EWM21588.1, cds9042 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM21588.1 vs. NCBI_GenBank
Match: gi|585101843|gb|EWM21588.1| (hypothetical protein Naga_100012g24 [Nannochloropsis gaditana]) HSP 1 Score: 622.854 bits (1605), Expect = 0.000e+0 Identity = 311/311 (100.00%), Postives = 311/311 (100.00%), Query Frame = 0
Query: 1 MLIRPLLPLFHLLLPPVLLAFHPQPPSPSPPPFPPASPQPPLTSSRRDFLSSVSIIPSFLCFLFEAPRPSHASSAREAVAKAASKLPGYGAPDTLYPSFFAGDWMVTREVVGLVVPPEEVGKVSPEDLAQATAQQGEKLKYLVRFLPYEADGRSPRSEASVEGQISTTLVIADRGFNEEQLWKARLAKAGKSELYQEGVSSRWDRGNPNVLTVSFPDGTVREIKVTKRSFENSAVDAFGSSEYCRVADAAADTGIASVPRLSALRVLRRFKRVGEDIEGLELVKYYPTVSFSADPPSIMTVKARIKMERSR 311
MLIRPLLPLFHLLLPPVLLAFHPQPPSPSPPPFPPASPQPPLTSSRRDFLSSVSIIPSFLCFLFEAPRPSHASSAREAVAKAASKLPGYGAPDTLYPSFFAGDWMVTREVVGLVVPPEEVGKVSPEDLAQATAQQGEKLKYLVRFLPYEADGRSPRSEASVEGQISTTLVIADRGFNEEQLWKARLAKAGKSELYQEGVSSRWDRGNPNVLTVSFPDGTVREIKVTKRSFENSAVDAFGSSEYCRVADAAADTGIASVPRLSALRVLRRFKRVGEDIEGLELVKYYPTVSFSADPPSIMTVKARIKMERSR
Sbjct: 1 MLIRPLLPLFHLLLPPVLLAFHPQPPSPSPPPFPPASPQPPLTSSRRDFLSSVSIIPSFLCFLFEAPRPSHASSAREAVAKAASKLPGYGAPDTLYPSFFAGDWMVTREVVGLVVPPEEVGKVSPEDLAQATAQQGEKLKYLVRFLPYEADGRSPRSEASVEGQISTTLVIADRGFNEEQLWKARLAKAGKSELYQEGVSSRWDRGNPNVLTVSFPDGTVREIKVTKRSFENSAVDAFGSSEYCRVADAAADTGIASVPRLSALRVLRRFKRVGEDIEGLELVKYYPTVSFSADPPSIMTVKARIKMERSR 311
BLAST of EWM21588.1 vs. NCBI_GenBank
Match: gi|873226140|emb|CEM21975.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 127.102 bits (318), Expect = 3.239e-31 Identity = 88/248 (35.48%), Postives = 122/248 (49.19%), Query Frame = 0
Query: 70 SHASSAREAVAKAASKLPGYGAPDTLYPSFFAGDWMVTREVVGLVVPPEEVGKVSPEDL-AQATAQQGEKLKYLVRFLPYEADGRSPRSEASVEGQISTTLVIADRGF---NEEQLWKARLAKAGKSEL---YQEGVSSRWDRGNPNVLTVSFPDGTVREIKVTKRSFENSAVDAFGSSEYCRVADAAADTGIASVPRLSALRVLRRFKRVGE-DIEGLELVKYYPTVSFSADPPSIMTVKARIKMER 309
S A E + KAAS LPG G PD YP+ + G W RE V V PE KV P L + A + + VR++ + V+ DR F N E + + G L G +RW NPN+LT+ P GT+RE+KVTKR+FE + D FG SEY R+AD + + VP L A R+ R++RV IEGLEL + +P S + DP ++ +K ++ M+R
Sbjct: 34 SQAEGISEGIRKAASGLPGLGPPDVYYPASWLGKWE-RRESVVSVTAPEGPSKVDPPHLLSDAEKLLNRTIVFPVRYIERGSG------------------VVMDRAFVWGNTESARRYCIESGGGGVLPIGEVSGYPTRWSESNPNILTIDMPGGTIREMKVTKRAFEQPSDDTFGFSEYMRIADTSRALTV-EVPTLFAARLQGRYRRVSSLRIEGLELWQVFPPTSIAPDPQPVLVIKRQVAMQR 261
BLAST of EWM21588.1 vs. NCBI_GenBank
Match: gi|922858892|gb|KOO26972.1| (hypothetical protein Ctob_004877 [Chrysochromulina sp. CCMP291]) HSP 1 Score: 117.472 bits (293), Expect = 2.692e-27 Identity = 100/269 (37.17%), Postives = 141/269 (52.42%), Query Frame = 0
Query: 67 PRPSHA----SSAREAVAKAASKLPGYGAPDTLYPSFFAGDWMVTREVVGLVVPPEEVGKVSPEDLAQATAQQ---GEK-LKYLVRFLPYEADGRSPRSEASVEGQISTTL---------VIADRGFNEEQLWKARLAKAGKSELYQEGVSSRWDRGNPNVLTVSFPDGTVREIKVTKRSFENSAVDAFGSSEYCRVADAAADTGIASVPRLSALRVLRRFKRVGED---IEGLELVKYY-PTVSFSADPPS---IMTVKARIKMERSR 311
P +HA S+ E + KAAS +PGYG PD YP F G W V +V + P E V+P D + TA+Q E+ L + RF+ EA+G + + E S L VIADR FN E A+ G + L + ++RW+ NPNVLT++ GTV E KVTKRSF+ AFG+SEY R+ADA ++ + VP + A RV ++K G + IE +EL + + PT + AD ++T KAR+ R +
Sbjct: 31 PDAAHAAVKFSNGAEEIRKAASLIPGYGPPDISYPPVFLGRWRVESRMVNVTTPLGE--DVAPMDQLK-TARQLMAAERPLSFEQRFV--EAEGGASGVVLARENSDSLALSLKNYGGGMVIADRAFNAEH---RAAAQPGAAPL--QDFTARWEPTNPNVLTLA-SRGTVVETKVTKRSFQQPFDGAFGTSEYVRIADAGSEGVLGGVPNIKASRVQIKYKWDGANPSVIEAIELAQVFDPTQTGFADLAGATPVLTTKARLLFTRQK 288
BLAST of EWM21588.1 vs. NCBI_GenBank
Match: gi|551665033|ref|XP_005835279.1| (hypothetical protein GUITHDRAFT_105906 [Guillardia theta CCMP2712] >gi|428179428|gb|EKX48299.1| hypothetical protein GUITHDRAFT_105906 [Guillardia theta CCMP2712]) HSP 1 Score: 104.375 bits (259), Expect = 1.190e-22 Identity = 78/217 (35.94%), Postives = 109/217 (50.23%), Query Frame = 0
Query: 77 EAVAKAASKLPGYGAPDTLYPSFFAGDWMVTREVVGLVVPPEEVGKVSPEDLAQATAQQGEKL-KYLVRFLPYEADGRSPRSEASVEGQISTTLVIADRGFNEEQLWKARLAKAGKSELYQEGVSSRWDRGNPNVLTVSFPDGTVREIKVTKRSFENSAVDAFGS----SEYCRVA---DAAADTGIASVPRLSALRVLRRFKRVGEDIEGLELVKY 285
E V KAASK+PG+G D YP F G W V R + G+ E + + +DL + + +K+ +Y R++P E DG IADR +N QL A K G+ +W NPNVLTVS+PDG + E KVTKRS S++ GS +E+ R+A +A + TG+A PR+SA RF+ V D L++Y
Sbjct: 59 ENVRKAASKIPGFGPKDVFYPDSFRGKWNVERTITGV----ELLAAIEDQDLYKKVLSRKDKVEQYTTRYIPKE-DG-----------------TIADREYNTRQLLAAEDEK---------GMDVQWSASNPNVLTVSYPDGRIEERKVTKRS---SSMGGDGSTAEFTEFVRIAQLQNAGSLTGVAPAPRISARWYRCRFRVVDADTVESILLEY 241
BLAST of EWM21588.1 vs. NCBI_GenBank
Match: gi|1072237271|gb|OEU21998.1| (hypothetical protein FRACYDRAFT_232149 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 97.4413 bits (241), Expect = 3.386e-20 Identity = 73/224 (32.59%), Postives = 114/224 (50.89%), Query Frame = 0
Query: 75 AREAVAKAASKLPGYGAPDTLYPSFFAGDWMVTREVVGLVVPPEEVGKVSPEDLAQATAQQGEKLKYLVRFLPYEADGRSPRSEASVEGQISTTLVIADRGFNEEQLWKA--RLAKAGKSELYQEG------------VSSRWDRGNPNVLTVSFPDGTVREIKVTKRSFENSAVDAFGSSEYCRVADAAADTGIASVPRLSALRVLRRFKRVGED-IEGLELV 283
A EAV ++A+ +PGYG D YP FAG+W +TR EV + + + +++ +L Y +RF+ RS +A V+ADRG+N+ +L A R + G+ E +E +S W + NPN L + DGT +EIKVTKR+ E + VD SSE+ R+ +P +SA R++ ++K+V E +EG+E+V
Sbjct: 37 AGEAVRRSAANIPGYGKQDVFYPELFAGNWKMTR----------EVEFNNNNNPSSSSSSSVLRLMYPIRFI------RSIEDDA----------VVADRGYNQAELETALVRTVQRGRKEDGEESSSTTAPSTNSPKISYEWVQSNPNDLRLVLSDGTKKEIKVTKRATERT-VDTVSSSEFQRITQEER----GGIPLISARRIVSKWKQVDESTLEGIEIV 229
BLAST of EWM21588.1 vs. NCBI_GenBank
Match: gi|551558604|ref|XP_005766277.1| (hypothetical protein EMIHUDRAFT_451917 [Emiliania huxleyi CCMP1516] >gi|485616518|gb|EOD13848.1| hypothetical protein EMIHUDRAFT_451917 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 93.9745 bits (232), Expect = 6.197e-19 Identity = 87/245 (35.51%), Postives = 119/245 (48.57%), Query Frame = 0
Query: 77 EAVAKAASKLPGYGAPDTLYPSFFAGDWMVTREVVGLVVPPEEVGKVSPEDLAQA-TAQQGEKLKYLVRFLPYEADGRSPRSEASVEGQISTTLVIADRGFNEEQLWKARLAKAGKSELYQEGVSSRWDRGNPNVLTVSFPDGTVREIKVTKRSFENSAVDAFGSSEYCRVADAAADTGIASVPRLSALRVLRRFKR--VGE-----DIEGLELVKYY-PTVSFSADPPS---IMTVKARIKMER 309
E V KAAS LPGYG PD +P F G W VTR+VV + P E E L QA + + + RF+ Q S VIADR FN E+ R A + L + +RW+ NPNVLT++ + + TK F+ AFG+SEY R+ADA + ++SVP + A RV ++K GE IEGLE+ + PT + AD ++ KAR++ ER
Sbjct: 30 EEVRKAASLLPGYGPPDIAFPPPFRGRWRVTRQVVDVQTPLGETA-APREALRQARDSLVAPPVTFEQRFV-----------------QDSERAVIADRSFNAER----RTAAISGTALAD--LEARWEPSNPNVLTLA--RVSTSSLVETKAPFDG----AFGTSEYARIADAGSSGVLSSVPTILAARVQAKYKWEPAGEPGAVARIEGLEITSTFDPTQTGFADLSGATPVLVTKARLRFER 244
BLAST of EWM21588.1 vs. NCBI_GenBank
Match: gi|397625348|gb|EJK67758.1| (hypothetical protein THAOC_11171 [Thalassiosira oceanica]) HSP 1 Score: 90.1225 bits (222), Expect = 2.251e-16 Identity = 78/224 (34.82%), Postives = 109/224 (48.66%), Query Frame = 0
Query: 72 ASSAREAVAKAASK-LPGYGAPDTLYPSFFAGDWMVTREVVGLVVPPEEVGKVSPEDLAQATAQQGEKLKYLVRFLPYEADGRSPRSEASVEGQISTTLVIADRGFNEEQLWKARLAKAGKSELYQEGV-----SSRWDRGNPNVLTVSFPDGTVREIKVTKRSFENSAVDAFG--SSEYCRVADA-AADTGIASVPRLSALRVLRRFK---RVGEDIEGLELV 283
A + EA+ +SK LPG G PD YP +FAG W VTR V+ + + DL + + RF+PY A + + Q + IADR FNE+ L A + K +E V S W NPNVL++S+ DG +E+KVTKRS + S D G SSE+ R+ D AA G+ +P + RVL ++K IEG+E+
Sbjct: 400 AETPSEAIRLLSSKTLPGLGPPDVYYPPYFAGRWKVTR-----VISSSD--DLPWTDLKDNGVELPISISCEARFVPYNAG----KDFTDFDNQSNDIPAIADRSFNEKALNSALAEEISKLFSTKEPVIPTVRSIDWTATNPNVLSISYADGASKEVKVTKRSSDVSG-DGNGVFSSEFRRITDVPAASNGVGGIPSILKSRVLTKWKPGNSSKTAIEGIEIT 611
BLAST of EWM21588.1 vs. NCBI_GenBank
Match: gi|224000539|ref|XP_002289942.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220975150|gb|EED93479.1| predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 82.4185 bits (202), Expect = 1.269e-14 Identity = 78/230 (33.91%), Postives = 114/230 (49.57%), Query Frame = 0
Query: 70 SHASSAREAVAKAASK-LPGYGAPDTLYPSFFAGDWMVTREVVGLVVPPEEVGKVSPEDLAQATAQQGEKLKYLVRFLPYEADGRSPRSEASVEGQISTTLVIADRGFNEEQLWKARLAKAGKSELYQEGVSS----RWDRGNPNVLTVSFPDGTVREIKVTKRSFENS-AVDAFGSSEYCRVADAAADTGIA-SVPRLSALRVLRRFKRVGED----------IEGLEL 282
S A + EA+ +SK LPG G PD YP +F G W VTR V + ED K++ +RF+PY+A G+ + + S IADR FNE + A LA S + + S W NPNVL++S+ DG+ +E+KVTKRS + S + D+ SSE+ R+ A G+A +P + RVL ++K+ G D +EG+E+
Sbjct: 9 SAAETPAEAIRILSSKTLPGLGPPDVYYPPYFVGKWKVTRLVT------------TSEDSFYKDVPLPLKVESEMRFVPYDA-GKDFENFSGDNANDSP--AIADRAFNERSFYNA-LASVLFSGPVPKSLPSINKLDWTPTNPNVLSMSYADGSSKEVKVTKRSSDVSKSGDSVFSSEFRRITAVPAAGGVAGGIPSIYKSRVLTKWKQ-GADGTGFIGKVNLVEGIEI 221
BLAST of EWM21588.1 vs. NCBI_GenBank
Match: gi|219116783|ref|XP_002179186.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217409077|gb|EEC49009.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 73.559 bits (179), Expect = 3.380e-11 Identity = 83/270 (30.74%), Postives = 120/270 (44.44%), Query Frame = 0
Query: 77 EAVAKAASKLPGYGAPDTLYPSFFAGDWMVTREVVGLVVPPEEVGKVSPEDLAQATAQQGEKLKYLVRFLPYEADGRSPRSEASVEGQISTTLVIADRGFNEEQLWKA-RLAKAGKSELYQEGVSSR------WDRGNPNVLTVSFPD----GTVREIKVTKRSFENSAVD----AFGSSEYCRVADAAADTGIASVPRLSALRVLRRF-----KRVGEDIEGLELV----------------KYYPTVSFSADPPSIMTVKARIKMERS 310
EA + A+ PGYG D YP+ G WM+ REV L + + L Y VRFL S + EA V+ADRGFN+ L +A R ++ +E ++ + +R W NPN L ++ P G +EIK TKRS E + +D A SSE+ RV DT +P +SA RVL ++ + G EGLE+V TVS S+ P ++ K+R+++ER+
Sbjct: 94 EAFRRGAANFPGYGPSDVFYPATLQGVWMLRREVT-LYTNGDATTLI---------------LSYPVRFLT------SVQPEA----------VVADRGFNQVSLERALRDRRSNVTE--RDTIETRVPIAYEWSVNNPNDLRITIPTDQEGGGRKEIKTTKRSTEYNNLDGDAVAVTSSEFQRV--TVEDT--RGIPSISARRVLTKWIINQNEENGNVAEGLEIVYDMSSSGGLAGDPMAFSTAKTVSSSSKP--MILSKSRLRLERA 323
BLAST of EWM21588.1 vs. NCBI_GenBank
Match: gi|1026761432|gb|OAE22911.1| (hypothetical protein AXG93_2777s1030 [Marchantia polymorpha subsp. ruderalis]) HSP 1 Score: 67.3958 bits (163), Expect = 5.008e-9 Identity = 80/288 (27.78%), Postives = 116/288 (40.28%), Query Frame = 0
Query: 43 TSSRRDFLSSVSIIPSFLCFLFEAPRPSHASSAREA-VAKAASKLPGYGAPDTLYPSFFAGDWMVTREVVGLVVPPEEVGKVSPEDLAQATAQQGEKLKYLVRFLPYEADGRSPRSEASVEGQISTTLVIADRGFNEEQLWKARLAKAGKSELYQEGVSSRWDRGNPNVLTVSFPDGTVREIKVTKRSFENSAVDAFGSSEYCR-VADAAA-------------------DTGIASVPRLSALRVLRRFKRVGEDIEGLELVKYYPTVSFSADPPSIMTVKARIKMER 309
T +RR F ++P F L E P + A+ A + + G G PD YP+FF G W ++ + P E K + + Q G + Y VRF P+E GR VI DR F L +A + K + +EG +W PN L + GT E VTKRS E VD F +SE+ + V D +A DT V ++ A++ + F +EG+E+ F+ P + K RI+ ER
Sbjct: 95 TVNRRFF----CMVPVFATALHEYPASASVLLAQTAPYSNMLLRSLGIGDPDIYYPAFFEGTWNCYSTLIQVTTPQGE-DKADRRSVEFSRKQLGYAVPYQVRFTPFE--GR----------------VICDRLFTTTSLVEATVGK----NVIEEG---QWSPQQPNRLVLLLKGGTKVENLVTKRSAEYFQVDQFDTSEFSKQVFDNSAIKDGPPTVKASLNLTRYHWDTAAPVVTKMEAIQKVSIF---AVPMEGMEM--------FNTTTP-VTVYKYRIEFER 340 The following BLAST results are available for this feature:
BLAST of EWM21588.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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