EWM21655.1, cds9017 (CDS) Nannochloropsis gaditana
|
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM21655.1 vs. NCBI_GenBank
Match: gi|585101912|gb|EWM21655.1| (glycosyl transferase family 2 [Nannochloropsis gaditana]) HSP 1 Score: 700.664 bits (1807), Expect = 0.000e+0 Identity = 352/352 (100.00%), Postives = 352/352 (100.00%), Query Frame = 0
Query: 1 MFSARAPHILPVLPQESTPTPSTTPSSSNREEPSARTSPGRKLKIHDPHVEVIVVDGGSTDGSERVARALGARVIRAPTAGRARQMNLGAAAANGDILLFLHADTLLPPTWEDEVKGAFAHHPSLLATAFRLRIMAPSSLFRVIEAGVSARSRWPWSMPYGDQALAVRRSVFEAVGGYPDVPVMEDFSFIQALHKMARTPPTSRPGGRDRQERKGGRVARQEGGRREETTEAGGLYGGKIRLLPSAVRTSARRWERLGVVRTTLVNQCMVLGWYVKVDPNKLAVFYRQARAGGTGGGRERGVEKRLVSLRGLWRRGGEEGAGRERGNEGREGGQAEGPGKAPAPPVSIRMGV 352
MFSARAPHILPVLPQESTPTPSTTPSSSNREEPSARTSPGRKLKIHDPHVEVIVVDGGSTDGSERVARALGARVIRAPTAGRARQMNLGAAAANGDILLFLHADTLLPPTWEDEVKGAFAHHPSLLATAFRLRIMAPSSLFRVIEAGVSARSRWPWSMPYGDQALAVRRSVFEAVGGYPDVPVMEDFSFIQALHKMARTPPTSRPGGRDRQERKGGRVARQEGGRREETTEAGGLYGGKIRLLPSAVRTSARRWERLGVVRTTLVNQCMVLGWYVKVDPNKLAVFYRQARAGGTGGGRERGVEKRLVSLRGLWRRGGEEGAGRERGNEGREGGQAEGPGKAPAPPVSIRMGV
Sbjct: 1 MFSARAPHILPVLPQESTPTPSTTPSSSNREEPSARTSPGRKLKIHDPHVEVIVVDGGSTDGSERVARALGARVIRAPTAGRARQMNLGAAAANGDILLFLHADTLLPPTWEDEVKGAFAHHPSLLATAFRLRIMAPSSLFRVIEAGVSARSRWPWSMPYGDQALAVRRSVFEAVGGYPDVPVMEDFSFIQALHKMARTPPTSRPGGRDRQERKGGRVARQEGGRREETTEAGGLYGGKIRLLPSAVRTSARRWERLGVVRTTLVNQCMVLGWYVKVDPNKLAVFYRQARAGGTGGGRERGVEKRLVSLRGLWRRGGEEGAGRERGNEGREGGQAEGPGKAPAPPVSIRMGV 352
BLAST of EWM21655.1 vs. NCBI_GenBank
Match: gi|506435744|ref|WP_015955461.1| (glycosyl transferase [Cyanothece sp. PCC 7424] >gi|218173133|gb|ACK71866.1| glycosyl transferase family 2 [Cyanothece sp. PCC 7424]) HSP 1 Score: 190.66 bits (483), Expect = 1.068e-55 Identity = 104/243 (42.80%), Postives = 146/243 (60.08%), Query Frame = 0
Query: 46 HDPHVEVIVVDGGSTDGSERVARALGARVIRAPTAGRARQMNLGAAAANGDILLFLHADTLLPPTWEDEVKGAFAHHPSLLATAFRLRIMAPSSLFRVIEAGVSARSRWPWSMPYGDQALAVRRSVFEAVGGYPDVPVMEDFSFIQALHKMARTPPTSRPGGRDRQERKGGRVARQEGGRREETTEAGGLYGGKIRLLPSAVRTSARRWERLGVVRTTLVNQCMVLGWYVKVDPNKLAVFYRQ 288
HD +E+IVVDGGS D + ++A+ LG +VI P + RA QMNLGA+ A G+ILLFLHADT+LP +++ VK + P ++A AF+L I + R+IE V+ RSR+ S+PYGDQA+ V VF+ +GG+ D+P+MEDF ++Q L RR GKI + P +V TS RRW +LGV +TTL+NQ ++LG+Y+ V P+KLA FYR+
Sbjct: 26 HDLDIEIIVVDGGSQDQTVKIAQDLGVKVISCPVSRRADQMNLGASVATGEILLFLHADTILPDDYKNWVKLTLS-QPQIIAGAFQLGIESEQLALRLIEVMVNWRSRF-LSLPYGDQAIFVDSGVFQQMGGFADLPIMEDFEWVQRLR------------------------------RR-----------GKIGIAPVSVLTSDRRWRKLGVFQTTLINQLVILGYYLGVSPDKLATFYRK 225
BLAST of EWM21655.1 vs. NCBI_GenBank
Match: gi|504955203|ref|WP_015142305.1| (glycosyl transferase [Pleurocapsa minor] >gi|427978397|gb|AFY75997.1| glycosyl transferase [Pleurocapsa sp. PCC 7327]) HSP 1 Score: 190.66 bits (483), Expect = 1.219e-55 Identity = 99/241 (41.08%), Postives = 141/241 (58.51%), Query Frame = 0
Query: 46 HDPHVEVIVVDGGSTDGSERVARALGARVIRAPTAGRARQMNLGAAAANGDILLFLHADTLLPPTWEDEVKGAFAHHPSLLATAFRLRIMAPSSLFRVIEAGVSARSRWPWSMPYGDQALAVRRSVFEAVGGYPDVPVMEDFSFIQALHKMARTPPTSRPGGRDRQERKGGRVARQEGGRREETTEAGGLYGGKIRLLPSAVRTSARRWERLGVVRTTLVNQCMVLGWYVKVDPNKLAVFY 286
+ +E+I+VDGGS D + +AR LG +VI +P GRA QMNLGAAAA G+ILLFLHADT LP + + ++ + P +A AF L I + R++E V+ RSR+ S+PYGDQA+ ++ S+F +GG+PD+P+MEDF FIQ L K GKI + P+ V TS+RRW++LG+ +TTL+NQ ++LG+Y+ + P KLA Y
Sbjct: 26 NSSDIEIIIVDGGSQDRTVELARELGVKVIVSPQFGRANQMNLGAAAATGNILLFLHADTHLPTGYSEIIQETLS-RPQTVAGAFELAIDSQEKSLRLVERVVNLRSRF-CSLPYGDQAIFLKASIFREIGGFPDLPIMEDFEFIQCLKK-----------------------------------------RGKITIAPAKVITSSRRWQKLGIFKTTLINQLIILGYYLGISPKKLARLY 223
BLAST of EWM21655.1 vs. NCBI_GenBank
Match: gi|1053287130|ref|WP_066030069.1| (glycosyltransferase [Microcystis aeruginosa] >gi|1052161776|gb|AOC54244.1| glycosyl transferase, family 2 [Microcystis aeruginosa NIES-2481]) HSP 1 Score: 189.889 bits (481), Expect = 1.963e-55 Identity = 101/238 (42.44%), Postives = 141/238 (59.24%), Query Frame = 0
Query: 50 VEVIVVDGGSTDGSERVARALGARVIRAPTAGRARQMNLGAAAANGDILLFLHADTLLPPTWEDEVKGAFAHHPSLLATAFRLRIMAPSSLFRVIEAGVSARSRWPWSMPYGDQALAVRRSVFEAVGGYPDVPVMEDFSFIQALHKMARTPPTSRPGGRDRQERKGGRVARQEGGRREETTEAGGLYGGKIRLLPSAVRTSARRWERLGVVRTTLVNQCMVLGWYVKVDPNKLAVFYR 287
VE+IVVDGGSTD + +A LGA+VI +P+ GRA QMNLGA A GDILLFLH DTLLP ++ ++ + ++A AF L+I R++E V+ RSRW +S+PYGDQ + ++ S+F +GG+P++P+MEDF IQ L K GKI ++ +AV TSARRW++LGV +TTLVNQ +++G+Y+K+ P L FYR
Sbjct: 28 VEIIVVDGGSTDKTREIAEQLGAKVIISPSKGRAFQMNLGAKIAKGDILLFLHGDTLLPHEFQKQIINTLS-QSGIVAGAFELKIDGEEKTLRLVEKLVNWRSRW-FSLPYGDQGIFLKASIFADLGGFPELPIMEDFELIQRLKKR-----------------------------------------GKIAIVSAAVITSARRWQKLGVGKTTLVNQLVIIGYYLKIPPRLLKSFYR 222
BLAST of EWM21655.1 vs. NCBI_GenBank
Match: gi|517209039|ref|WP_018397857.1| (hypothetical protein [filamentous cyanobacterium ESFC-1]) HSP 1 Score: 189.889 bits (481), Expect = 3.370e-55 Identity = 99/241 (41.08%), Postives = 143/241 (59.34%), Query Frame = 0
Query: 50 VEVIVVDGGSTDGSERVARALGARVIRAPTAGRARQMNLGAAAANGDILLFLHADTLLPPTWEDEVKGAFAHHPSLLATAFRLRIMAPSSLFRVIEAGVSARSRWPWSMPYGDQALAVRRSVFEAVGGYPDVPVMEDFSFIQALHKMARTPPTSRPGGRDRQERKGGRVARQEGGRREETTEAGGLYGGKIRLLPSAVRTSARRWERLGVVRTTLVNQCMVLGWYVKVDPNKLAVFYRQAR 290
+E+I+VDGGS D + A+ LG +V +P GRA QMN GA A GDILLFLHADT LPP ++ ++ A A P ++A AF+L I +P R++E V RSR+ + +PYGDQAL + + F+ GG+PD+P+MEDF F++ L +P GKI L+P++V TSARRW++LGV +TT++NQ +VLG+++ V P +L +YRQ +
Sbjct: 39 IEIIIVDGGSQDNTLECAQNLGVKVFFSPQPGRAAQMNFGATQATGDILLFLHADTQLPPHYDGLIRAALA-QPGVMAGAFQLGIDSPEMSLRLVEKMVIVRSRF-FQLPYGDQALFLTQETFKTCGGFPDLPIMEDFEFVRRL----------KP-------------------------------QGKIVLVPASVTTSARRWQKLGVFKTTIINQIIVLGYFLGVSPQQLRNWYRQQK 236
BLAST of EWM21655.1 vs. NCBI_GenBank
Match: gi|488839828|ref|WP_002752234.1| (glycosyl transferase [Microcystis aeruginosa] >gi|389680140|emb|CCH91162.1| Similar to tr|Q116L6|Q116L6_TRIEI Glycosyl transferase [Microcystis aeruginosa PCC 9432]) HSP 1 Score: 189.119 bits (479), Expect = 3.668e-55 Identity = 98/238 (41.18%), Postives = 141/238 (59.24%), Query Frame = 0
Query: 50 VEVIVVDGGSTDGSERVARALGARVIRAPTAGRARQMNLGAAAANGDILLFLHADTLLPPTWEDEVKGAFAHHPSLLATAFRLRIMAPSSLFRVIEAGVSARSRWPWSMPYGDQALAVRRSVFEAVGGYPDVPVMEDFSFIQALHKMARTPPTSRPGGRDRQERKGGRVARQEGGRREETTEAGGLYGGKIRLLPSAVRTSARRWERLGVVRTTLVNQCMVLGWYVKVDPNKLAVFYR 287
VE+IVVDGGSTD + +A LGA+VI +P+ GRA QMNLGA A GDILLFLH DTLL +++++ + ++A +F L+I R++E V+ RSRW +S+PYGDQ + ++ S+ +GG+P++P+MEDF IQ L K GKI ++ +AV TSARRW++LGV +TTLVNQ +++G+Y+K+ P+ L FYR
Sbjct: 28 VEIIVVDGGSTDKTREIAEKLGAKVIISPSKGRAFQMNLGAKIAKGDILLFLHGDTLLSQNYQEKIINTLS-QSGIVAGSFELKIDGEEKTLRLVEKLVNWRSRW-FSLPYGDQGIFLKASILTDLGGFPELPIMEDFELIQRLKKR-----------------------------------------GKIAIVSTAVITSARRWQKLGVAKTTLVNQLIIIGYYLKIPPHLLKNFYR 222
BLAST of EWM21655.1 vs. NCBI_GenBank
Match: gi|640534899|ref|WP_024968581.1| (glycosyl transferase [Microcystis aeruginosa]) HSP 1 Score: 189.119 bits (479), Expect = 3.788e-55 Identity = 98/238 (41.18%), Postives = 141/238 (59.24%), Query Frame = 0
Query: 50 VEVIVVDGGSTDGSERVARALGARVIRAPTAGRARQMNLGAAAANGDILLFLHADTLLPPTWEDEVKGAFAHHPSLLATAFRLRIMAPSSLFRVIEAGVSARSRWPWSMPYGDQALAVRRSVFEAVGGYPDVPVMEDFSFIQALHKMARTPPTSRPGGRDRQERKGGRVARQEGGRREETTEAGGLYGGKIRLLPSAVRTSARRWERLGVVRTTLVNQCMVLGWYVKVDPNKLAVFYR 287
VE+IVVDGGSTD + +A LGA+VI +P+ GRA QMNLGA A GDILLFLH DTLL +++++ + ++A +F L+I R++E V+ RSRW +S+PYGDQ + ++ S+ +GG+P++P+MEDF IQ L K GKI ++ +AV TSARRW++LGV +TTLVNQ +++G+Y+K+ P+ L FYR
Sbjct: 28 VEIIVVDGGSTDKTREIAEKLGAKVIISPSKGRAFQMNLGAKIAKGDILLFLHGDTLLSQNYQEKIINTLS-QSGIVAGSFELKIDGEEKTLRLVEKLVNWRSRW-FSLPYGDQGIFLKASILTDLGGFPELPIMEDFELIQRLKKR-----------------------------------------GKIAIVSTAVITSARRWQKLGVAKTTLVNQLIIIGYYLKIPPHLLKNFYR 222
BLAST of EWM21655.1 vs. NCBI_GenBank
Match: gi|513836916|ref|WP_016514397.1| (poly-beta-1,6 N-acetyl-D-glucosamine synthase [Microcystis aeruginosa] >gi|513478107|gb|EPF24433.1| Poly-beta-1,6-N-acetyl-D-glucosamine synthase [Microcystis aeruginosa SPC777] >gi|513478751|gb|EPF24779.1| Poly-beta-1,6-N-acetyl-D-glucosamine synthase [Microcystis aeruginosa SPC777]) HSP 1 Score: 188.734 bits (478), Expect = 5.405e-55 Identity = 99/238 (41.60%), Postives = 141/238 (59.24%), Query Frame = 0
Query: 50 VEVIVVDGGSTDGSERVARALGARVIRAPTAGRARQMNLGAAAANGDILLFLHADTLLPPTWEDEVKGAFAHHPSLLATAFRLRIMAPSSLFRVIEAGVSARSRWPWSMPYGDQALAVRRSVFEAVGGYPDVPVMEDFSFIQALHKMARTPPTSRPGGRDRQERKGGRVARQEGGRREETTEAGGLYGGKIRLLPSAVRTSARRWERLGVVRTTLVNQCMVLGWYVKVDPNKLAVFYR 287
VE+IVVDGGSTD + +A LGA+VI +P+ GRA QMNLGA A GDILLFLH DTLLP +++++ + ++A AF L+I R++E V+ RS W +S+PYGDQ + ++ S+ +GG+P++P+MEDF IQ L K GKI ++ +AV TSARRW++LGV +TTLVNQ +++G+Y+K+ P+ L FYR
Sbjct: 28 VEIIVVDGGSTDKTREIAEKLGAKVIISPSKGRAFQMNLGAKIAKGDILLFLHGDTLLPHEFQEQIINTLS-QSGIVAGAFELKIDGEEKNLRLVEKLVNWRSHW-FSLPYGDQGIFLKASILTDLGGFPELPIMEDFELIQRLKKR-----------------------------------------GKIAIVSTAVITSARRWQKLGVAKTTLVNQLIIIGYYLKIPPHLLKNFYR 222
BLAST of EWM21655.1 vs. NCBI_GenBank
Match: gi|779876718|ref|WP_045359091.1| (glycosyl transferase [Microcystis aeruginosa] >gi|718249724|dbj|GAL93367.1| glycosyl transferase, family 2 [Microcystis aeruginosa NIES-44]) HSP 1 Score: 188.734 bits (478), Expect = 5.643e-55 Identity = 101/238 (42.44%), Postives = 142/238 (59.66%), Query Frame = 0
Query: 50 VEVIVVDGGSTDGSERVARALGARVIRAPTAGRARQMNLGAAAANGDILLFLHADTLLPPTWEDEVKGAFAHHPSLLATAFRLRIMAPSSLFRVIEAGVSARSRWPWSMPYGDQALAVRRSVFEAVGGYPDVPVMEDFSFIQALHKMARTPPTSRPGGRDRQERKGGRVARQEGGRREETTEAGGLYGGKIRLLPSAVRTSARRWERLGVVRTTLVNQCMVLGWYVKVDPNKLAVFYR 287
VE+IVVDGGSTD + +A LGA+VI +P+ GRA QMNLGA A GDILLFLH DTLLP +++++ + ++A AF L+I R++E V+ RSRW S+PYGDQ + ++ S+F +GG+P++P+MEDF IQ L K GKI ++ +AV TSARRW++LGV +TTLVNQ +++G+Y+K+ P+ L FYR
Sbjct: 28 VEIIVVDGGSTDKTREIAEQLGAKVIISPSKGRAFQMNLGAKIAKGDILLFLHGDTLLPHEFQEQIINTLS-QSGIVAGAFELKIDGEEKPLRLVEKLVNWRSRW-LSLPYGDQGIFLKASIFADLGGFPELPIMEDFELIQRLKKR-----------------------------------------GKIAIVAAAVITSARRWQKLGVGKTTLVNQLIIIGYYLKIPPHLLKNFYR 222
BLAST of EWM21655.1 vs. NCBI_GenBank
Match: gi|817700463|ref|WP_046662955.1| (glycosyl transferase [Microcystis aeruginosa] >gi|815966698|gb|AKE65843.1| glycosyl transferase, family 2 [Microcystis aeruginosa NIES-2549]) HSP 1 Score: 188.734 bits (478), Expect = 5.704e-55 Identity = 100/238 (42.02%), Postives = 140/238 (58.82%), Query Frame = 0
Query: 50 VEVIVVDGGSTDGSERVARALGARVIRAPTAGRARQMNLGAAAANGDILLFLHADTLLPPTWEDEVKGAFAHHPSLLATAFRLRIMAPSSLFRVIEAGVSARSRWPWSMPYGDQALAVRRSVFEAVGGYPDVPVMEDFSFIQALHKMARTPPTSRPGGRDRQERKGGRVARQEGGRREETTEAGGLYGGKIRLLPSAVRTSARRWERLGVVRTTLVNQCMVLGWYVKVDPNKLAVFYR 287
VE+IVVDGGSTD + +A LGA+VI +P+ GRA QMNLGA A GDILLFLH DTLLP +++++ + + +A AF L+I R++E V+ RSRW S+PYGDQ + ++ S+ +GG+P++P+MEDF IQ L K GKI ++ +AV TSARRW++LGV +TTLVNQ +++G+Y+K+ P L FYR
Sbjct: 28 VEIIVVDGGSTDKTREIAEQLGAKVIISPSKGRAFQMNLGAKIAKGDILLFLHGDTLLPQNYQEQIINTLSQSGT-VAGAFELKIDGEEKTLRLVEKLVNWRSRWL-SLPYGDQGIFLKASILADLGGFPELPIMEDFELIQRLKKR-----------------------------------------GKIAIVAAAVITSARRWQKLGVGKTTLVNQLVIIGYYLKIPPRLLKSFYR 222 The following BLAST results are available for this feature:
BLAST of EWM21655.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
|