|
|
Properties
| Property Name | Value |
|---|
| Product | glycosyl transferase family 2 |
| Orig transcript id | gnl|cribi|Naga_101432g1.8357.mrna |
| Orig protein id | gnl|cribi|Naga_101432g1.8357 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037251.1 | supercontig | KK037251.1:197043..198205 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna9047 ID=rna9047|Name=rna9047|organism=Nannochloropsis gaditana|type=mRNA|length=1525bp
ATGGTTTGGGGGGGGGGGGAGGAAGTGCACGATGGAGAGGAGGAGGAGGA
GGAGGAAGAGGAGGGGGAGGAGGAGGAGGAGGAAGAGGAGGAGGAGCTCA
CGAGGGGTCGCCACTTATTTGATTTGGAAGGTGGTGAAGAGGAAGAGGAG
GAGGACGACGAGGTCAGGGAGGTTGGTAAGAGGGAAAGGGAGGAGGAGCA
AGAAAGAGAGGAGGAGGAGGAGGGGGAGGAGGAGGAGAGGGAAGGGGCCC
ATGCCGTCGGTGATAAAACTCGAGGACCACGGGGCGACACTTCCAGCAAC
CAGCAAGGGCCGAATAATGGATATTCAAACAGCCCACGTTTCAGTAACGG
ATGTAACGGTCGGGAAAAGCCGAGCAGCCCCGGGCGGCCCAAAAGGAGGC
ACCGAGGGCCCACGGACCGCAGCGTCCTCCTTCTGGCCAAGACTTTGGGA
CGAAATCTGCAAGTTTTGGACCTGGAGGGCTGCGAGGGCGTGAGCAATCA
GGGCCTTCTCTCCCTTTTCCTCGCCTGCCACCGTCTTCAACGGCTGGTCT
TGAACGGACTGCCGCGGGTGGATGACGTGGCCGTCCAGGCTCTGCTGCCG
CGTCGGAACCGCCATTTGAGGTTGCCTTGCCTGGTGGATTTAAATTTAAA
CGTGTGCCGAGGCGTGTCCTTGCATGCGGTGCAGGAACTCAAGCGCCAAC
GCCCGGACATTCTTCGGGTTACCTACCGAAGGGAAGTCGCCCTCCGAGGC
CCAACGTCTTTTTGAAAACTTGAATATTTCTCCAAGTTGTCCAGCGGTTG
CGGACTGCGTACCGGCAGAATAGCTAGGAGAGGACTGGTAAAGAGATCCT
CCGGGAATAATTGTCATTCAGAAAGGGATGGCTGTGAAACTAGGTGCCCG
GGGGGGAGGTCATATGGTATGGCGACAGGTAGGAGTGGAGGGGGAAAACC
CTTTTCAAACGAAAATGCAGGGTCGACTTATGGGCTGGAAGGAGGAGAGT
GGATCGATGGTTGGAGGCACAGACTAGGTAAAGGTAGTCAATGGGTAAAA
TAAAGGGATGCGGGAGGCGTTGAGGGATAAAGGAGGGAGGGCAGGGCGAG
ATAGTAACAAGGGTGCCGGGCAGACTGTTTGCGGTGGAAAGTAGAGGCGA
TCAACAATATAGGCGAGAGTAGAGCACATAGAGAAGGAAATAGTTTGGGA
GGAAAAGGGCGCAAATGGGCGGCCAGGGTAGAGTAGATAGGCGGGAGAAG
GAGGAGACGCGAGGGCAGAGGATACCTGCCGCAGGGACAGGAATGTTGTC
ATCCGACAGCACTTTATAGCCATTCAAATAATAGTGTATTTGACACGCGT
CCCAAACTCTTCGTCGCTGACACGAAAGAGGGGGGAAAAATATGTGCCAC
AGGAAAGAATAGAAGATTATGCCACAGGAAAAATAAAACGGCGCATGTCA
GGAAATGATTGGAGGAGATGCGGGGGATAACCCACGCCCTGAGGCCCCGT
TCACGTTCCTCTCGATACAACGACC back to topprotein sequence of rna9047 >rna9047-protein ID=rna9047-protein|Name=rna9047|organism=Nannochloropsis gaditana|type=polypeptide|length=352bp
MFSARAPHILPVLPQESTPTPSTTPSSSNREEPSARTSPGRKLKIHDPHV
EVIVVDGGSTDGSERVARALGARVIRAPTAGRARQMNLGAAAANGDILLF
LHADTLLPPTWEDEVKGAFAHHPSLLATAFRLRIMAPSSLFRVIEAGVSA
RSRWPWSMPYGDQALAVRRSVFEAVGGYPDVPVMEDFSFIQALHKMARTP
PTSRPGGRDRQERKGGRVARQEGGRREETTEAGGLYGGKIRLLPSAVRTS
ARRWERLGVVRTTLVNQCMVLGWYVKVDPNKLAVFYRQARAGGTGGGRER
GVEKRLVSLRGLWRRGGEEGAGRERGNEGREGGQAEGPGKAPAPPVSIRM
GV back to topmRNA from alignment at KK037251.1:197043..198205+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna9047 ID=rna9047|Name=rna9047|organism=Nannochloropsis gaditana|type=mRNA|length=1163bp|location=Sequence derived from alignment at KK037251.1:197043..198205+ (Nannochloropsis gaditana)
ATGTTTtccgcccgggcccctcaCATattgcccgtcctcccacaGGAAAG
CACGCCGACACCAAGCACcacgccgtcctcttccaaccgGGAGGAACCCT
CTGCTCGGACAAGCCCAGGCCGCAAGCTCAAAATCCACGACCCCCACGTG
GAAGTCATCGTGGTGGACGGGGGGAGCACGGACGGCTCGGAACGAGTGGC
CCGTGCCTTGGGTGCCCGCGTCATTCGCGCCCCCACGGCCGGTCGCGCCC
GGCAAATGAACCTGggcgccgccgctgccaatgGAGACATCCTCTTGTTC
CTCCACGCCGAcaccctcctgccccctacGTGGGAGGATGAGGTGAAAGG
CGCCTTCGcccaccacccttccctcctggccaCGGCGTTCCGCCTCCGCA
TCATGgcaccctcctcgctctttcgGGTGATTGAAGCCGGCGTGAGCGCG
CGCAGTCGATGGCCCTGGTCGATGCCGTACGGGGAccaggccttggccgt
gcGCCGGTCGGTCTTCGAGGCGGTGGGTGGATACCCGGATGTTCCCGTCA
TGGAGgacttctccttcatccagGCCCTGCacaaaatggcgcgaacgccc
ccaacctcccgcccaggcGGTCGCGACAGGCAAGAGCGGAAGGGTGGGCG
GGTGGCAAGgcaagaaggggggcggagagaggaaacgacggaggcagggg
gccTCTACGGCGGGAAGATCCGGCTCCTGCCCTCCGCGGTTCGGACATCG
GCAAGGCGATGGGAGAGGCTGGGCGTGGTGCGAACCACCCTGGTGAACCA
GTGCATGGTTTTGGGGTGGTATGTGAAGGTGGATCCGAATAAGTTGGCGG
TGTTTTACCGAcaggcaagggcgggagggacgggaggagggagggagaga
ggggtggagaagCGTTTGGTCAGCTTGAGGGGATTgtggagacgaggggg
ggaggagggggcagggagggaaagagggaatgaagggagggagggaggac
aggcagAGGGACCAGGCAAggctccagcgcctccagttTCGATAAGGATG
GGGGTGTAAGTAGGATGCAGAACGAAGGACGCGCGAGCCTCTGTACGATG
CAATGAAAGACATAAAGTGACTTGGCACGCAGACGATACATCGCTTCGTC
AAGGTCACTCGCG back to topCoding sequence (CDS) from alignment at KK037251.1:197043..198205+ >rna9047 ID=rna9047|Name=rna9047|organism=Nannochloropsis gaditana|type=CDS|length=1059bp|location=Sequence derived from alignment at KK037251.1:197043..198205+ (Nannochloropsis gaditana)
ATGTTTtccgcccgggcccctcaCATattgcccgtcctcccacaGGAAAG
CACGCCGACACCAAGCACcacgccgtcctcttccaaccgGGAGGAACCCT
CTGCTCGGACAAGCCCAGGCCGCAAGCTCAAAATCCACGACCCCCACGTG
GAAGTCATCGTGGTGGACGGGGGGAGCACGGACGGCTCGGAACGAGTGGC
CCGTGCCTTGGGTGCCCGCGTCATTCGCGCCCCCACGGCCGGTCGCGCCC
GGCAAATGAACCTGggcgccgccgctgccaatgGAGACATCCTCTTGTTC
CTCCACGCCGAcaccctcctgccccctacGTGGGAGGATGAGGTGAAAGG
CGCCTTCGcccaccacccttccctcctggccaCGGCGTTCCGCCTCCGCA
TCATGgcaccctcctcgctctttcgGGTGATTGAAGCCGGCGTGAGCGCG
CGCAGTCGATGGCCCTGGTCGATGCCGTACGGGGAccaggccttggccgt
gcGCCGGTCGGTCTTCGAGGCGGTGGGTGGATACCCGGATGTTCCCGTCA
TGGAGgacttctccttcatccagGCCCTGCacaaaatggcgcgaacgccc
ccaacctcccgcccaggcGGTCGCGACAGGCAAGAGCGGAAGGGTGGGCG
GGTGGCAAGgcaagaaggggggcggagagaggaaacgacggaggcagggg
gccTCTACGGCGGGAAGATCCGGCTCCTGCCCTCCGCGGTTCGGACATCG
GCAAGGCGATGGGAGAGGCTGGGCGTGGTGCGAACCACCCTGGTGAACCA
GTGCATGGTTTTGGGGTGGTATGTGAAGGTGGATCCGAATAAGTTGGCGG
TGTTTTACCGAcaggcaagggcgggagggacgggaggagggagggagaga
ggggtggagaagCGTTTGGTCAGCTTGAGGGGATTgtggagacgaggggg
ggaggagggggcagggagggaaagagggaatgaagggagggagggaggac
aggcagAGGGACCAGGCAAggctccagcgcctccagttTCGATAAGGATG
GGGGTGTAA back to top
|