EWM21655.1, cds9017 (CDS) Nannochloropsis gaditana

Overview
NameEWM21655.1
Unique Namecds9017
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037251.1:197043..198101 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM21655.1
Productglycosyl transferase family 2
Orig transcript idgnl|cribi|Naga_101432g1.8357.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037251.1supercontigKK037251.1:197043..198101 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
Vocabulary: INTERPRO
TermDefinition
IPR029044Nucleotide-diphossugar_trans
IPR001173Glyco_trans_2-like
Homology
BLAST of EWM21655.1 vs. NCBI_GenBank
Match: gi|585101912|gb|EWM21655.1| (glycosyl transferase family 2 [Nannochloropsis gaditana])

HSP 1 Score: 700.664 bits (1807), Expect = 0.000e+0
Identity = 352/352 (100.00%), Postives = 352/352 (100.00%), Query Frame = 0
Query:    1 MFSARAPHILPVLPQESTPTPSTTPSSSNREEPSARTSPGRKLKIHDPHVEVIVVDGGSTDGSERVARALGARVIRAPTAGRARQMNLGAAAANGDILLFLHADTLLPPTWEDEVKGAFAHHPSLLATAFRLRIMAPSSLFRVIEAGVSARSRWPWSMPYGDQALAVRRSVFEAVGGYPDVPVMEDFSFIQALHKMARTPPTSRPGGRDRQERKGGRVARQEGGRREETTEAGGLYGGKIRLLPSAVRTSARRWERLGVVRTTLVNQCMVLGWYVKVDPNKLAVFYRQARAGGTGGGRERGVEKRLVSLRGLWRRGGEEGAGRERGNEGREGGQAEGPGKAPAPPVSIRMGV 352
            MFSARAPHILPVLPQESTPTPSTTPSSSNREEPSARTSPGRKLKIHDPHVEVIVVDGGSTDGSERVARALGARVIRAPTAGRARQMNLGAAAANGDILLFLHADTLLPPTWEDEVKGAFAHHPSLLATAFRLRIMAPSSLFRVIEAGVSARSRWPWSMPYGDQALAVRRSVFEAVGGYPDVPVMEDFSFIQALHKMARTPPTSRPGGRDRQERKGGRVARQEGGRREETTEAGGLYGGKIRLLPSAVRTSARRWERLGVVRTTLVNQCMVLGWYVKVDPNKLAVFYRQARAGGTGGGRERGVEKRLVSLRGLWRRGGEEGAGRERGNEGREGGQAEGPGKAPAPPVSIRMGV
Sbjct:    1 MFSARAPHILPVLPQESTPTPSTTPSSSNREEPSARTSPGRKLKIHDPHVEVIVVDGGSTDGSERVARALGARVIRAPTAGRARQMNLGAAAANGDILLFLHADTLLPPTWEDEVKGAFAHHPSLLATAFRLRIMAPSSLFRVIEAGVSARSRWPWSMPYGDQALAVRRSVFEAVGGYPDVPVMEDFSFIQALHKMARTPPTSRPGGRDRQERKGGRVARQEGGRREETTEAGGLYGGKIRLLPSAVRTSARRWERLGVVRTTLVNQCMVLGWYVKVDPNKLAVFYRQARAGGTGGGRERGVEKRLVSLRGLWRRGGEEGAGRERGNEGREGGQAEGPGKAPAPPVSIRMGV 352          
BLAST of EWM21655.1 vs. NCBI_GenBank
Match: gi|506435744|ref|WP_015955461.1| (glycosyl transferase [Cyanothece sp. PCC 7424] >gi|218173133|gb|ACK71866.1| glycosyl transferase family 2 [Cyanothece sp. PCC 7424])

HSP 1 Score: 190.66 bits (483), Expect = 1.068e-55
Identity = 104/243 (42.80%), Postives = 146/243 (60.08%), Query Frame = 0
Query:   46 HDPHVEVIVVDGGSTDGSERVARALGARVIRAPTAGRARQMNLGAAAANGDILLFLHADTLLPPTWEDEVKGAFAHHPSLLATAFRLRIMAPSSLFRVIEAGVSARSRWPWSMPYGDQALAVRRSVFEAVGGYPDVPVMEDFSFIQALHKMARTPPTSRPGGRDRQERKGGRVARQEGGRREETTEAGGLYGGKIRLLPSAVRTSARRWERLGVVRTTLVNQCMVLGWYVKVDPNKLAVFYRQ 288
            HD  +E+IVVDGGS D + ++A+ LG +VI  P + RA QMNLGA+ A G+ILLFLHADT+LP  +++ VK   +  P ++A AF+L I +     R+IE  V+ RSR+  S+PYGDQA+ V   VF+ +GG+ D+P+MEDF ++Q L                               RR           GKI + P +V TS RRW +LGV +TTL+NQ ++LG+Y+ V P+KLA FYR+
Sbjct:   26 HDLDIEIIVVDGGSQDQTVKIAQDLGVKVISCPVSRRADQMNLGASVATGEILLFLHADTILPDDYKNWVKLTLS-QPQIIAGAFQLGIESEQLALRLIEVMVNWRSRF-LSLPYGDQAIFVDSGVFQQMGGFADLPIMEDFEWVQRLR------------------------------RR-----------GKIGIAPVSVLTSDRRWRKLGVFQTTLINQLVILGYYLGVSPDKLATFYRK 225          
BLAST of EWM21655.1 vs. NCBI_GenBank
Match: gi|504955203|ref|WP_015142305.1| (glycosyl transferase [Pleurocapsa minor] >gi|427978397|gb|AFY75997.1| glycosyl transferase [Pleurocapsa sp. PCC 7327])

HSP 1 Score: 190.66 bits (483), Expect = 1.219e-55
Identity = 99/241 (41.08%), Postives = 141/241 (58.51%), Query Frame = 0
Query:   46 HDPHVEVIVVDGGSTDGSERVARALGARVIRAPTAGRARQMNLGAAAANGDILLFLHADTLLPPTWEDEVKGAFAHHPSLLATAFRLRIMAPSSLFRVIEAGVSARSRWPWSMPYGDQALAVRRSVFEAVGGYPDVPVMEDFSFIQALHKMARTPPTSRPGGRDRQERKGGRVARQEGGRREETTEAGGLYGGKIRLLPSAVRTSARRWERLGVVRTTLVNQCMVLGWYVKVDPNKLAVFY 286
            +   +E+I+VDGGS D +  +AR LG +VI +P  GRA QMNLGAAAA G+ILLFLHADT LP  + + ++   +  P  +A AF L I +     R++E  V+ RSR+  S+PYGDQA+ ++ S+F  +GG+PD+P+MEDF FIQ L K                                          GKI + P+ V TS+RRW++LG+ +TTL+NQ ++LG+Y+ + P KLA  Y
Sbjct:   26 NSSDIEIIIVDGGSQDRTVELARELGVKVIVSPQFGRANQMNLGAAAATGNILLFLHADTHLPTGYSEIIQETLS-RPQTVAGAFELAIDSQEKSLRLVERVVNLRSRF-CSLPYGDQAIFLKASIFREIGGFPDLPIMEDFEFIQCLKK-----------------------------------------RGKITIAPAKVITSSRRWQKLGIFKTTLINQLIILGYYLGISPKKLARLY 223          
BLAST of EWM21655.1 vs. NCBI_GenBank
Match: gi|1053287130|ref|WP_066030069.1| (glycosyltransferase [Microcystis aeruginosa] >gi|1052161776|gb|AOC54244.1| glycosyl transferase, family 2 [Microcystis aeruginosa NIES-2481])

HSP 1 Score: 189.889 bits (481), Expect = 1.963e-55
Identity = 101/238 (42.44%), Postives = 141/238 (59.24%), Query Frame = 0
Query:   50 VEVIVVDGGSTDGSERVARALGARVIRAPTAGRARQMNLGAAAANGDILLFLHADTLLPPTWEDEVKGAFAHHPSLLATAFRLRIMAPSSLFRVIEAGVSARSRWPWSMPYGDQALAVRRSVFEAVGGYPDVPVMEDFSFIQALHKMARTPPTSRPGGRDRQERKGGRVARQEGGRREETTEAGGLYGGKIRLLPSAVRTSARRWERLGVVRTTLVNQCMVLGWYVKVDPNKLAVFYR 287
            VE+IVVDGGSTD +  +A  LGA+VI +P+ GRA QMNLGA  A GDILLFLH DTLLP  ++ ++    +    ++A AF L+I       R++E  V+ RSRW +S+PYGDQ + ++ S+F  +GG+P++P+MEDF  IQ L K                                          GKI ++ +AV TSARRW++LGV +TTLVNQ +++G+Y+K+ P  L  FYR
Sbjct:   28 VEIIVVDGGSTDKTREIAEQLGAKVIISPSKGRAFQMNLGAKIAKGDILLFLHGDTLLPHEFQKQIINTLS-QSGIVAGAFELKIDGEEKTLRLVEKLVNWRSRW-FSLPYGDQGIFLKASIFADLGGFPELPIMEDFELIQRLKKR-----------------------------------------GKIAIVSAAVITSARRWQKLGVGKTTLVNQLVIIGYYLKIPPRLLKSFYR 222          
BLAST of EWM21655.1 vs. NCBI_GenBank
Match: gi|517209039|ref|WP_018397857.1| (hypothetical protein [filamentous cyanobacterium ESFC-1])

HSP 1 Score: 189.889 bits (481), Expect = 3.370e-55
Identity = 99/241 (41.08%), Postives = 143/241 (59.34%), Query Frame = 0
Query:   50 VEVIVVDGGSTDGSERVARALGARVIRAPTAGRARQMNLGAAAANGDILLFLHADTLLPPTWEDEVKGAFAHHPSLLATAFRLRIMAPSSLFRVIEAGVSARSRWPWSMPYGDQALAVRRSVFEAVGGYPDVPVMEDFSFIQALHKMARTPPTSRPGGRDRQERKGGRVARQEGGRREETTEAGGLYGGKIRLLPSAVRTSARRWERLGVVRTTLVNQCMVLGWYVKVDPNKLAVFYRQAR 290
            +E+I+VDGGS D +   A+ LG +V  +P  GRA QMN GA  A GDILLFLHADT LPP ++  ++ A A  P ++A AF+L I +P    R++E  V  RSR+ + +PYGDQAL + +  F+  GG+PD+P+MEDF F++ L          +P                                GKI L+P++V TSARRW++LGV +TT++NQ +VLG+++ V P +L  +YRQ +
Sbjct:   39 IEIIIVDGGSQDNTLECAQNLGVKVFFSPQPGRAAQMNFGATQATGDILLFLHADTQLPPHYDGLIRAALA-QPGVMAGAFQLGIDSPEMSLRLVEKMVIVRSRF-FQLPYGDQALFLTQETFKTCGGFPDLPIMEDFEFVRRL----------KP-------------------------------QGKIVLVPASVTTSARRWQKLGVFKTTIINQIIVLGYFLGVSPQQLRNWYRQQK 236          
BLAST of EWM21655.1 vs. NCBI_GenBank
Match: gi|488839828|ref|WP_002752234.1| (glycosyl transferase [Microcystis aeruginosa] >gi|389680140|emb|CCH91162.1| Similar to tr|Q116L6|Q116L6_TRIEI Glycosyl transferase [Microcystis aeruginosa PCC 9432])

HSP 1 Score: 189.119 bits (479), Expect = 3.668e-55
Identity = 98/238 (41.18%), Postives = 141/238 (59.24%), Query Frame = 0
Query:   50 VEVIVVDGGSTDGSERVARALGARVIRAPTAGRARQMNLGAAAANGDILLFLHADTLLPPTWEDEVKGAFAHHPSLLATAFRLRIMAPSSLFRVIEAGVSARSRWPWSMPYGDQALAVRRSVFEAVGGYPDVPVMEDFSFIQALHKMARTPPTSRPGGRDRQERKGGRVARQEGGRREETTEAGGLYGGKIRLLPSAVRTSARRWERLGVVRTTLVNQCMVLGWYVKVDPNKLAVFYR 287
            VE+IVVDGGSTD +  +A  LGA+VI +P+ GRA QMNLGA  A GDILLFLH DTLL   +++++    +    ++A +F L+I       R++E  V+ RSRW +S+PYGDQ + ++ S+   +GG+P++P+MEDF  IQ L K                                          GKI ++ +AV TSARRW++LGV +TTLVNQ +++G+Y+K+ P+ L  FYR
Sbjct:   28 VEIIVVDGGSTDKTREIAEKLGAKVIISPSKGRAFQMNLGAKIAKGDILLFLHGDTLLSQNYQEKIINTLS-QSGIVAGSFELKIDGEEKTLRLVEKLVNWRSRW-FSLPYGDQGIFLKASILTDLGGFPELPIMEDFELIQRLKKR-----------------------------------------GKIAIVSTAVITSARRWQKLGVAKTTLVNQLIIIGYYLKIPPHLLKNFYR 222          
BLAST of EWM21655.1 vs. NCBI_GenBank
Match: gi|640534899|ref|WP_024968581.1| (glycosyl transferase [Microcystis aeruginosa])

HSP 1 Score: 189.119 bits (479), Expect = 3.788e-55
Identity = 98/238 (41.18%), Postives = 141/238 (59.24%), Query Frame = 0
Query:   50 VEVIVVDGGSTDGSERVARALGARVIRAPTAGRARQMNLGAAAANGDILLFLHADTLLPPTWEDEVKGAFAHHPSLLATAFRLRIMAPSSLFRVIEAGVSARSRWPWSMPYGDQALAVRRSVFEAVGGYPDVPVMEDFSFIQALHKMARTPPTSRPGGRDRQERKGGRVARQEGGRREETTEAGGLYGGKIRLLPSAVRTSARRWERLGVVRTTLVNQCMVLGWYVKVDPNKLAVFYR 287
            VE+IVVDGGSTD +  +A  LGA+VI +P+ GRA QMNLGA  A GDILLFLH DTLL   +++++    +    ++A +F L+I       R++E  V+ RSRW +S+PYGDQ + ++ S+   +GG+P++P+MEDF  IQ L K                                          GKI ++ +AV TSARRW++LGV +TTLVNQ +++G+Y+K+ P+ L  FYR
Sbjct:   28 VEIIVVDGGSTDKTREIAEKLGAKVIISPSKGRAFQMNLGAKIAKGDILLFLHGDTLLSQNYQEKIINTLS-QSGIVAGSFELKIDGEEKTLRLVEKLVNWRSRW-FSLPYGDQGIFLKASILTDLGGFPELPIMEDFELIQRLKKR-----------------------------------------GKIAIVSTAVITSARRWQKLGVAKTTLVNQLIIIGYYLKIPPHLLKNFYR 222          
BLAST of EWM21655.1 vs. NCBI_GenBank
Match: gi|513836916|ref|WP_016514397.1| (poly-beta-1,6 N-acetyl-D-glucosamine synthase [Microcystis aeruginosa] >gi|513478107|gb|EPF24433.1| Poly-beta-1,6-N-acetyl-D-glucosamine synthase [Microcystis aeruginosa SPC777] >gi|513478751|gb|EPF24779.1| Poly-beta-1,6-N-acetyl-D-glucosamine synthase [Microcystis aeruginosa SPC777])

HSP 1 Score: 188.734 bits (478), Expect = 5.405e-55
Identity = 99/238 (41.60%), Postives = 141/238 (59.24%), Query Frame = 0
Query:   50 VEVIVVDGGSTDGSERVARALGARVIRAPTAGRARQMNLGAAAANGDILLFLHADTLLPPTWEDEVKGAFAHHPSLLATAFRLRIMAPSSLFRVIEAGVSARSRWPWSMPYGDQALAVRRSVFEAVGGYPDVPVMEDFSFIQALHKMARTPPTSRPGGRDRQERKGGRVARQEGGRREETTEAGGLYGGKIRLLPSAVRTSARRWERLGVVRTTLVNQCMVLGWYVKVDPNKLAVFYR 287
            VE+IVVDGGSTD +  +A  LGA+VI +P+ GRA QMNLGA  A GDILLFLH DTLLP  +++++    +    ++A AF L+I       R++E  V+ RS W +S+PYGDQ + ++ S+   +GG+P++P+MEDF  IQ L K                                          GKI ++ +AV TSARRW++LGV +TTLVNQ +++G+Y+K+ P+ L  FYR
Sbjct:   28 VEIIVVDGGSTDKTREIAEKLGAKVIISPSKGRAFQMNLGAKIAKGDILLFLHGDTLLPHEFQEQIINTLS-QSGIVAGAFELKIDGEEKNLRLVEKLVNWRSHW-FSLPYGDQGIFLKASILTDLGGFPELPIMEDFELIQRLKKR-----------------------------------------GKIAIVSTAVITSARRWQKLGVAKTTLVNQLIIIGYYLKIPPHLLKNFYR 222          
BLAST of EWM21655.1 vs. NCBI_GenBank
Match: gi|779876718|ref|WP_045359091.1| (glycosyl transferase [Microcystis aeruginosa] >gi|718249724|dbj|GAL93367.1| glycosyl transferase, family 2 [Microcystis aeruginosa NIES-44])

HSP 1 Score: 188.734 bits (478), Expect = 5.643e-55
Identity = 101/238 (42.44%), Postives = 142/238 (59.66%), Query Frame = 0
Query:   50 VEVIVVDGGSTDGSERVARALGARVIRAPTAGRARQMNLGAAAANGDILLFLHADTLLPPTWEDEVKGAFAHHPSLLATAFRLRIMAPSSLFRVIEAGVSARSRWPWSMPYGDQALAVRRSVFEAVGGYPDVPVMEDFSFIQALHKMARTPPTSRPGGRDRQERKGGRVARQEGGRREETTEAGGLYGGKIRLLPSAVRTSARRWERLGVVRTTLVNQCMVLGWYVKVDPNKLAVFYR 287
            VE+IVVDGGSTD +  +A  LGA+VI +P+ GRA QMNLGA  A GDILLFLH DTLLP  +++++    +    ++A AF L+I       R++E  V+ RSRW  S+PYGDQ + ++ S+F  +GG+P++P+MEDF  IQ L K                                          GKI ++ +AV TSARRW++LGV +TTLVNQ +++G+Y+K+ P+ L  FYR
Sbjct:   28 VEIIVVDGGSTDKTREIAEQLGAKVIISPSKGRAFQMNLGAKIAKGDILLFLHGDTLLPHEFQEQIINTLS-QSGIVAGAFELKIDGEEKPLRLVEKLVNWRSRW-LSLPYGDQGIFLKASIFADLGGFPELPIMEDFELIQRLKKR-----------------------------------------GKIAIVAAAVITSARRWQKLGVGKTTLVNQLIIIGYYLKIPPHLLKNFYR 222          
BLAST of EWM21655.1 vs. NCBI_GenBank
Match: gi|817700463|ref|WP_046662955.1| (glycosyl transferase [Microcystis aeruginosa] >gi|815966698|gb|AKE65843.1| glycosyl transferase, family 2 [Microcystis aeruginosa NIES-2549])

HSP 1 Score: 188.734 bits (478), Expect = 5.704e-55
Identity = 100/238 (42.02%), Postives = 140/238 (58.82%), Query Frame = 0
Query:   50 VEVIVVDGGSTDGSERVARALGARVIRAPTAGRARQMNLGAAAANGDILLFLHADTLLPPTWEDEVKGAFAHHPSLLATAFRLRIMAPSSLFRVIEAGVSARSRWPWSMPYGDQALAVRRSVFEAVGGYPDVPVMEDFSFIQALHKMARTPPTSRPGGRDRQERKGGRVARQEGGRREETTEAGGLYGGKIRLLPSAVRTSARRWERLGVVRTTLVNQCMVLGWYVKVDPNKLAVFYR 287
            VE+IVVDGGSTD +  +A  LGA+VI +P+ GRA QMNLGA  A GDILLFLH DTLLP  +++++    +   + +A AF L+I       R++E  V+ RSRW  S+PYGDQ + ++ S+   +GG+P++P+MEDF  IQ L K                                          GKI ++ +AV TSARRW++LGV +TTLVNQ +++G+Y+K+ P  L  FYR
Sbjct:   28 VEIIVVDGGSTDKTREIAEQLGAKVIISPSKGRAFQMNLGAKIAKGDILLFLHGDTLLPQNYQEQIINTLSQSGT-VAGAFELKIDGEEKTLRLVEKLVNWRSRWL-SLPYGDQGIFLKASILADLGGFPELPIMEDFELIQRLKKR-----------------------------------------GKIAIVAAAVITSARRWQKLGVGKTTLVNQLVIIGYYLKIPPRLLKSFYR 222          
The following BLAST results are available for this feature:
BLAST of EWM21655.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585101912|gb|EWM21655.1|0.000e+0100.00glycosyl transferase family 2 [Nannochloropsis gad... [more]
gi|506435744|ref|WP_015955461.1|1.068e-5542.80glycosyl transferase [Cyanothece sp. PCC 7424] >gi... [more]
gi|504955203|ref|WP_015142305.1|1.219e-5541.08glycosyl transferase [Pleurocapsa minor] >gi|42797... [more]
gi|1053287130|ref|WP_066030069.1|1.963e-5542.44glycosyltransferase [Microcystis aeruginosa] >gi|1... [more]
gi|517209039|ref|WP_018397857.1|3.370e-5541.08hypothetical protein [filamentous cyanobacterium E... [more]
gi|488839828|ref|WP_002752234.1|3.668e-5541.18glycosyl transferase [Microcystis aeruginosa] >gi|... [more]
gi|640534899|ref|WP_024968581.1|3.788e-5541.18glycosyl transferase [Microcystis aeruginosa][more]
gi|513836916|ref|WP_016514397.1|5.405e-5541.60poly-beta-1,6 N-acetyl-D-glucosamine synthase [Mic... [more]
gi|779876718|ref|WP_045359091.1|5.643e-5542.44glycosyl transferase [Microcystis aeruginosa] >gi|... [more]
gi|817700463|ref|WP_046662955.1|5.704e-5542.02glycosyl transferase [Microcystis aeruginosa] >gi|... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9047rna9047Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications