EWM21588.1, cds9042 (CDS) Nannochloropsis gaditana

Overview
NameEWM21588.1
Unique Namecds9042
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037251.1:271732..272667 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM21588.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100012g24.1920.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037251.1supercontigKK037251.1:271732..272667 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
BLAST of EWM21588.1 vs. NCBI_GenBank
Match: gi|585101843|gb|EWM21588.1| (hypothetical protein Naga_100012g24 [Nannochloropsis gaditana])

HSP 1 Score: 622.854 bits (1605), Expect = 0.000e+0
Identity = 311/311 (100.00%), Postives = 311/311 (100.00%), Query Frame = 0
Query:    1 MLIRPLLPLFHLLLPPVLLAFHPQPPSPSPPPFPPASPQPPLTSSRRDFLSSVSIIPSFLCFLFEAPRPSHASSAREAVAKAASKLPGYGAPDTLYPSFFAGDWMVTREVVGLVVPPEEVGKVSPEDLAQATAQQGEKLKYLVRFLPYEADGRSPRSEASVEGQISTTLVIADRGFNEEQLWKARLAKAGKSELYQEGVSSRWDRGNPNVLTVSFPDGTVREIKVTKRSFENSAVDAFGSSEYCRVADAAADTGIASVPRLSALRVLRRFKRVGEDIEGLELVKYYPTVSFSADPPSIMTVKARIKMERSR 311
            MLIRPLLPLFHLLLPPVLLAFHPQPPSPSPPPFPPASPQPPLTSSRRDFLSSVSIIPSFLCFLFEAPRPSHASSAREAVAKAASKLPGYGAPDTLYPSFFAGDWMVTREVVGLVVPPEEVGKVSPEDLAQATAQQGEKLKYLVRFLPYEADGRSPRSEASVEGQISTTLVIADRGFNEEQLWKARLAKAGKSELYQEGVSSRWDRGNPNVLTVSFPDGTVREIKVTKRSFENSAVDAFGSSEYCRVADAAADTGIASVPRLSALRVLRRFKRVGEDIEGLELVKYYPTVSFSADPPSIMTVKARIKMERSR
Sbjct:    1 MLIRPLLPLFHLLLPPVLLAFHPQPPSPSPPPFPPASPQPPLTSSRRDFLSSVSIIPSFLCFLFEAPRPSHASSAREAVAKAASKLPGYGAPDTLYPSFFAGDWMVTREVVGLVVPPEEVGKVSPEDLAQATAQQGEKLKYLVRFLPYEADGRSPRSEASVEGQISTTLVIADRGFNEEQLWKARLAKAGKSELYQEGVSSRWDRGNPNVLTVSFPDGTVREIKVTKRSFENSAVDAFGSSEYCRVADAAADTGIASVPRLSALRVLRRFKRVGEDIEGLELVKYYPTVSFSADPPSIMTVKARIKMERSR 311          
BLAST of EWM21588.1 vs. NCBI_GenBank
Match: gi|873226140|emb|CEM21975.1| (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 127.102 bits (318), Expect = 3.239e-31
Identity = 88/248 (35.48%), Postives = 122/248 (49.19%), Query Frame = 0
Query:   70 SHASSAREAVAKAASKLPGYGAPDTLYPSFFAGDWMVTREVVGLVVPPEEVGKVSPEDL-AQATAQQGEKLKYLVRFLPYEADGRSPRSEASVEGQISTTLVIADRGF---NEEQLWKARLAKAGKSEL---YQEGVSSRWDRGNPNVLTVSFPDGTVREIKVTKRSFENSAVDAFGSSEYCRVADAAADTGIASVPRLSALRVLRRFKRVGE-DIEGLELVKYYPTVSFSADPPSIMTVKARIKMER 309
            S A    E + KAAS LPG G PD  YP+ + G W   RE V  V  PE   KV P  L + A       + + VR++   +                   V+ DR F   N E   +  +   G   L      G  +RW   NPN+LT+  P GT+RE+KVTKR+FE  + D FG SEY R+AD +    +  VP L A R+  R++RV    IEGLEL + +P  S + DP  ++ +K ++ M+R
Sbjct:   34 SQAEGISEGIRKAASGLPGLGPPDVYYPASWLGKWE-RRESVVSVTAPEGPSKVDPPHLLSDAEKLLNRTIVFPVRYIERGSG------------------VVMDRAFVWGNTESARRYCIESGGGGVLPIGEVSGYPTRWSESNPNILTIDMPGGTIREMKVTKRAFEQPSDDTFGFSEYMRIADTSRALTV-EVPTLFAARLQGRYRRVSSLRIEGLELWQVFPPTSIAPDPQPVLVIKRQVAMQR 261          
BLAST of EWM21588.1 vs. NCBI_GenBank
Match: gi|922858892|gb|KOO26972.1| (hypothetical protein Ctob_004877 [Chrysochromulina sp. CCMP291])

HSP 1 Score: 117.472 bits (293), Expect = 2.692e-27
Identity = 100/269 (37.17%), Postives = 141/269 (52.42%), Query Frame = 0
Query:   67 PRPSHA----SSAREAVAKAASKLPGYGAPDTLYPSFFAGDWMVTREVVGLVVPPEEVGKVSPEDLAQATAQQ---GEK-LKYLVRFLPYEADGRSPRSEASVEGQISTTL---------VIADRGFNEEQLWKARLAKAGKSELYQEGVSSRWDRGNPNVLTVSFPDGTVREIKVTKRSFENSAVDAFGSSEYCRVADAAADTGIASVPRLSALRVLRRFKRVGED---IEGLELVKYY-PTVSFSADPPS---IMTVKARIKMERSR 311
            P  +HA    S+  E + KAAS +PGYG PD  YP  F G W V   +V +  P  E   V+P D  + TA+Q    E+ L +  RF+  EA+G +     + E   S  L         VIADR FN E       A+ G + L  +  ++RW+  NPNVLT++   GTV E KVTKRSF+     AFG+SEY R+ADA ++  +  VP + A RV  ++K  G +   IE +EL + + PT +  AD      ++T KAR+   R +
Sbjct:   31 PDAAHAAVKFSNGAEEIRKAASLIPGYGPPDISYPPVFLGRWRVESRMVNVTTPLGE--DVAPMDQLK-TARQLMAAERPLSFEQRFV--EAEGGASGVVLARENSDSLALSLKNYGGGMVIADRAFNAEH---RAAAQPGAAPL--QDFTARWEPTNPNVLTLA-SRGTVVETKVTKRSFQQPFDGAFGTSEYVRIADAGSEGVLGGVPNIKASRVQIKYKWDGANPSVIEAIELAQVFDPTQTGFADLAGATPVLTTKARLLFTRQK 288          
BLAST of EWM21588.1 vs. NCBI_GenBank
Match: gi|551665033|ref|XP_005835279.1| (hypothetical protein GUITHDRAFT_105906 [Guillardia theta CCMP2712] >gi|428179428|gb|EKX48299.1| hypothetical protein GUITHDRAFT_105906 [Guillardia theta CCMP2712])

HSP 1 Score: 104.375 bits (259), Expect = 1.190e-22
Identity = 78/217 (35.94%), Postives = 109/217 (50.23%), Query Frame = 0
Query:   77 EAVAKAASKLPGYGAPDTLYPSFFAGDWMVTREVVGLVVPPEEVGKVSPEDLAQATAQQGEKL-KYLVRFLPYEADGRSPRSEASVEGQISTTLVIADRGFNEEQLWKARLAKAGKSELYQEGVSSRWDRGNPNVLTVSFPDGTVREIKVTKRSFENSAVDAFGS----SEYCRVA---DAAADTGIASVPRLSALRVLRRFKRVGEDIEGLELVKY 285
            E V KAASK+PG+G  D  YP  F G W V R + G+    E +  +  +DL +    + +K+ +Y  R++P E DG                  IADR +N  QL  A   K         G+  +W   NPNVLTVS+PDG + E KVTKRS   S++   GS    +E+ R+A   +A + TG+A  PR+SA     RF+ V  D     L++Y
Sbjct:   59 ENVRKAASKIPGFGPKDVFYPDSFRGKWNVERTITGV----ELLAAIEDQDLYKKVLSRKDKVEQYTTRYIPKE-DG-----------------TIADREYNTRQLLAAEDEK---------GMDVQWSASNPNVLTVSYPDGRIEERKVTKRS---SSMGGDGSTAEFTEFVRIAQLQNAGSLTGVAPAPRISARWYRCRFRVVDADTVESILLEY 241          
BLAST of EWM21588.1 vs. NCBI_GenBank
Match: gi|1072237271|gb|OEU21998.1| (hypothetical protein FRACYDRAFT_232149 [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 97.4413 bits (241), Expect = 3.386e-20
Identity = 73/224 (32.59%), Postives = 114/224 (50.89%), Query Frame = 0
Query:   75 AREAVAKAASKLPGYGAPDTLYPSFFAGDWMVTREVVGLVVPPEEVGKVSPEDLAQATAQQGEKLKYLVRFLPYEADGRSPRSEASVEGQISTTLVIADRGFNEEQLWKA--RLAKAGKSELYQEG------------VSSRWDRGNPNVLTVSFPDGTVREIKVTKRSFENSAVDAFGSSEYCRVADAAADTGIASVPRLSALRVLRRFKRVGED-IEGLELV 283
            A EAV ++A+ +PGYG  D  YP  FAG+W +TR          EV   +  + + +++    +L Y +RF+      RS   +A          V+ADRG+N+ +L  A  R  + G+ E  +E             +S  W + NPN L +   DGT +EIKVTKR+ E + VD   SSE+ R+           +P +SA R++ ++K+V E  +EG+E+V
Sbjct:   37 AGEAVRRSAANIPGYGKQDVFYPELFAGNWKMTR----------EVEFNNNNNPSSSSSSSVLRLMYPIRFI------RSIEDDA----------VVADRGYNQAELETALVRTVQRGRKEDGEESSSTTAPSTNSPKISYEWVQSNPNDLRLVLSDGTKKEIKVTKRATERT-VDTVSSSEFQRITQEER----GGIPLISARRIVSKWKQVDESTLEGIEIV 229          
BLAST of EWM21588.1 vs. NCBI_GenBank
Match: gi|551558604|ref|XP_005766277.1| (hypothetical protein EMIHUDRAFT_451917 [Emiliania huxleyi CCMP1516] >gi|485616518|gb|EOD13848.1| hypothetical protein EMIHUDRAFT_451917 [Emiliania huxleyi CCMP1516])

HSP 1 Score: 93.9745 bits (232), Expect = 6.197e-19
Identity = 87/245 (35.51%), Postives = 119/245 (48.57%), Query Frame = 0
Query:   77 EAVAKAASKLPGYGAPDTLYPSFFAGDWMVTREVVGLVVPPEEVGKVSPEDLAQA-TAQQGEKLKYLVRFLPYEADGRSPRSEASVEGQISTTLVIADRGFNEEQLWKARLAKAGKSELYQEGVSSRWDRGNPNVLTVSFPDGTVREIKVTKRSFENSAVDAFGSSEYCRVADAAADTGIASVPRLSALRVLRRFKR--VGE-----DIEGLELVKYY-PTVSFSADPPS---IMTVKARIKMER 309
            E V KAAS LPGYG PD  +P  F G W VTR+VV +  P  E      E L QA  +     + +  RF+                 Q S   VIADR FN E+    R A    + L    + +RW+  NPNVLT++    +   +  TK  F+     AFG+SEY R+ADA +   ++SVP + A RV  ++K    GE      IEGLE+   + PT +  AD      ++  KAR++ ER
Sbjct:   30 EEVRKAASLLPGYGPPDIAFPPPFRGRWRVTRQVVDVQTPLGETA-APREALRQARDSLVAPPVTFEQRFV-----------------QDSERAVIADRSFNAER----RTAAISGTALAD--LEARWEPSNPNVLTLA--RVSTSSLVETKAPFDG----AFGTSEYARIADAGSSGVLSSVPTILAARVQAKYKWEPAGEPGAVARIEGLEITSTFDPTQTGFADLSGATPVLVTKARLRFER 244          
BLAST of EWM21588.1 vs. NCBI_GenBank
Match: gi|397625348|gb|EJK67758.1| (hypothetical protein THAOC_11171 [Thalassiosira oceanica])

HSP 1 Score: 90.1225 bits (222), Expect = 2.251e-16
Identity = 78/224 (34.82%), Postives = 109/224 (48.66%), Query Frame = 0
Query:   72 ASSAREAVAKAASK-LPGYGAPDTLYPSFFAGDWMVTREVVGLVVPPEEVGKVSPEDLAQATAQQGEKLKYLVRFLPYEADGRSPRSEASVEGQISTTLVIADRGFNEEQLWKARLAKAGKSELYQEGV-----SSRWDRGNPNVLTVSFPDGTVREIKVTKRSFENSAVDAFG--SSEYCRVADA-AADTGIASVPRLSALRVLRRFK---RVGEDIEGLELV 283
            A +  EA+   +SK LPG G PD  YP +FAG W VTR     V+   +   +   DL     +    +    RF+PY A     +     + Q +    IADR FNE+ L  A   +  K    +E V     S  W   NPNVL++S+ DG  +E+KVTKRS + S  D  G  SSE+ R+ D  AA  G+  +P +   RVL ++K        IEG+E+ 
Sbjct:  400 AETPSEAIRLLSSKTLPGLGPPDVYYPPYFAGRWKVTR-----VISSSD--DLPWTDLKDNGVELPISISCEARFVPYNAG----KDFTDFDNQSNDIPAIADRSFNEKALNSALAEEISKLFSTKEPVIPTVRSIDWTATNPNVLSISYADGASKEVKVTKRSSDVSG-DGNGVFSSEFRRITDVPAASNGVGGIPSILKSRVLTKWKPGNSSKTAIEGIEIT 611          
BLAST of EWM21588.1 vs. NCBI_GenBank
Match: gi|224000539|ref|XP_002289942.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220975150|gb|EED93479.1| predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 82.4185 bits (202), Expect = 1.269e-14
Identity = 78/230 (33.91%), Postives = 114/230 (49.57%), Query Frame = 0
Query:   70 SHASSAREAVAKAASK-LPGYGAPDTLYPSFFAGDWMVTREVVGLVVPPEEVGKVSPEDLAQATAQQGEKLKYLVRFLPYEADGRSPRSEASVEGQISTTLVIADRGFNEEQLWKARLAKAGKSELYQEGVSS----RWDRGNPNVLTVSFPDGTVREIKVTKRSFENS-AVDAFGSSEYCRVADAAADTGIA-SVPRLSALRVLRRFKRVGED----------IEGLEL 282
            S A +  EA+   +SK LPG G PD  YP +F G W VTR V             + ED          K++  +RF+PY+A G+   + +      S    IADR FNE   + A LA    S    + + S     W   NPNVL++S+ DG+ +E+KVTKRS + S + D+  SSE+ R+    A  G+A  +P +   RVL ++K+ G D          +EG+E+
Sbjct:    9 SAAETPAEAIRILSSKTLPGLGPPDVYYPPYFVGKWKVTRLVT------------TSEDSFYKDVPLPLKVESEMRFVPYDA-GKDFENFSGDNANDSP--AIADRAFNERSFYNA-LASVLFSGPVPKSLPSINKLDWTPTNPNVLSMSYADGSSKEVKVTKRSSDVSKSGDSVFSSEFRRITAVPAAGGVAGGIPSIYKSRVLTKWKQ-GADGTGFIGKVNLVEGIEI 221          
BLAST of EWM21588.1 vs. NCBI_GenBank
Match: gi|219116783|ref|XP_002179186.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217409077|gb|EEC49009.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 73.559 bits (179), Expect = 3.380e-11
Identity = 83/270 (30.74%), Postives = 120/270 (44.44%), Query Frame = 0
Query:   77 EAVAKAASKLPGYGAPDTLYPSFFAGDWMVTREVVGLVVPPEEVGKVSPEDLAQATAQQGEKLKYLVRFLPYEADGRSPRSEASVEGQISTTLVIADRGFNEEQLWKA-RLAKAGKSELYQEGVSSR------WDRGNPNVLTVSFPD----GTVREIKVTKRSFENSAVD----AFGSSEYCRVADAAADTGIASVPRLSALRVLRRF-----KRVGEDIEGLELV----------------KYYPTVSFSADPPSIMTVKARIKMERS 310
            EA  + A+  PGYG  D  YP+   G WM+ REV  L    +    +               L Y VRFL       S + EA          V+ADRGFN+  L +A R  ++  +E  ++ + +R      W   NPN L ++ P     G  +EIK TKRS E + +D    A  SSE+ RV     DT    +P +SA RVL ++     +  G   EGLE+V                    TVS S+ P  ++  K+R+++ER+
Sbjct:   94 EAFRRGAANFPGYGPSDVFYPATLQGVWMLRREVT-LYTNGDATTLI---------------LSYPVRFLT------SVQPEA----------VVADRGFNQVSLERALRDRRSNVTE--RDTIETRVPIAYEWSVNNPNDLRITIPTDQEGGGRKEIKTTKRSTEYNNLDGDAVAVTSSEFQRV--TVEDT--RGIPSISARRVLTKWIINQNEENGNVAEGLEIVYDMSSSGGLAGDPMAFSTAKTVSSSSKP--MILSKSRLRLERA 323          
BLAST of EWM21588.1 vs. NCBI_GenBank
Match: gi|1026761432|gb|OAE22911.1| (hypothetical protein AXG93_2777s1030 [Marchantia polymorpha subsp. ruderalis])

HSP 1 Score: 67.3958 bits (163), Expect = 5.008e-9
Identity = 80/288 (27.78%), Postives = 116/288 (40.28%), Query Frame = 0
Query:   43 TSSRRDFLSSVSIIPSFLCFLFEAPRPSHASSAREA-VAKAASKLPGYGAPDTLYPSFFAGDWMVTREVVGLVVPPEEVGKVSPEDLAQATAQQGEKLKYLVRFLPYEADGRSPRSEASVEGQISTTLVIADRGFNEEQLWKARLAKAGKSELYQEGVSSRWDRGNPNVLTVSFPDGTVREIKVTKRSFENSAVDAFGSSEYCR-VADAAA-------------------DTGIASVPRLSALRVLRRFKRVGEDIEGLELVKYYPTVSFSADPPSIMTVKARIKMER 309
            T +RR F     ++P F   L E P  +    A+ A  +    +  G G PD  YP+FF G W     ++ +  P  E  K     +  +  Q G  + Y VRF P+E  GR                VI DR F    L +A + K     + +EG   +W    PN L +    GT  E  VTKRS E   VD F +SE+ + V D +A                   DT    V ++ A++ +  F      +EG+E+        F+   P +   K RI+ ER
Sbjct:   95 TVNRRFF----CMVPVFATALHEYPASASVLLAQTAPYSNMLLRSLGIGDPDIYYPAFFEGTWNCYSTLIQVTTPQGE-DKADRRSVEFSRKQLGYAVPYQVRFTPFE--GR----------------VICDRLFTTTSLVEATVGK----NVIEEG---QWSPQQPNRLVLLLKGGTKVENLVTKRSAEYFQVDQFDTSEFSKQVFDNSAIKDGPPTVKASLNLTRYHWDTAAPVVTKMEAIQKVSIF---AVPMEGMEM--------FNTTTP-VTVYKYRIEFER 340          
The following BLAST results are available for this feature:
BLAST of EWM21588.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585101843|gb|EWM21588.1|0.000e+0100.00hypothetical protein Naga_100012g24 [Nannochlorops... [more]
gi|873226140|emb|CEM21975.1|3.239e-3135.48unnamed protein product [Vitrella brassicaformis C... [more]
gi|922858892|gb|KOO26972.1|2.692e-2737.17hypothetical protein Ctob_004877 [Chrysochromulina... [more]
gi|551665033|ref|XP_005835279.1|1.190e-2235.94hypothetical protein GUITHDRAFT_105906 [Guillardia... [more]
gi|1072237271|gb|OEU21998.1|3.386e-2032.59hypothetical protein FRACYDRAFT_232149 [Fragilario... [more]
gi|551558604|ref|XP_005766277.1|6.197e-1935.51hypothetical protein EMIHUDRAFT_451917 [Emiliania ... [more]
gi|397625348|gb|EJK67758.1|2.251e-1634.82hypothetical protein THAOC_11171 [Thalassiosira oc... [more]
gi|224000539|ref|XP_002289942.1|1.269e-1433.91predicted protein [Thalassiosira pseudonana CCMP13... [more]
gi|219116783|ref|XP_002179186.1|3.380e-1130.74predicted protein [Phaeodactylum tricornutum CCAP ... [more]
gi|1026761432|gb|OAE22911.1|5.008e-927.78hypothetical protein AXG93_2777s1030 [Marchantia p... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9072rna9072Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications