rna9050, rna9050 (mRNA) Nannochloropsis gaditana

Overview
Namerna9050
Unique Namerna9050
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length584
Alignment locationKK037251.1:201234..201763 -

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Properties
Property NameValue
Productlysyl-trna synthetase
Orig transcript idgnl|cribi|Naga_100012g1.1895.mrna
Orig protein idgnl|cribi|Naga_100012g1.1895
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037251.1supercontigKK037251.1:201234..201763 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100012g1gene8777Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna9050rna9050-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM21563.1cds9020Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna9050 ID=rna9050|Name=rna9050|organism=Nannochloropsis gaditana|type=mRNA|length=584bp
CCTCGATCGCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTACCCCAG
CAACTCGTGATCGGGGGCCTGGACCGCGTCTATGAGATCGGGCGCCAGTT
CCGGAATGAGGGCATCGACCTAACGCACAATCCTGAGTTCACCACCTGCG
AATTTTACATGGCCTACGCGGACTACCACGACCTGATGGACCTGACGGAG
ACGCTCTTCTCCGAGATGGTCAAAGAGATCACTGGCGGCTACGTCATCAA
GTACCACCCCGAGGGTCCCGGGGGCTCGGAGCTGACCATTGACTTCTCCC
CCCCCTGGAAGCGGATCCCCATGGTGGAAGGTCTCGAGGAGAAGCTCAAG
GTGAAACTGCCGCCCTTGGACACGGAGGCGGCCCGCGAGGTCCTGGAAGG
GCTCTGTCAGAAGCACGACGTGGCCTGCTCGGCGCCGCGGACCGTCCCTC
GGCTTCTCGACAAGCTGGTGGGGGAGTTCTTGGAGGAGGACATTATCTCC
CCCGCCTTTATCACTGAGCACCCAGAGATCATGAGCCCCTTGGCCAAGTC
CCACCGGACCAAGCCCGGCTTGACCGAACGGTAA
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protein sequence of rna9050

>rna9050-protein ID=rna9050-protein|Name=rna9050|organism=Nannochloropsis gaditana|type=polypeptide|length=107bp
MADESNSNGGEPLSKNALKKKLKAEALAKAKAEKLAAAPAPATRSKAGAD
GGDNEEELTPSQYFEARLRMIAEMEAAGTSPYPHKFHVTQGIPAFVDAYA
GLESGRK
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mRNA from alignment at KK037251.1:201234..201763-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna9050 ID=rna9050|Name=rna9050|organism=Nannochloropsis gaditana|type=mRNA|length=530bp|location=Sequence derived from alignment at KK037251.1:201234..201763- (Nannochloropsis gaditana)
AAACAGAGAAGCCCGTCATAAATCGGCAAGTATGGCTGACGAATCAAATA
GCAACGGAGGAGAGCCTCTGAGTAAAAACGCCCTCAAAAAGAAATTGAAG
GTTGGTGTTATCTTTCGTACCCCCCCTCCTTCCTCTTGACGGGCCCTACT
CCATCGTCCTCTTCGTCGAAGCCCTTTTTTCTGCTCTAACAAGCCATAGC
TGGGATATTACAAGTGGCTGCAATTTTGGGTTTTTGATCTTCATCCTTCC
ATTTGCCTACCTCCCCCCTCTAGGCGGAGGCCCTTGCCAAGGCGAAAGCG
GAGAAATTAGCCGCTGCACCCGCCCCCGCGACACGGAGCAAAGCGGGAGC
AGATGGTGGCGACAATGAGGAGGAGCTCACGCCGTCCCAGTATTTCGAAG
CCCGCTTGCGCATGATTGCCGAGATGGAAGCGGCGGGGACGAGCCCCTAC
CCTCATAAGTTCCATGTCACCCAGGGCATTCCAGCGTTTGTGGACGCGTA
TGCGGGGTTGGAGTCAGGAAGAAAGTGAGT
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Coding sequence (CDS) from alignment at KK037251.1:201234..201763-

>rna9050 ID=rna9050|Name=rna9050|organism=Nannochloropsis gaditana|type=CDS|length=648bp|location=Sequence derived from alignment at KK037251.1:201234..201763- (Nannochloropsis gaditana)
GCGGAGGCCCTTGCCAAGGCGAAAGCGGAGAAATTAGCCGCTGCACCCGC
CCCCGCGACACGGAGCAAAGCGGGAGCAGATGGTGGCGACAATGAGGAGG
AGCTCACGCCGTCCCAGTATTTCGAAGCCCGCTTGCGCATGATTGCCGAG
ATGGAAGCGGCGGGGACGAGCCCCTACCCTCATAAGTTCCATGTCACCCA
GGGCATTCCAGCGTTTGTGGACGCGTATGCGGGGTTGGAGTCAGGAAGAA
AGTGAATGGCTGACGAATCAAATAGCAACGGAGGAGAGCCTCTGAGTAAA
AACGCCCTCAAAAAGAAATTGAAGGCGGAGGCCCTTGCCAAGGCGAAAGC
GGAGAAATTAGCCGCTGCACCCGCCCCCGCGACACGGAGCAAAGCGGGAG
CAGATGGTGGCGACAATGAGGAGGAGCTCACGCCGTCCCAGTATTTCGAA
GCCCGCTTGCGCATGATTGCCGAGATGGAAGCGGCGGGGACGAGCCCCTA
CCCTCATAAGTTCCATGTCACCCAGGGCATTCCAGCGTTTGTGGACGCGT
ATGCGGGGTTGGAGTCAGGAAGAAAGTGAATGGCTGACGAATCAAATAGC
AACGGAGGAGAGCCTCTGAGTAAAAACGCCCTCAAAAAGAAATTGAAG
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Synonyms
Publications