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Properties
| Property Name | Value |
|---|
| Product | Tetratricopeptide-like helical |
| Orig transcript id | gnl|cribi|Naga_100012g21.1901.mrna |
| Orig protein id | gnl|cribi|Naga_100012g21.1901 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037251.1 | supercontig | KK037251.1:266419..268471 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna9068 ID=rna9068|Name=rna9068|organism=Nannochloropsis gaditana|type=mRNA|length=657bp
ATGCTCCGAGAGAGCCGACAACAGGTTTGCGACTTGATTCTCGGAGCGAA
TGACACGGCCGCCGAGGACGTCGTGTCAGAGCTGCTCACGGTCCTCTTGC
GGCTTTCCGCGGAGGAAAGTATCGAAGATGTCTCACAGATTGTCTGTGCC
TGCCTGGGCGAGCTTGGAGCTATCGATCCGGCGCGTGTAAGCATTTCACT
TTTCGATAATAGGGCCGCTCGGAGTGCAGCGCTGACAAGTTCCTCATACT
CCACTTCCGTCTCTACCTCGTCTACTCCATCTTCTGCGCCCCTGCTTGCG
CCCTGGCACACCAACGACTCGAAGATGGCGCTTGAGCTCTTGGAGCATAT
GCTCGTACCCAAACTACGAGCTGCCACGGCGGACAAGGACAGGTTTCCAT
ACGCTGTGCAAGAACTCCTCCACCTCCTTTACAGCCGAGGCATGGAACGT
CTCAAAACCACGGGCGCGGAAGAAGAGGCGACACACGAAAGAGGGTTAGA
CTTGGAGGAGAACGGGCAACGAAAGGCAGGGGCATCTTCAGGACGCGAAG
GGAAGAAGGAGCTGGCTTTGCAGCCGCAACAATCCGACTCGCGAAAGGGA
AAAGGAGAGGAAGGACAGGCCAAAGGGCCCTCCTTTTTTGAACGCGGGTG
GTGGTAA back to topprotein sequence of rna9068 >rna9068-protein ID=rna9068-protein|Name=rna9068|organism=Nannochloropsis gaditana|type=polypeptide|length=401bp
MGLGGPPQGPGRCGLYPQIVRRMGRGGNDLVGQERPGGRGIQERKRQWEG
RGRPCPHRAGQVSGRTGLECVGEGELVRPHVRRRRPALPIPPGAWPPEPD
APRKGPPAPGPLGMGDRHVGRIGALRRGSGPGGGIMDPPPLQCWQGPGDL
VYVPPGWKSMRVHVGDVVMVEGEGVRGGGVRARGGEKEDVEDRIFHYHAE
ALARHPEDVESLIAAGEAYARQSLRATTTVNRDSLWRESFMCVHTAVNLR
PCDPTTHLVAAQVLLANRSASHDENHRQAKAIIHRAEETFFTLSSPSCPF
PDLPRERVAALLASARLRFAQFFLWIGDETEAKRAVAEVLALRPTYLEAH
QLLVLVLKKSGRDREAREAMHLALIALGPRGRERSVIEAFESLLEPQKDC
R back to topmRNA from alignment at KK037251.1:266419..268471+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna9068 ID=rna9068|Name=rna9068|organism=Nannochloropsis gaditana|type=mRNA|length=2053bp|location=Sequence derived from alignment at KK037251.1:266419..268471+ (Nannochloropsis gaditana)
AATTAAACCTCTGACTGCTCGCCAACTTTGATTCAAGCATGGCTTCCGTC
TGCCACCCATGCTGATGTAACAACCCTACGTACTTACACAGACTCGAACT
CGTCTGTATCAAATCTCCCATTTTGAGTGCCAGTACTTCCATTTGCCCTA
ATTTCTGGCCTCCCCCGCGCAAAGACGCATGGCCTCTGCACCGGCAAGGC
CCTACCATCGCCAATCCCTATGGGCAAACCCCTCCTCGCTACTGCTCTCT
TTGGCATTTGCCGCATTCGCAGTTGCCTTCCATGCTCTTTTCATGACACC
GTGGCTGGAGGCACGAGCCGCTCGGTTGCGTGGAGGCTGGGCTCGGGAGT
CTATGGACGAGGAGTCTTCGATAAGACACGGAGGATGTGATTTTTTGAGG
CTTGACGCGGCTGTTCTCGACACGGACACGTTTGAGCACCTGTACAGGGG
ACAACGCCCGGTAGTACTGTCGTCGTCAACGAGTCTGGCGGCGTTTTGGA
ATCAGCCTCGGTGGCCATtcgtgcaggaggagaaggaggtgcagATGGAG
GCGTGGGGACGAGACCGGCTTCTAAAGCGGCACGGAAAGAACCTGACTGT
GCTGGTAGGGGGTTGGGAggcttgggaggggcagaCCAAGGCCGGCATGT
TTGCCTTGGGAAATGGGGTTGGCGGTGTCCGACTGCCTTTACAAGAGTTT
GTGCACAGGTACCTGGACCGCCCGGGTGGCGCGGCCGGTGGAGACGCAgg
cgccgaggaggccgtgaAGGACTTTGCGCACACCGGCACAGTTTCatggg
ccttggaggacctCCCCAGGGACCTGGCAGATGCGGTTTGTACCCCCAAA
TTGTTCGACGcatgggccggggaggaaatgaccTGGTCGGGCAGGAAAgg
ccagggggaagaggcatcCAGGAACGGAAAAGAcaatgggaaggaagagg
caggccGTGTCCGCATCGCGCTGGGCAAGtctcggggaggacggggttGG
AGTGtgtcggagagggagagctggTCAGGCCTCATGTTCGGAGGCGCCGT
CCTGCACTACCTATACCCCCCGGGGCGTGGCCTCCGGAACCTGACGCTCC
AAGGAAGGGGCCACCCGCTCCTGGGCCCCTTGGAATGGGCGACAGGCACG
TTGGGCGTATTGGAGCACTACGACGGGGTtcggggcccgggggggggatc
aTGGACCCGCCGCCCTTGCAATGCTGGCAAGGACCAGGGGACCTCGTGTA
CGTGCCGCCGGGCTGGAAGAGCATGCGGGTGCACGTTGGGGACGTGGTCA
TGGtagaaggcgagggcgtgcggggcgggggagtaCGGgcgcggggcggg
gaaaaggaggatgtggaggacaggatATTCCACTACCATGCAGAGGCCCT
CGCGAGGCATCCCGAGGACGTGGAATCCCTCATAGCGGCCGGGGAGGCGT
ATGCCCGACAAAGCCTTCGGGCGACCACGACCGTGAATCGAGACTCTTTG
TGGCGGGAGTCCTTCATGTGCGTACACACCGCCGTGAACCTCCGTCCCTG
CGACCCGACTACCCATCTCGTCGCCGCCCAGGTCCTGTTGGCCAATCGGA
GCGCCTCCCACGACGAGAACCACAGGCAAGCCAAGGCCATCATCCATAGG
GCCGAAGAGACCTTCTTCAcactctcttctccttcctgcccctttcccgA
CCTTCCTCGGGAACGTGTCGCGGCCTTGTTGGCCTCGGCTCGACTGcgct
tcgcgcaatttttcttGTGGATAGGCGATGAAACCGAAGCTAAACGAGCT
GTGGCAGAGGTGTTGGCACTACGGCCGACATATCTCGAAGCGCATCAATT
GCTGGTGCTTGTCCTGAAGAAAAGCgggagagacagagaagCGCGAGAAG
CGATGCACCTTGCCCTTATTGCTTTAgggccgcgggggcgggaaaggagt
gTAATAGAAGCATTTGAGAGTTTACTCGAACCTCAAAAAGACTGTAGATA
ATAACTTTGTAACAAAATTGAGTAAAGTAATGTATTGAAGCGAGTAAATT
ACC back to topCoding sequence (CDS) from alignment at KK037251.1:266419..268471+ >rna9068 ID=rna9068|Name=rna9068|organism=Nannochloropsis gaditana|type=CDS|length=1206bp|location=Sequence derived from alignment at KK037251.1:266419..268471+ (Nannochloropsis gaditana)
atgggccttggaggacctCCCCAGGGACCTGGCAGATGCGGTTTGTACCC
CCAAATTGTTCGACGcatgggccggggaggaaatgaccTGGTCGGGCAGG
AAAggccagggggaagaggcatcCAGGAACGGAAAAGAcaatgggaagga
agaggcaggccGTGTCCGCATCGCGCTGGGCAAGtctcggggaggacggg
gttGGAGTGtgtcggagagggagagctggTCAGGCCTCATGTTCGGAGGC
GCCGTCCTGCACTACCTATACCCCCCGGGGCGTGGCCTCCGGAACCTGAC
GCTCCAAGGAAGGGGCCACCCGCTCCTGGGCCCCTTGGAATGGGCGACAG
GCACGTTGGGCGTATTGGAGCACTACGACGGGGTtcggggcccggggggg
ggatcaTGGACCCGCCGCCCTTGCAATGCTGGCAAGGACCAGGGGACCTC
GTGTACGTGCCGCCGGGCTGGAAGAGCATGCGGGTGCACGTTGGGGACGT
GGTCATGGtagaaggcgagggcgtgcggggcgggggagtaCGGgcgcggg
gcggggaaaaggaggatgtggaggacaggatATTCCACTACCATGCAGAG
GCCCTCGCGAGGCATCCCGAGGACGTGGAATCCCTCATAGCGGCCGGGGA
GGCGTATGCCCGACAAAGCCTTCGGGCGACCACGACCGTGAATCGAGACT
CTTTGTGGCGGGAGTCCTTCATGTGCGTACACACCGCCGTGAACCTCCGT
CCCTGCGACCCGACTACCCATCTCGTCGCCGCCCAGGTCCTGTTGGCCAA
TCGGAGCGCCTCCCACGACGAGAACCACAGGCAAGCCAAGGCCATCATCC
ATAGGGCCGAAGAGACCTTCTTCAcactctcttctccttcctgccccttt
cccgACCTTCCTCGGGAACGTGTCGCGGCCTTGTTGGCCTCGGCTCGACT
GcgcttcgcgcaatttttcttGTGGATAGGCGATGAAACCGAAGCTAAAC
GAGCTGTGGCAGAGGTGTTGGCACTACGGCCGACATATCTCGAAGCGCAT
CAATTGCTGGTGCTTGTCCTGAAGAAAAGCgggagagacagagaagCGCG
AGAAGCGATGCACCTTGCCCTTATTGCTTTAgggccgcgggggcgggaaa
ggagtgTAATAGAAGCATTTGAGAGTTTACTCGAACCTCAAAAAGACTGT
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