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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100012g24.1920.mrna |
| Orig protein id | gnl|cribi|Naga_100012g24.1920 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037251.1 | supercontig | KK037251.1:271639..272860 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna9072 ID=rna9072|Name=rna9072|organism=Nannochloropsis gaditana|type=mRNA|length=1565bp
ACGGGGAGTAGACAGTGAAAGGATGAAAACGGCAGGCGGGCACCTGTGTT
TTGTTGCTATGACATATATCAAGACTTTGCGCAATTGCTGGCTCTTTCAT
AGGTCCATACGACAGGAAAGAGATTTACTCGGGGGTGCGTGAACCTCGCA
ACTTGCGGCACACTCTTCTTTCCTCTTCCTTCTTTGCTGAGTGTTTTGAG
CCATTACTATCTCTTTTTCAATGCAACAGGGGCATTCATGGTGGCTTCGT
CATATCCTCATCCCTCTGTAACCGATGATACGGCATGCGCTCTGACTGCG
ATCGAGGAGGAGCGTCTCGCGAACATAAAGAAGAACCATGCCGTCCTCGT
CTCTGTGGGCCTAGCTTCCCATGGCCTCGCTGCATCTCGTCCGAAAAATA
ACTTCAGCAGCCTAAAAGGTGTGCATAGGCTCAAACGCCCTCCAAAACCA
CCTACCCTGCCAACACGGCGATCCATTCGCAACTTAGGTCGGGACGCGCC
CGATTACAAAGAAGATAGTATTTCGTATGCCTTGACATCGTCTCCTCCAG
CTTTTACCGTGGGTCCTCGTCATAAATGGAATGCAGAGGAGGATGCCGCG
TTTTCCGATAAGGCTTGGGATGCACCGTCCAAGGCAGTATTGGCAAGCAC
TCCCACAGGGCGTACAACAACTCCTGGAAGCTCACGCACCCGGACGGCGG
ATGTTTCTCGCCTTGCGGAGTACTTGGGAAAGCCGGTACCTTATACCGGA
AAACAATGCGTCATGGACTTGATAAGTCCAGCAAATGAAGATGGACAAGG
CCCCGTGAAGTTTAGTAAATATGCTGGGGTTGTGGAATGGCGAAATTGCG
TGGTTTTGTGGGTGAACGCCGACGGGCATGACTACGAAAACTTGTTTCTG
GGGGAGGGACGACAGATGACATGGTTTGCGGGTAGCCGCGTTACTGCCGA
AACGCCGGTTATGCTCCGGCTGCTAGCGGCGGGGAGGATGATTAAGGAAG
AGGAGCGAAAAACGAGAGAAGGTGAAATTATACAAAGCAGGGGGGCGGGG
TCGGAGCCTGCAGAGATTCGAGAAGAGGGGGGGGGGCAGGAGGACATATT
GTTGTTTTGCAGGCGACAGGGGGAGCCATACGTATTCATGGGCAGGATAT
GGTACGTTTGGTGCGAGGTGAATCGGCATCCGATCAAAGTGTTGTGGGAG
CTGCGGGACTTCGAGGCAATCCGAGACAGCCCCCACGTGCGGGAGGTGAT
GGGAGGCGTAGATGTGGAAAAGGAAGGGGAGGCGGCGGGTCGGGTCAATG
GGCCGTGTGGTGGAGAGAAAGAGAAAGATGGGGGCGGGACAGAGGAGGGG
AAAGGGAGCGAAGGGCAGGGCATGGGGCGTCGAGGCAAGCGAGCCCGGGC
GAAGTGATGGAAAGGGCCTTTTTGAACGGATAGAGGCGCGAAATAAAGCA
TATGTACAAACGTGCAGAGGACAATGTGATTTTCAATTCCCCCGGAGGGG
TTTCATGTCTCTTGTGTGAGAAGCCTTATGTTCCTGTCCTCCCTGTTGGG
CTACCTCGAACGCTC back to topprotein sequence of rna9072 >rna9072-protein ID=rna9072-protein|Name=rna9072|organism=Nannochloropsis gaditana|type=polypeptide|length=311bp
MLIRPLLPLFHLLLPPVLLAFHPQPPSPSPPPFPPASPQPPLTSSRRDFL
SSVSIIPSFLCFLFEAPRPSHASSAREAVAKAASKLPGYGAPDTLYPSFF
AGDWMVTREVVGLVVPPEEVGKVSPEDLAQATAQQGEKLKYLVRFLPYEA
DGRSPRSEASVEGQISTTLVIADRGFNEEQLWKARLAKAGKSELYQEGVS
SRWDRGNPNVLTVSFPDGTVREIKVTKRSFENSAVDAFGSSEYCRVADAA
ADTGIASVPRLSALRVLRRFKRVGEDIEGLELVKYYPTVSFSADPPSIMT
VKARIKMERSR back to topmRNA from alignment at KK037251.1:271639..272860- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna9072 ID=rna9072|Name=rna9072|organism=Nannochloropsis gaditana|type=mRNA|length=1222bp|location=Sequence derived from alignment at KK037251.1:271639..272860- (Nannochloropsis gaditana)
ATTGAAGGAGTTGTGAATGCGTTAGCTCTCAGACTTGAGGGTAGAAAGTG
AGGGGAATATGGGATTCCTTCAGGCTTGCTCGTGACGGGCTTGGACACCT
ATTGCCTGGACCGTCTTATTCCTAATCCTTGACGCTCTTTTTCCCCTAAG
CATCCCACCTGTAGAGCGGAAATTCAGTTAAACCCCTAAAGGCATGCTTA
TCAGACCACTTCTTCCCCTTTTCCATCTTCTGCTCCCTCCCGTCCTCCTT
GCTTTCCACCCGCAACCCCCATCGCCTTCCCCCCCGCCCTTCCCTCCTGC
AAGTCCTCAGCCCCCTTTGACATCCAGCCGCCGCGACTTCCTTTCTAGTG
TGAGCATTATTCCCTCATTCCTGTGCTTTCTTTTTGAGGCTCCACGGCCG
TCCCATGCCTCGAGCGCTCGCGAAGCTGTTGCCAAAGCGGCAAGTAAGCT
TCCCGGTTACGGCGCACCTGACACATTGTATCCCTCGTTTTTCGCGGGTG
ATTGGATGGTAACCAGGGAGGTAGTAGGCCTTGTGGTACCCCCAGAGGAA
GTCGGCAAGGTATCTCCCGAGGATCTGGCGCAAGCGACGGCGCAACAGGG
TGAAAAGCTGAAGTATCTGGTGCGGTTCCTGCCGTACGAGGCAGATGGAA
GGAGCCCGCGAAGCGAGGCCTCAGTGGAGGGACAGATATCTACGACACTG
GTAATAGCAGATCGAGGATTCAACGAGGAACAACTGTGGAAGGCCCGCCT
TGCGAAAGCGGGAAAAAGCGAGCTGTACCAAGAAGGGGTCTCGAGCCGTT
GGGACCGTGGCAACCCCAACGTCCTTACTGTCTCCTTCCCCGACGGAACG
GTTCGGGAGATCAAAGTCACAAAACGGTCCTTTGAAAATTCGGCGGTGGA
CGCCTTCGGTTCCTCAGAGTATTGCCGAGTGGCGGACGCGGCCGCCGACA
CCGGGATCGCCTCTGTTCCCCGCCTCAGTGCTTTGCGGGTCTTGCGCCGG
TTCAAGCGGGTAGGGGAAGACATCGAAGGACTGGAGCTGGTCAAATACTA
CCCCACGGTGAGCTTTAGTGCCGACCCGCCATCGATCATGACGGTGAAGG
CGCGAATAAAGATGGAGCGTTCGAGGTAGCCCAACAGGGAGGACAGGAAC
ATAAGGCTTCTCACACAAGAGACATGAAACCCCTCCGGGGGAATTGAAAA
TCACATTGTCCTCTGCACGTTT back to topCoding sequence (CDS) from alignment at KK037251.1:271639..272860- >rna9072 ID=rna9072|Name=rna9072|organism=Nannochloropsis gaditana|type=CDS|length=936bp|location=Sequence derived from alignment at KK037251.1:271639..272860- (Nannochloropsis gaditana)
ATGCTTATCAGACCACTTCTTCCCCTTTTCCATCTTCTGCTCCCTCCCGT
CCTCCTTGCTTTCCACCCGCAACCCCCATCGCCTTCCCCCCCGCCCTTCC
CTCCTGCAAGTCCTCAGCCCCCTTTGACATCCAGCCGCCGCGACTTCCTT
TCTAGTGTGAGCATTATTCCCTCATTCCTGTGCTTTCTTTTTGAGGCTCC
ACGGCCGTCCCATGCCTCGAGCGCTCGCGAAGCTGTTGCCAAAGCGGCAA
GTAAGCTTCCCGGTTACGGCGCACCTGACACATTGTATCCCTCGTTTTTC
GCGGGTGATTGGATGGTAACCAGGGAGGTAGTAGGCCTTGTGGTACCCCC
AGAGGAAGTCGGCAAGGTATCTCCCGAGGATCTGGCGCAAGCGACGGCGC
AACAGGGTGAAAAGCTGAAGTATCTGGTGCGGTTCCTGCCGTACGAGGCA
GATGGAAGGAGCCCGCGAAGCGAGGCCTCAGTGGAGGGACAGATATCTAC
GACACTGGTAATAGCAGATCGAGGATTCAACGAGGAACAACTGTGGAAGG
CCCGCCTTGCGAAAGCGGGAAAAAGCGAGCTGTACCAAGAAGGGGTCTCG
AGCCGTTGGGACCGTGGCAACCCCAACGTCCTTACTGTCTCCTTCCCCGA
CGGAACGGTTCGGGAGATCAAAGTCACAAAACGGTCCTTTGAAAATTCGG
CGGTGGACGCCTTCGGTTCCTCAGAGTATTGCCGAGTGGCGGACGCGGCC
GCCGACACCGGGATCGCCTCTGTTCCCCGCCTCAGTGCTTTGCGGGTCTT
GCGCCGGTTCAAGCGGGTAGGGGAAGACATCGAAGGACTGGAGCTGGTCA
AATACTACCCCACGGTGAGCTTTAGTGCCGACCCGCCATCGATCATGACG
GTGAAGGCGCGAATAAAGATGGAGCGTTCGAGGTAG back to top
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