYAINTLLVLVGLRRLQHVAAGIQGVWACLLYFQVSRCIIFALRLLSKHGLL--QRARRRASRM 594
            +  ++ FT P  G+WL GP+MSL+DT+V+G  S LELA +GPAT +CD   Y F FL+VAT+NL+A +LA  D+ + Q  +S  L I L  G+++M+     G   L A  GA    ++P A  Y  IR L  P VL+G VAQS+ LG KDS  PL     A AIN + D+ L +F   GIAGAA AT+V+++V   +++ AL      ++ Y   +LS P   ++   F  A PVF  +  K L YT L   A  MG   +AAHQVML+ +   T +G+ LS TAQ+F+P  L  V+ N      +++ LV I   +G +   +   +P  FP +FT   A+  QMH +I P+  L L A   T +LEGTLLA R+LR+++      +A+  L+V++    L +   G++G W  L+ FQ +R  +  +RLLS+ G+L  +   R A ++
Sbjct:  107 MKEIVMFTGPAAGLWLCGPLMSLIDTAVIGQGSSLELAALGPATVVCDYLCYTFMFLSVATSNLVATSLARQDKDEVQHQISILLFIGLACGLMMMVFTRLFGSWALTAFTGAKNAEIVPAANTYVQIRGLAWPAVLIGWVAQSASLGMKDSWGPLKALAVASAINGVGDIVLCTFLGYGIAGAAWATMVSQVVAAYMMMDALN-----KKGYSAFSLSVPSPSELLMIFGLAAPVFITMMSKVLFYTLLVYFATSMGTSVIAAHQVMLQTYTMCTVWGEPLSQTAQSFMPELLFGVNRNLPKARMLLKSLVIIGATLGIVVGTIGTAIPWLFPSIFTHDKAVTFQMHTVIIPYF-LALFATPSTHSLEGTLLAGRDLRYISLTMTGCFAVAGLVVML----LSNGGFGLRGCWYALVGFQWARFSLALIRLLSRDGVLYSEDTSRYAEKV 547          
BLAST of EWM21589.1 vs. NCBI_GenBank
Match: gi|674951838|emb|CDX82020.1| (BnaC08g35810D [Brassica napus])

HSP 1 Score: 263.848 bits (673), Expect = 1.012e-76
Identity = 175/451 (38.80%), Postives = 257/451 (56.98%), Query Frame = 0
Query:  154 LAALLRFTIPTLGIWLAGPIMSLVDTSVVGLSSDLELAGMGPATNLCDSFIYLFTFLAVATTNLLAGALADGDEAKSQTVVSHALAIALGAGILVMLVIEFAGKRMLAATIGADGPLLIPVALKYTNIRALGAPFVLVGMVAQSSLLGAKDSVTPLLVTLGAGAINLILDMTLVSFGKCGIAGAAAATVVAEIVGTVVLLRALKRAQGPRRFYPFIALSSPL-KDIAKFFTFAGPVFFALFGKSLCYTSLGIAAQMMGAVPLAAHQVMLRCFFFFTTFGDSLSTTAQAFLPGFL--VDDNKLAIGKVVRRLVSISLGVGGLNAMLAGLLPSFFPGLFTTSAAIVGQMH-LIAPWLSLCLLAHACTMALEGTLLAERELRFLA----SSYAINTLLVLVGLRRLQHVAAGIQGVWACLLYFQVSRCIIFALRLLSKHGLL--QRARRRASRM 594
            +  ++ FT P  G+WL GP+MSL+DT+V+G  S LELA +GPAT +CD   Y F FL+VAT+NL+A +LA  D+ + Q  +S  L I L  G+++M+     G   L A  GA    ++P A  Y  IR L  P VL+G VAQS+ LG KDS  PL     A AIN + D+ L +F   GIAGAA AT+V+++V   +++ AL      ++ Y   +LS P   ++   F  A PVF  +  K L YT L   A  MG   +AAHQVML+ +   T +G+ LS TAQ+F+P  L  V+ N      +++ LV I   +G +   +   +P  FP +FT   A+  QMH +I P+  L L A   T +LEGTLLA R+LR+++      +A+  L+V++    L +   G++G W  L+ FQ +R  +  +RLLS+ G+L  +   R A ++
Sbjct:  112 MKEIVMFTGPAAGLWLCGPLMSLIDTAVIGQGSSLELAALGPATVVCDYLCYTFMFLSVATSNLVATSLARQDKDEVQHQISILLFIGLACGLMMMVFTRLFGSWALTAFTGAKNAEIVPAANTYVQIRGLAWPAVLIGWVAQSASLGMKDSWGPLKALAVASAINGVGDIVLCTFLGYGIAGAAWATMVSQVVAAYMMMDALN-----KKGYSAFSLSVPSPSELLMIFGLAAPVFITMMSKVLFYTLLVYFATSMGTSVIAAHQVMLQTYTMCTVWGEPLSQTAQSFMPELLFGVNRNLPKARMLLKSLVIIGATLGIVVGTIGTAIPWLFPSIFTHDKAVTFQMHTVIIPYF-LALFATPSTHSLEGTLLAGRDLRYISLTMTGCFAVAGLVVML----LSNGGFGLRGCWYALVGFQWARFSLALIRLLSRDGVLYSEDTSRYAEKV 552          
BLAST of EWM21589.1 vs. NCBI_GenBank
Match: gi|255543827|ref|XP_002512976.1| (PREDICTED: protein DETOXIFICATION 46, chloroplastic [Ricinus communis] >gi|223547987|gb|EEF49479.1| DNA-damage-inducible protein f, putative [Ricinus communis])

HSP 1 Score: 262.692 bits (670), Expect = 3.415e-76
Identity = 166/448 (37.05%), Postives = 254/448 (56.70%), Query Frame = 0
Query:  146 DSKQAVPTLAALLRFTIPTLGIWLAGPIMSLVDTSVVGLSSDLELAGMGPATNLCDSFIYLFTFLAVATTNLLAGALADGDEAKSQTVVSHALAIALGAGILVMLVIEFAGKRMLAATIGADGPLLIPVALKYTNIRALGAPFVLVGMVAQSSLLGAKDSVTPLLVTLGAGAINLILDMTLVSFGKCGIAGAAAATVVAEIVGTVVLLRALKRAQGPRRFYPFIALSSPL-KDIAKFFTFAGPVFFALFGKSLCYTSLGIAAQMMGAVPLAAHQVMLRCFFFFTTFGDSLSTTAQAFLPGFLVDDNKLAIGKVVRRLVSISLGVGGLNAMLAGL----LPSFFPGLFTTSAAIVGQMHLIAPWLSLCLLAHACTMALEGTLLAERELRFLASS----YAINTLLVLVGLRRLQHVAAGIQGVWACLLYFQVSRCIIFALRLLSKHGLL 584
            +S+     +  ++ FT P  G+W+ GP+MSL+DT+V+G  S LELA +GP T LCD+  Y+F FL+++T+NL+A +LA  D+ + Q  +S  L IAL  G L++L  +F G  +L A  G+    L+PVA  Y  IR L  P +L+G VAQS+ LG KDS  PL     A AIN I D+ L  F   G+AGAA AT+V+++V   +++ +L      ++ Y   ++  P   D+   F  A PVF  +  K   Y+ L   A  MG + LAAHQVM++ F   T +G+ LS TAQ+F+P  +   N+ ++ K  R L+   + +G +  +L G     +P  FP +FT    ++ +MH +     + L    C ++ EGTLLA R+L+F++ S    +++  L++LV   R      G+ G W  LL FQ +R  +   RLLS +G+L
Sbjct:  115 ESQSIWNQIKEIVMFTAPATGLWITGPLMSLIDTAVIGQGSSLELAALGPGTVLCDNMSYVFMFLSISTSNLVATSLAKQDKNEVQHQLSVLLFIALTCGFLMILFTKFLGTSVLTAFTGSSNLHLVPVANTYVQIRGLAWPAILIGWVAQSASLGMKDSWGPLKALAVASAINGIGDIVLCRFLDYGVAGAAWATMVSQVVAAYMMIDSLN-----KKGYNACSIKVPSPSDLVTIFGIAAPVFVMMISKVAFYSLLVYFATSMGTLSLAAHQVMIQAFMTCTVWGEPLSQTAQSFMPELMYGSNR-SLTK-ARMLLKSLVIIGSILGLLLGFFGTSIPWLFPTIFTPDQKVIQEMHKVLVPFFMALAVTPCILSFEGTLLAGRDLKFVSMSMSGCFSVGALVLLVVSSR----GYGLLGCWCTLLSFQWARFFLTLQRLLSPNGIL 551          
BLAST of EWM21589.1 vs. NCBI_GenBank
Match: gi|923705761|ref|XP_013660970.1| (PREDICTED: MATE efflux family protein 4, chloroplastic [Brassica napus] >gi|923705765|ref|XP_013660972.1| PREDICTED: MATE efflux family protein 4, chloroplastic [Brassica napus])

HSP 1 Score: 261.922 bits (668), Expect = 6.324e-76
Identity = 174/451 (38.58%), Postives = 256/451 (56.76%), Query Frame = 0
Query:  154 LAALLRFTIPTLGIWLAGPIMSLVDTSVVGLSSDLELAGMGPATNLCDSFIYLFTFLAVATTNLLAGALADGDEAKSQTVVSHALAIALGAGILVMLVIEFAGKRMLAATIGADGPLLIPVALKYTNIRALGAPFVLVGMVAQSSLLGAKDSVTPLLVTLGAGAINLILDMTLVSFGKCGIAGAAAATVVAEIVGTVVLLRALKRAQGPRRFYPFIALSSPL-KDIAKFFTFAGPVFFALFGKSLCYTSLGIAAQMMGAVPLAAHQVMLRCFFFFTTFGDSLSTTAQAFLPGFL--VDDNKLAIGKVVRRLVSISLGVGGLNAMLAGLLPSFFPGLFTTSAAIVGQMH-LIAPWLSLCLLAHACTMALEGTLLAERELRFLA----SSYAINTLLVLVGLRRLQHVAAGIQGVWACLLYFQVSRCIIFALRLLSKHGLL--QRARRRASRM 594
            +  ++ FT P  G+WL GP+MSL+DT+V+G  S LELA +GPAT +CD   Y F FL+VAT+NL+A +LA  D+ + Q  +S  L I L  G+++M+     G   L A  GA    ++P A  Y  IR L  P VL+G VAQS+ LG KDS  PL     A AIN + D+ L +F   GIAGAA AT+V+++V   +++ AL      ++ Y   +LS P   ++   F  A PVF  +  K L YT L   A  MG   +AAHQVML+ +   T +G+ LS TAQ+F+P  L  ++ N      +++ LV I   +G +   +   +P  FP +FT   A+  QMH +I P+  L L A   T +LEGTLLA R+LR+++      +A+  L V++    L +   G++G W  L+ FQ +R  +  +RLLS+ G+L  +   R A ++
Sbjct:  111 MKEIVMFTGPAAGLWLCGPLMSLIDTAVIGQGSSLELAALGPATVVCDYLCYTFMFLSVATSNLVATSLARQDKDEVQHQISILLFIGLACGLMMMVFTRLFGSWALTAFTGAKNAEIVPAANTYVQIRGLAWPAVLIGWVAQSASLGMKDSWGPLKALAVASAINGVGDIVLCTFLGYGIAGAAWATMVSQVVAAYMMMDALN-----KKGYSAFSLSVPSPSELLMIFGLAAPVFITMMSKVLFYTLLVYFATSMGTSVIAAHQVMLQTYTMCTVWGEPLSQTAQSFMPELLFGINRNLPKARMLLKSLVIIGATLGIVVGTIGTAIPWLFPSIFTHDKAVTFQMHTVIIPYF-LALFATPSTHSLEGTLLAGRDLRYISLTMTGCFAVAGLAVML----LSNGGFGLRGCWYALVGFQWARFSLALIRLLSRDGVLYSEDTSRYAEKV 551          
BLAST of EWM21589.1 vs. NCBI_GenBank
Match: gi|685366787|ref|XP_009117414.1| (PREDICTED: LOW QUALITY PROTEIN: protein DETOXIFICATION 46, chloroplastic [Brassica rapa])

HSP 1 Score: 261.536 bits (667), Expect = 6.923e-76
Identity = 174/451 (38.58%), Postives = 256/451 (56.76%), Query Frame = 0
Query:  154 LAALLRFTIPTLGIWLAGPIMSLVDTSVVGLSSDLELAGMGPATNLCDSFIYLFTFLAVATTNLLAGALADGDEAKSQTVVSHALAIALGAGILVMLVIEFAGKRMLAATIGADGPLLIPVALKYTNIRALGAPFVLVGMVAQSSLLGAKDSVTPLLVTLGAGAINLILDMTLVSFGKCGIAGAAAATVVAEIVGTVVLLRALKRAQGPRRFYPFIALSSPL-KDIAKFFTFAGPVFFALFGKSLCYTSLGIAAQMMGAVPLAAHQVMLRCFFFFTTFGDSLSTTAQAFLPGFL--VDDNKLAIGKVVRRLVSISLGVGGLNAMLAGLLPSFFPGLFTTSAAIVGQMH-LIAPWLSLCLLAHACTMALEGTLLAERELRFLA----SSYAINTLLVLVGLRRLQHVAAGIQGVWACLLYFQVSRCIIFALRLLSKHGLL--QRARRRASRM 594
            +  ++ FT P  G+WL GP+MSL+DT+V+G  S LELA +GPAT +CD   Y F FL+VAT+NL+A +LA  D+ + Q  +S  L I L  G+++M+     G   L A  GA    ++P A  Y  IR L  P VL+G VAQS+ LG KDS  PL     A AIN + D+ L +F   GIAGAA AT+V+++V   +++ AL      ++ Y   +LS P   ++   F  A PVF  +  K L YT L   A  MG   +AAHQVML+ +   T +G+ LS TAQ+F+P  L  ++ N      +++ LV I   +G +   +   +P  FP +FT   A+  QMH +I P+  L L A   T +LEGTLLA R+LR+++      +A+  L V++    L +   G++G W  L+ FQ +R  +  +RLLS+ G+L  +   R A ++
Sbjct:  107 MKEIVMFTGPAAGLWLCGPLMSLIDTAVIGQGSSLELAALGPATVVCDYLCYTFMFLSVATSNLVATSLARQDKDEVQHQISILLFIGLACGLMMMVFTRLFGSWALTAFTGAKNAEIVPAANTYVQIRGLAWPAVLIGWVAQSASLGMKDSWGPLKALAVASAINGVGDIVLCTFLGYGIAGAAWATMVSQVVAAYMMMDALN-----KKGYSAFSLSVPSPSELLMIFGLAAPVFITMMSKVLFYTLLVYFATSMGTSVIAAHQVMLQTYTMCTVWGEPLSQTAQSFMPELLFGINRNLPKARMLLKSLVIIGATLGIVVGTIGTAIPWMFPSIFTHDKAVTFQMHTVIIPYF-LALFATPSTHSLEGTLLAGRDLRYISLTMTGCFAVAGLAVML----LSNGGFGLRGCWYALVGFQWARFSLALIRLLSRDGVLYSEDTSRYAEKV 547          
BLAST of EWM21589.1 vs. NCBI_GenBank
Match: gi|923718557|ref|XP_013664324.1| (PREDICTED: MATE efflux family protein 4, chloroplastic-like [Brassica napus])

HSP 1 Score: 261.536 bits (667), Expect = 7.098e-76
Identity = 174/451 (38.58%), Postives = 256/451 (56.76%), Query Frame = 0
Query:  154 LAALLRFTIPTLGIWLAGPIMSLVDTSVVGLSSDLELAGMGPATNLCDSFIYLFTFLAVATTNLLAGALADGDEAKSQTVVSHALAIALGAGILVMLVIEFAGKRMLAATIGADGPLLIPVALKYTNIRALGAPFVLVGMVAQSSLLGAKDSVTPLLVTLGAGAINLILDMTLVSFGKCGIAGAAAATVVAEIVGTVVLLRALKRAQGPRRFYPFIALSSPL-KDIAKFFTFAGPVFFALFGKSLCYTSLGIAAQMMGAVPLAAHQVMLRCFFFFTTFGDSLSTTAQAFLPGFL--VDDNKLAIGKVVRRLVSISLGVGGLNAMLAGLLPSFFPGLFTTSAAIVGQMH-LIAPWLSLCLLAHACTMALEGTLLAERELRFLA----SSYAINTLLVLVGLRRLQHVAAGIQGVWACLLYFQVSRCIIFALRLLSKHGLL--QRARRRASRM 594
            +  ++ FT P  G+WL GP+MSL+DT+V+G  S LELA +GPAT +CD   Y F FL+VAT+NL+A +LA  D+ + Q  +S  L I L  G+++M+     G   L A  GA    ++P A  Y  IR L  P VL+G VAQS+ LG KDS  PL     A AIN + D+ L +F   GIAGAA AT+V+++V   +++ AL      ++ Y   +LS P   ++   F  A PVF  +  K L YT L   A  MG   +AAHQVML+ +   T +G+ LS TAQ+F+P  L  ++ N      +++ LV I   +G +   +   +P  FP +FT   A+  QMH +I P+  L L A   T +LEGTLLA R+LR+++      +A+  L V++    L +   G++G W  L+ FQ +R  +  +RLLS+ G+L  +   R A ++
Sbjct:  111 MKEIVMFTGPAAGLWLCGPLMSLIDTAVIGQGSSLELAALGPATVVCDYLCYTFMFLSVATSNLVATSLARQDKDEVQHQISILLFIGLACGLMMMVFTRLFGSWALTAFTGAKNAEIVPAANTYVQIRGLAWPAVLIGWVAQSASLGMKDSWGPLKALAVASAINGVGDIVLCTFLGYGIAGAAWATMVSQVVAAYMMMDALN-----KKGYSAFSLSVPSPSELLMIFGLAAPVFITMMSKVLFYTLLVYFATSMGTSVIAAHQVMLQTYTMCTVWGEPLSQTAQSFMPELLFGINRNLPKARMLLKSLVIIGATLGIVVGTIGTAIPWMFPSIFTHDKAVTFQMHTVIIPYF-LALFATPSTHSLEGTLLAGRDLRYISLTMTGCFAVAGLAVML----LSNGGFGLRGCWYALVGFQWARFSLALIRLLSRDGVLYSEDTSRYAEKV 551          
BLAST of EWM21589.1 vs. NCBI_GenBank
Match: gi|1072978035|ref|XP_018439374.1| (PREDICTED: protein DETOXIFICATION 46, chloroplastic [Raphanus sativus])

HSP 1 Score: 260.381 bits (664), Expect = 2.313e-75
Identity = 174/450 (38.67%), Postives = 258/450 (57.33%), Query Frame = 0
Query:  154 LAALLRFTIPTLGIWLAGPIMSLVDTSVVGLSSDLELAGMGPATNLCDSFIYLFTFLAVATTNLLAGALADGDEAKSQTVVSHALAIALGAGILVMLVIEFAGKRMLAATIGADGPLLIPVALKYTNIRALGAPFVLVGMVAQSSLLGAKDSVTPLLVTLGAGAINLILDMTLVSFGKCGIAGAAAATVVAEIVGTVVLLRALKRAQGPRRFYPFIALSSPLKDIAKFFTFAGPVFFALFGKSLCYTSLGIAAQMMGAVPLAAHQVMLRCFFFFTTFGDSLSTTAQAFLPGFL--VDDNKLAIGKVVRRLVSISLGVGGLNAMLAGLLPSFFPGLFTTSAAIVGQMH-LIAPWLSLCLLAHACTMALEGTLLAERELRFLASS----YAINTLLVLVGLRRLQHVAAGIQGVWACLLYFQVSRCIIFALRLLSKHGLL--QRARRRASRM 594
            +  ++ FT P  G+WL GP+MSL+DT+V+G  S LELA +GPAT +CD   Y F FL+VAT+NL+A +LA  D+ + Q  +S  L I L  G+++M+     G   L A  GA    ++P A  Y  IR L  P VL+G VAQS+ LG KDS  PL     A AIN + D+ L +F   GIAGAA AT+V+++V   +++ AL + +G   F   I++ SP  ++   F  A PVF  +  K L YT L   A  MG   +AAHQVML+ +   T +G+ LS TAQ+F+P  L  ++ N      +++ LV I   +G +   +   +P  FP +FT    +  QMH +I P+  L L     T +LEGTLLA R+LR+++ S    +A+  L+V++    L +   G++G W  L+ FQ +R  +  +RLLS+ G+L  +   R A ++
Sbjct:  110 MKEIVMFTGPAAGLWLCGPLMSLIDTAVIGQGSSLELAALGPATVVCDYLCYTFMFLSVATSNLVATSLARQDKDEVQHQISILLFIGLSCGLMMMVFTRLFGSWALTAFTGAKNAEIVPAANTYVQIRGLAWPAVLIGWVAQSASLGMKDSWGPLKALAVASAINGVGDVVLCTFLGYGIAGAAWATMVSQVVAAYMMMDALNK-KGYSAFS--ISVPSP-SELLMIFGLAAPVFITMMSKVLFYTLLVYFAASMGTSVIAAHQVMLQTYTMCTVWGEPLSQTAQSFMPELLFGINRNLPKARMLLKSLVIIGATLGIVVGTIGTAIPWLFPSIFTHDKLVTFQMHTVIIPYF-LALFVTPSTHSLEGTLLAGRDLRYISLSMTGCFAVAGLVVML----LSNGGFGLRGCWYALVGFQWARFSLALMRLLSRDGVLYSEDTSRYAEKV 550          
The following BLAST results are available for this feature:
BLAST of EWM21589.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585101844|gb|EWM21589.1|0.000e+0100.00dna-damage-inducible protein [Nannochloropsis gadi... [more]
gi|298715211|emb|CBJ27883.1|4.146e-9546.31conserved unknown protein [Ectocarpus siliculosus][more]
gi|567190178|ref|XP_006404573.1|1.584e-7835.62hypothetical protein EUTSA_v10000106mg [Eutrema sa... [more]
gi|922543846|ref|XP_013599694.1|6.192e-7738.80PREDICTED: LOW QUALITY PROTEIN: MATE efflux family... [more]
gi|674951838|emb|CDX82020.1|1.012e-7638.80BnaC08g35810D [Brassica napus][more]
gi|255543827|ref|XP_002512976.1|3.415e-7637.05PREDICTED: protein DETOXIFICATION 46, chloroplasti... [more]
gi|923705761|ref|XP_013660970.1|6.324e-7638.58PREDICTED: MATE efflux family protein 4, chloropla... [more]
gi|685366787|ref|XP_009117414.1|6.923e-7638.58PREDICTED: LOW QUALITY PROTEIN: protein DETOXIFICA... [more]
gi|923718557|ref|XP_013664324.1|7.098e-7638.58PREDICTED: MATE efflux family protein 4, chloropla... [more]
gi|1072978035|ref|XP_018439374.1|2.313e-7538.67PREDICTED: protein DETOXIFICATION 46, chloroplasti... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9073rna9073Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications